RNA–Protein interactions for RNA: ENST00000380692.6

MSL3-205, Transcript of MSL complex subunit 3, humanhuman

TSL 3

Gene MSL3, Length 1,071 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSL3-205ENST00000380692 NISCHQ9Y2I1 1504 aa21.69■■□□□ 1.06
MSL3-205ENST00000380692 AEBP2Q6ZN18 517 aaPredicted RBP20.69■□□□□ 0.9
MSL3-205ENST00000380692 CHIC1Q5VXU3 224 aa20.1■□□□□ 0.81
MSL3-205ENST00000380692 CCDC180Q9P1Z9 1646 aa19.1■□□□□ 0.65
MSL3-205ENST00000380692 ABCC9O60706 1549 aa18.68■□□□□ 0.58
MSL3-205ENST00000380692 DCAF8L2P0C7V8 631 aa18.26■□□□□ 0.51
MSL3-205ENST00000380692 ZCCHC6Q5VYS8 1495 aaKnown RBP18.07■□□□□ 0.48
MSL3-205ENST00000380692 NACADO15069 1562 aa18■□□□□ 0.47
MSL3-205ENST00000380692 RB1CC1Q8TDY2 1594 aa17.98■□□□□ 0.47
MSL3-205ENST00000380692 MYO15BQ96JP2 1530 aa17.93■□□□□ 0.46
MSL3-205ENST00000380692 DCAF1Q9Y4B6 1507 aa17.92■□□□□ 0.46
MSL3-205ENST00000380692 PHF23Q9BUL5 403 aaPredicted RBP17.7■□□□□ 0.42
MSL3-205ENST00000380692 SENP3Q9H4L4 574 aaPredicted RBP17.59■□□□□ 0.41
MSL3-205ENST00000380692 PABPN1Q86U42 306 aaKnown RBP eCLIP17.57■□□□□ 0.4
MSL3-205ENST00000380692 SCRIBQ14160 1630 aa17.51■□□□□ 0.39
MSL3-205ENST00000380692 UNC13AQ9UPW8 1703 aa17.45■□□□□ 0.38
MSL3-205ENST00000380692 BICRAQ9NZM4 1560 aa17.4■□□□□ 0.38
MSL3-205ENST00000380692 SHROOM4Q9ULL8 1493 aa17.33■□□□□ 0.37
MSL3-205ENST00000380692 DNAJC5BQ9UF47 199 aa17.06■□□□□ 0.32
MSL3-205ENST00000380692 EIF4G1Q04637 1599 aaKnown RBP16.95■□□□□ 0.3
MSL3-205ENST00000380692 CECR2Q9BXF3 1484 aa16.91■□□□□ 0.3
MSL3-205ENST00000380692 CC2D2AQ9P2K1 1620 aa16.84■□□□□ 0.29
MSL3-205ENST00000380692 BAZ1AQ9NRL2 1556 aaPredicted RBP16.78■□□□□ 0.28
MSL3-205ENST00000380692 SMARCA4P51532 1647 aa16.74■□□□□ 0.27
MSL3-205ENST00000380692 MROH2BQ7Z745 1585 aa16.72■□□□□ 0.27
MSL3-205ENST00000380692 ATAD2BQ9ULI0 1458 aa16.67■□□□□ 0.26
MSL3-205ENST00000380692 NCAPD3P42695 1498 aa16.66■□□□□ 0.26
MSL3-205ENST00000380692 SMARCA2P51531 1590 aa16.64■□□□□ 0.25
MSL3-205ENST00000380692 RSF1Q96T23 1441 aaPredicted RBP16.62■□□□□ 0.25
MSL3-205ENST00000380692 PEG3Q9GZU2 1588 aa16.57■□□□□ 0.24
MSL3-205ENST00000380692 BAZ1BQ9UIG0 1483 aaKnown RBP16.55■□□□□ 0.24
