RNA–Protein interactions for RNA: ENST00000380763.7

HCCS-203, Transcript of holocytochrome c synthase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HCCS, Length 1,000 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCCS-203ENST00000380763 NISCHQ9Y2I1 1504 aa42.03■■■■■ 4.32
HCCS-203ENST00000380763 CCDC180Q9P1Z9 1646 aa37.63■■■■□ 3.61
HCCS-203ENST00000380763 ABCC9O60706 1549 aa37.44■■■■□ 3.58
HCCS-203ENST00000380763 RB1CC1Q8TDY2 1594 aa35.68■■■■□ 3.3
HCCS-203ENST00000380763 NACADO15069 1562 aa35.47■■■■□ 3.27
HCCS-203ENST00000380763 DCAF8L2P0C7V8 631 aa35.31■■■■□ 3.24
HCCS-203ENST00000380763 MYO15BQ96JP2 1530 aa35.03■■■■□ 3.2
HCCS-203ENST00000380763 UNC13AQ9UPW8 1703 aa34.99■■■■□ 3.19
HCCS-203ENST00000380763 ZCCHC6Q5VYS8 1495 aaKnown RBP34.91■■■■□ 3.18
HCCS-203ENST00000380763 DNAJC5BQ9UF47 199 aa34.91■■■■□ 3.18
HCCS-203ENST00000380763 PABPN1Q86U42 306 aaKnown RBP eCLIP34.86■■■■□ 3.17
HCCS-203ENST00000380763 BICRAQ9NZM4 1560 aa34.71■■■■□ 3.15
HCCS-203ENST00000380763 DCAF1Q9Y4B6 1507 aa34.69■■■■□ 3.14
HCCS-203ENST00000380763 SCRIBQ14160 1630 aa34.38■■■■□ 3.09
HCCS-203ENST00000380763 SHROOM4Q9ULL8 1493 aa34.15■■■■□ 3.06
HCCS-203ENST00000380763 CC2D2AQ9P2K1 1620 aa33.83■■■■□ 3.01
HCCS-203ENST00000380763 EIF4G1Q04637 1599 aaKnown RBP33.81■■■■□ 3
HCCS-203ENST00000380763 CECR2Q9BXF3 1484 aa33.67■■■□□ 2.98
HCCS-203ENST00000380763 SMARCA4P51532 1647 aa32.78■■■□□ 2.84
HCCS-203ENST00000380763 NCAPD3P42695 1498 aa32.74■■■□□ 2.83
HCCS-203ENST00000380763 ATAD2BQ9ULI0 1458 aa32.71■■■□□ 2.83
HCCS-203ENST00000380763 SMARCA2P51531 1590 aa32.61■■■□□ 2.81
HCCS-203ENST00000380763 BAZ1AQ9NRL2 1556 aaPredicted RBP32.59■■■□□ 2.81
HCCS-203ENST00000380763 HMGXB3Q12766 1538 aa32.56■■■□□ 2.8
HCCS-203ENST00000380763 MROH2BQ7Z745 1585 aa32.44■■■□□ 2.78
HCCS-203ENST00000380763 PEG3Q9GZU2 1588 aa32.42■■■□□ 2.78
HCCS-203ENST00000380763 BAZ1BQ9UIG0 1483 aaKnown RBP32.42■■■□□ 2.78
HCCS-203ENST00000380763 ERCC6Q03468 1493 aa32.27■■■□□ 2.76
HCCS-203ENST00000380763 NESP48681 1621 aa32.26■■■□□ 2.76
HCCS-203ENST00000380763 CUX2O14529 1486 aa32.11■■■□□ 2.73
HCCS-203ENST00000380763 WIZO95785 1651 aa32.07■■■□□ 2.72
HCCS-203ENST00000380763 LAMC3Q9Y6N6 1575 aa31.98■■■□□ 2.71