MSL3-205ENST00000380692 WIZO95785 1651 aa16.52■□□□□ 0.23
MSL3-205ENST00000380692 HMGXB3Q12766 1538 aa16.51■□□□□ 0.23
MSL3-205ENST00000380692 SUPT5HO00267 1087 aaKnown RBP16.45■□□□□ 0.22
MSL3-205ENST00000380692 TOP2AP11388 1531 aaKnown RBP16.35■□□□□ 0.21
MSL3-205ENST00000380692 FOXD1Q16676 465 aa16.35■□□□□ 0.21
MSL3-205ENST00000380692 PLPPR3Q6T4P5 718 aa16.28■□□□□ 0.2
MSL3-205ENST00000380692 CCDC88BA6NC98 1476 aa16.22■□□□□ 0.19
MSL3-205ENST00000380692 CADPSQ9ULU8 1353 aa16.21■□□□□ 0.19
MSL3-205ENST00000380692 NESP48681 1621 aa16.19■□□□□ 0.18
MSL3-205ENST00000380692 LAMC3Q9Y6N6 1575 aa16.13■□□□□ 0.17
MSL3-205ENST00000380692 PDS5BQ9NTI5 1447 aa16.11■□□□□ 0.17
MSL3-205ENST00000380692 CFTRP13569 1480 aa16.1■□□□□ 0.17
MSL3-205ENST00000380692 ERCC6Q03468 1493 aa16.1■□□□□ 0.17
MSL3-205ENST00000380692 FANCD2Q9BXW9 1451 aa15.99■□□□□ 0.15
MSL3-205ENST00000380692 CEP164Q9UPV0 1460 aa15.94■□□□□ 0.14
MSL3-205ENST00000380692 KIF21AQ7Z4S6 1674 aa15.91■□□□□ 0.14
MSL3-205ENST00000380692 MRC2Q9UBG0 1479 aa15.88■□□□□ 0.13
MSL3-205ENST00000380692 PRDM2Q13029 1718 aa15.82■□□□□ 0.12
MSL3-205ENST00000380692 CUX2O14529 1486 aa15.82■□□□□ 0.12
MSL3-205ENST00000380692 THOC2Q8NI27 1593 aaKnown RBP15.82■□□□□ 0.12
MSL3-205ENST00000380692 POTEDQ86YR6 584 aa15.81■□□□□ 0.12
MSL3-205ENST00000380692 URB2Q14146 1524 aaKnown RBP15.79■□□□□ 0.12
MSL3-205ENST00000380692 WDR62O43379 1518 aa15.78■□□□□ 0.12
MSL3-205ENST00000380692 ABCC8Q09428 1581 aa15.77■□□□□ 0.11
MSL3-205ENST00000380692 TOPBP1Q92547 1522 aa15.73■□□□□ 0.11
MSL3-205ENST00000380692 DNMBPQ6XZF7 1577 aa15.7■□□□□ 0.1
MSL3-205ENST00000380692 WRNQ14191 1432 aaPredicted RBP eCLIP15.68■□□□□ 0.1
MSL3-205ENST00000380692 PPP6R1Q9UPN7 881 aa15.66■□□□□ 0.1
MSL3-205ENST00000380692 CUX1P39880 1505 aa15.66■□□□□ 0.1
MSL3-205ENST00000380692 ADRA2BP18089 450 aa15.65■□□□□ 0.1
MSL3-205ENST00000380692 SOGA1O94964 1423 aa15.62■□□□□ 0.09
MSL3-205ENST00000380692 POLA1P09884 1462 aaPredicted RBP15.61■□□□□ 0.09
MSL3-205ENST00000380692 IFT140Q96RY7 1462 aa15.61■□□□□ 0.09
MSL3-205ENST00000380692 FGD5Q6ZNL6 1462 aa15.6■□□□□ 0.09
MSL3-205ENST00000380692 RAD54L2Q9Y4B4 1467 aa15.58■□□□□ 0.08
MSL3-205ENST00000380692 MSH5O43196 834 aa15.57■□□□□ 0.08
MSL3-205ENST00000380692 TOP2BQ02880 1626 aa15.55■□□□□ 0.08
MSL3-205ENST00000380692 SYNJ1O43426 1573 aa15.55■□□□□ 0.08
MSL3-205ENST00000380692 ZNF608Q9ULD9 1512 aaPredicted RBP15.53■□□□□ 0.08
MSL3-205ENST00000380692 TDRD9Q8NDG6 1382 aaKnown RBP15.52■□□□□ 0.08
MSL3-205ENST00000380692 TRIM41Q8WV44 630 aa15.52■□□□□ 0.08
MSL3-205ENST00000380692 BIVM-ERCC5R4GMW8 1640 aa15.5■□□□□ 0.07
MSL3-205ENST00000380692 AQRO60306 1485 aaKnown RBP eCLIP15.5■□□□□ 0.07
MSL3-205ENST00000380692 TARBP1Q13395 1621 aaKnown RBP15.5■□□□□ 0.07
MSL3-205ENST00000380692 ABCA10Q8WWZ4 1543 aa15.45■□□□□ 0.06
MSL3-205ENST00000380692 GAPVD1Q14C86 1478 aa15.4■□□□□ 0.06
MSL3-205ENST00000380692 EIF4G3O43432 1585 aaKnown RBP15.4■□□□□ 0.06
MSL3-205ENST00000380692 FBLN2P98095 1184 aa15.37■□□□□ 0.05
MSL3-205ENST00000380692 PIAS4Q8N2W9 510 aaPredicted RBP15.37■□□□□ 0.05
MSL3-205ENST00000380692 GRIN2BQ13224 1484 aa15.37■□□□□ 0.05
MSL3-205ENST00000380692 WDR97A6NE52 1622 aa15.36■□□□□ 0.05
MSL3-205ENST00000380692 KIF27Q86VH2 1401 aa15.35■□□□□ 0.05
MSL3-205ENST00000380692 CHMP7Q8WUX9 453 aaPredicted RBP15.34■□□□□ 0.05
MSL3-205ENST00000380692 OSCARQ8IYS5 282 aa15.33■□□□□ 0.04
MSL3-205ENST00000380692 SNAPC4Q5SXM2 1469 aa15.31■□□□□ 0.04
MSL3-205ENST00000380692 ABCA5Q8WWZ7 1642 aa15.31■□□□□ 0.04
MSL3-205ENST00000380692 MAGI1Q96QZ7 1491 aaPredicted RBP15.29■□□□□ 0.04
MSL3-205ENST00000380692 IGF1RP08069 1367 aa15.29■□□□□ 0.04
MSL3-205ENST00000380692 ERICH3Q5RHP9 1530 aa15.26■□□□□ 0.03
MSL3-205ENST00000380692 DNAJC5Q9H3Z4 198 aa15.25■□□□□ 0.03
MSL3-205ENST00000380692 RUSC2Q8N2Y8 1516 aa15.25■□□□□ 0.03
MSL3-205ENST00000380692 SYNJ2O15056 1496 aa15.25■□□□□ 0.03
MSL3-205ENST00000380692 FHAD1B1AJZ9 1412 aa15.24■□□□□ 0.03
MSL3-205ENST00000380692 PBRM1Q86U86 1689 aa15.23■□□□□ 0.03
MSL3-205ENST00000380692 FAM9AQ8IZU1 332 aaPredicted RBP15.21■□□□□ 0.03
MSL3-205ENST00000380692 CARMIL1Q5VZK9 1371 aa15.21■□□□□ 0.02
MSL3-205ENST00000380692 CSRNP3Q8WYN3 585 aa15.2■□□□□ 0.02
MSL3-205ENST00000380692 ADAMTS12P58397 1594 aa15.16■□□□□ 0.02
MSL3-205ENST00000380692 GRIN2AQ12879 1464 aa15.15■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 79.3 ms