HCCS-203ENST00000380763 THOC2Q8NI27 1593 aaKnown RBP31.9■■■□□ 2.7
HCCS-203ENST00000380763 KIF21AQ7Z4S6 1674 aa31.87■■■□□ 2.69
HCCS-203ENST00000380763 RSF1Q96T23 1441 aaPredicted RBP31.81■■■□□ 2.68
HCCS-203ENST00000380763 DNAJC5Q9H3Z4 198 aa31.79■■■□□ 2.68
HCCS-203ENST00000380763 CADPSQ9ULU8 1353 aa31.75■■■□□ 2.67
HCCS-203ENST00000380763 PDS5BQ9NTI5 1447 aa31.75■■■□□ 2.67
HCCS-203ENST00000380763 TOP2AP11388 1531 aaKnown RBP31.65■■■□□ 2.66
HCCS-203ENST00000380763 MRC2Q9UBG0 1479 aa31.53■■■□□ 2.64
HCCS-203ENST00000380763 WDR62O43379 1518 aa31.47■■■□□ 2.63
HCCS-203ENST00000380763 CFTRP13569 1480 aa31.46■■■□□ 2.63
HCCS-203ENST00000380763 CEP164Q9UPV0 1460 aa31.45■■■□□ 2.62
HCCS-203ENST00000380763 FANCD2Q9BXW9 1451 aa31.44■■■□□ 2.62
HCCS-203ENST00000380763 CCDC88BA6NC98 1476 aa31.27■■■□□ 2.6
HCCS-203ENST00000380763 PRDM2Q13029 1718 aa31.23■■■□□ 2.59
HCCS-203ENST00000380763 URB2Q14146 1524 aaKnown RBP31.21■■■□□ 2.59
HCCS-203ENST00000380763 TOPBP1Q92547 1522 aa30.88■■■□□ 2.53
HCCS-203ENST00000380763 ZNF608Q9ULD9 1512 aaPredicted RBP30.79■■■□□ 2.52
HCCS-203ENST00000380763 DNMBPQ6XZF7 1577 aa30.79■■■□□ 2.52
HCCS-203ENST00000380763 IFT140Q96RY7 1462 aa30.78■■■□□ 2.52
HCCS-203ENST00000380763 ABCC8Q09428 1581 aa30.71■■■□□ 2.51
HCCS-203ENST00000380763 EIF4G3O43432 1585 aaKnown RBP30.66■■■□□ 2.5
HCCS-203ENST00000380763 TARBP1Q13395 1621 aaKnown RBP30.62■■■□□ 2.49
HCCS-203ENST00000380763 OSCARQ8IYS5 282 aa30.61■■■□□ 2.49
HCCS-203ENST00000380763 POLA1P09884 1462 aaPredicted RBP30.59■■■□□ 2.49
HCCS-203ENST00000380763 TRIM41Q8WV44 630 aa30.55■■■□□ 2.48
HCCS-203ENST00000380763 SUPT5HO00267 1087 aaKnown RBP30.53■■■□□ 2.48
HCCS-203ENST00000380763 AQRO60306 1485 aaKnown RBP eCLIP30.5■■■□□ 2.475e-6■■■□□ 16.9
HCCS-203ENST00000380763 RAD54L2Q9Y4B4 1467 aa30.49■■■□□ 2.47
HCCS-203ENST00000380763 CUX1P39880 1505 aa30.47■■■□□ 2.47
HCCS-203ENST00000380763 FGD5Q6ZNL6 1462 aa30.44■■■□□ 2.46
HCCS-203ENST00000380763 CHD1O14646 1710 aa30.39■■■□□ 2.45
HCCS-203ENST00000380763 SOGA1O94964 1423 aa30.39■■■□□ 2.45
HCCS-203ENST00000380763 TDRD9Q8NDG6 1382 aaKnown RBP30.34■■■□□ 2.45
HCCS-203ENST00000380763 RIMBP3CA6NJZ7 1639 aa30.33■■■□□ 2.45
HCCS-203ENST00000380763 RIMBP3BA6NNM3 1639 aa30.33■■■□□ 2.45
HCCS-203ENST00000380763 RIMBP3Q9UFD9 1639 aa30.33■■■□□ 2.45
HCCS-203ENST00000380763 WDR97A6NE52 1622 aa30.25■■■□□ 2.43
HCCS-203ENST00000380763 ARHGEF11O15085 1522 aa30.25■■■□□ 2.43
HCCS-203ENST00000380763 SNAPC4Q5SXM2 1469 aa30.23■■■□□ 2.43
HCCS-203ENST00000380763 FBLN2P98095 1184 aa30.19■■■□□ 2.42
HCCS-203ENST00000380763 GRIN2BQ13224 1484 aa30.12■■■□□ 2.41
HCCS-203ENST00000380763 PBRM1Q86U86 1689 aa30.11■■■□□ 2.41
HCCS-203ENST00000380763 MAGI1Q96QZ7 1491 aaPredicted RBP30.1■■■□□ 2.41
HCCS-203ENST00000380763 ABCA5Q8WWZ7 1642 aa30.07■■■□□ 2.4
HCCS-203ENST00000380763 ABCA10Q8WWZ4 1543 aa30.06■■■□□ 2.4
HCCS-203ENST00000380763 GAPVD1Q14C86 1478 aa30.05■■■□□ 2.4
HCCS-203ENST00000380763 SYNJ1O43426 1573 aa30.04■■■□□ 2.4
HCCS-203ENST00000380763 BIVM-ERCC5R4GMW8 1640 aa30.03■■■□□ 2.4
HCCS-203ENST00000380763 CLASP1Q7Z460 1538 aa30.01■■■□□ 2.4
HCCS-203ENST00000380763 TOP2BQ02880 1626 aa30.01■■■□□ 2.39
HCCS-203ENST00000380763 SYNJ2O15056 1496 aa30■■■□□ 2.39
HCCS-203ENST00000380763 ARAP1Q96P48 1450 aa29.99■■■□□ 2.39
HCCS-203ENST00000380763 WRNQ14191 1432 aaPredicted RBP eCLIP29.98■■■□□ 2.39
HCCS-203ENST00000380763 CHMP7Q8WUX9 453 aaPredicted RBP29.98■■■□□ 2.39
HCCS-203ENST00000380763 CYB5RLQ6IPT4 315 aa29.93■■■□□ 2.38
HCCS-203ENST00000380763 ADAMTS12P58397 1594 aa29.83■■■□□ 2.37
HCCS-203ENST00000380763 GRIN2AQ12879 1464 aa29.76■■■□□ 2.35
HCCS-203ENST00000380763 CEP170Q5SW79 1584 aa29.7■■■□□ 2.35
HCCS-203ENST00000380763 ERICH3Q5RHP9 1530 aa29.68■■■□□ 2.34
HCCS-203ENST00000380763 FHAD1B1AJZ9 1412 aa29.66■■■□□ 2.34
HCCS-203ENST00000380763 NUP160Q12769 1436 aa29.64■■■□□ 2.34
HCCS-203ENST00000380763 ERCC6L2Q5T890 1561 aa29.62■■■□□ 2.33
HCCS-203ENST00000380763 SHROOM2Q13796 1616 aa29.53■■■□□ 2.32
HCCS-203ENST00000380763 TRHP20396 242 aaPredicted RBP29.5■■■□□ 2.31
HCCS-203ENST00000380763 RUSC2Q8N2Y8 1516 aa29.41■■■□□ 2.3
HCCS-203ENST00000380763 KIF27Q86VH2 1401 aa29.36■■■□□ 2.29
HCCS-203ENST00000380763 IGF1RP08069 1367 aa29.34■■■□□ 2.29
HCCS-203ENST00000380763 PRG4Q92954 1404 aaPredicted RBP29.33■■■□□ 2.29
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms