RNA–Protein interactions for RNA: ENST00000380327.9

TROAP-202, Transcript of trophinin associated protein, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TROAP, Length 675 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TROAP-202ENST00000380327 NISCHQ9Y2I1 1504 aa28.89■■■□□ 2.21
TROAP-202ENST00000380327 CCDC180Q9P1Z9 1646 aa25.98■■□□□ 1.75
TROAP-202ENST00000380327 ABCC9O60706 1549 aa25.86■■□□□ 1.73
TROAP-202ENST00000380327 RB1CC1Q8TDY2 1594 aa24.67■■□□□ 1.54
TROAP-202ENST00000380327 NACADO15069 1562 aa24.49■■□□□ 1.51
TROAP-202ENST00000380327 DCAF8L2P0C7V8 631 aa24.28■■□□□ 1.48
TROAP-202ENST00000380327 MYO15BQ96JP2 1530 aa24.16■■□□□ 1.46
TROAP-202ENST00000380327 UNC13AQ9UPW8 1703 aa24.12■■□□□ 1.45
TROAP-202ENST00000380327 DNAJC5BQ9UF47 199 aa24.09■■□□□ 1.45
TROAP-202ENST00000380327 PABPN1Q86U42 306 aaKnown RBP eCLIP24.01■■□□□ 1.43
TROAP-202ENST00000380327 ZCCHC6Q5VYS8 1495 aaKnown RBP23.99■■□□□ 1.43
TROAP-202ENST00000380327 BICRAQ9NZM4 1560 aa23.92■■□□□ 1.42
TROAP-202ENST00000380327 DCAF1Q9Y4B6 1507 aa23.87■■□□□ 1.41
TROAP-202ENST00000380327 SCRIBQ14160 1630 aa23.66■■□□□ 1.38
TROAP-202ENST00000380327 SHROOM4Q9ULL8 1493 aa23.64■■□□□ 1.38
TROAP-202ENST00000380327 CC2D2AQ9P2K1 1620 aa23.37■■□□□ 1.33
TROAP-202ENST00000380327 EIF4G1Q04637 1599 aaKnown RBP23.35■■□□□ 1.33
TROAP-202ENST00000380327 CECR2Q9BXF3 1484 aa23.29■■□□□ 1.32
TROAP-202ENST00000380327 SMARCA4P51532 1647 aa22.57■■□□□ 1.2
TROAP-202ENST00000380327 NCAPD3P42695 1498 aa22.56■■□□□ 1.2
TROAP-202ENST00000380327 ATAD2BQ9ULI0 1458 aa22.52■■□□□ 1.2
TROAP-202ENST00000380327 SMARCA2P51531 1590 aa22.5■■□□□ 1.19
TROAP-202ENST00000380327 HMGXB3Q12766 1538 aa22.47■■□□□ 1.19
TROAP-202ENST00000380327 BAZ1AQ9NRL2 1556 aaPredicted RBP22.46■■□□□ 1.19
TROAP-202ENST00000380327 ERCC6Q03468 1493 aa22.35■■□□□ 1.17
TROAP-202ENST00000380327 BAZ1BQ9UIG0 1483 aaKnown RBP22.34■■□□□ 1.17
TROAP-202ENST00000380327 PEG3Q9GZU2 1588 aa22.33■■□□□ 1.17
TROAP-202ENST00000380327 CUX2O14529 1486 aa22.28■■□□□ 1.16
TROAP-202ENST00000380327 MROH2BQ7Z745 1585 aa22.26■■□□□ 1.15
TROAP-202ENST00000380327 NESP48681 1621 aa22.22■■□□□ 1.15
TROAP-202ENST00000380327 LAMC3Q9Y6N6 1575 aa22.11■■□□□ 1.13
TROAP-202ENST00000380327 DNAJC5Q9H3Z4 198 aa22.09■■□□□ 1.13
TROAP-202ENST00000380327 THOC2Q8NI27 1593 aaKnown RBP22.04■■□□□ 1.12
TROAP-202ENST00000380327 WIZO95785 1651 aa22.02■■□□□ 1.12
TROAP-202ENST00000380327 KIF21AQ7Z4S6 1674 aa22■■□□□ 1.11
TROAP-202ENST00000380327 PDS5BQ9NTI5 1447 aa21.94■■□□□ 1.1
TROAP-202ENST00000380327 CADPSQ9ULU8 1353 aa21.87■■□□□ 1.09
TROAP-202ENST00000380327 RSF1Q96T23 1441 aaPredicted RBP21.79■■□□□ 1.08
TROAP-202ENST00000380327 MRC2Q9UBG0 1479 aa21.78■■□□□ 1.08
TROAP-202ENST00000380327 TOP2AP11388 1531 aaKnown RBP21.76■■□□□ 1.07
TROAP-202ENST00000380327 WDR62O43379 1518 aa21.74■■□□□ 1.07
TROAP-202ENST00000380327 CEP164Q9UPV0 1460 aa21.71■■□□□ 1.07
TROAP-202ENST00000380327 FANCD2Q9BXW9 1451 aa21.67■■□□□ 1.06
TROAP-202ENST00000380327 CFTRP13569 1480 aa21.66■■□□□ 1.06
TROAP-202ENST00000380327 PRDM2Q13029 1718 aa21.55■■□□□ 1.04
TROAP-202ENST00000380327 URB2Q14146 1524 aaKnown RBP21.49■■□□□ 1.03
TROAP-202ENST00000380327 CCDC88BA6NC98 1476 aa21.45■■□□□ 1.03
TROAP-202ENST00000380327 TOPBP1Q92547 1522 aa21.27■■□□□ 1
TROAP-202ENST00000380327 IFT140Q96RY7 1462 aa21.25■□□□□ 0.99
TROAP-202ENST00000380327 DNMBPQ6XZF7 1577 aa21.23■□□□□ 0.99
TROAP-202ENST00000380327 ABCC8Q09428 1581 aa21.21■□□□□ 0.99
TROAP-202ENST00000380327 ZNF608Q9ULD9 1512 aaPredicted RBP21.2■□□□□ 0.98
TROAP-202ENST00000380327 TRIM41Q8WV44 630 aa21.2■□□□□ 0.98
TROAP-202ENST00000380327 OSCARQ8IYS5 282 aa21.17■□□□□ 0.98
TROAP-202ENST00000380327 EIF4G3O43432 1585 aaKnown RBP21.17■□□□□ 0.98
TROAP-202ENST00000380327 TARBP1Q13395 1621 aaKnown RBP21.09■□□□□ 0.97
TROAP-202ENST00000380327 POLA1P09884 1462 aaPredicted RBP21.06■□□□□ 0.96
TROAP-202ENST00000380327 RIMBP3CA6NJZ7 1639 aa21■□□□□ 0.95
TROAP-202ENST00000380327 RIMBP3BA6NNM3 1639 aa21■□□□□ 0.95
TROAP-202ENST00000380327 RIMBP3Q9UFD9 1639 aa21■□□□□ 0.95
TROAP-202ENST00000380327 AQRO60306 1485 aaKnown RBP eCLIP21■□□□□ 0.954e-8■■■■□ 24.6
TROAP-202ENST00000380327 CHD1O14646 1710 aa20.98■□□□□ 0.95
TROAP-202ENST00000380327 RAD54L2Q9Y4B4 1467 aa20.95■□□□□ 0.94
TROAP-202ENST00000380327 FGD5Q6ZNL6 1462 aa20.94■□□□□ 0.94
TROAP-202ENST00000380327 ARHGEF11O15085 1522 aa20.94■□□□□ 0.94
TROAP-202ENST00000380327 CUX1P39880 1505 aa20.93■□□□□ 0.94
TROAP-202ENST00000380327 SOGA1O94964 1423 aa20.92■□□□□ 0.94
TROAP-202ENST00000380327 WDR97A6NE52 1622 aa20.91■□□□□ 0.94
TROAP-202ENST00000380327 TDRD9Q8NDG6 1382 aaKnown RBP20.86■□□□□ 0.93
TROAP-202ENST00000380327 SNAPC4Q5SXM2 1469 aa20.84■□□□□ 0.93
TROAP-202ENST00000380327 SUPT5HO00267 1087 aaKnown RBP20.84■□□□□ 0.93
TROAP-202ENST00000380327 FBLN2P98095 1184 aa20.84■□□□□ 0.93
TROAP-202ENST00000380327 MAGI1Q96QZ7 1491 aaPredicted RBP20.78■□□□□ 0.92
TROAP-202ENST00000380327 GRIN2BQ13224 1484 aa20.77■□□□□ 0.92
TROAP-202ENST00000380327 PBRM1Q86U86 1689 aa20.76■□□□□ 0.91
TROAP-202ENST00000380327 SYNJ1O43426 1573 aa20.72■□□□□ 0.91
TROAP-202ENST00000380327 ARAP1Q96P48 1450 aa20.72■□□□□ 0.91
TROAP-202ENST00000380327 CLASP1Q7Z460 1538 aa20.72■□□□□ 0.91
TROAP-202ENST00000380327 ABCA5Q8WWZ7 1642 aa20.71■□□□□ 0.91
TROAP-202ENST00000380327 SYNJ2O15056 1496 aa20.71■□□□□ 0.91
TROAP-202ENST00000380327 GAPVD1Q14C86 1478 aa20.69■□□□□ 0.9
TROAP-202ENST00000380327 ABCA10Q8WWZ4 1543 aa20.69■□□□□ 0.9
TROAP-202ENST00000380327 CYB5RLQ6IPT4 315 aa20.69■□□□□ 0.9
TROAP-202ENST00000380327 CHMP7Q8WUX9 453 aaPredicted RBP20.68■□□□□ 0.9
TROAP-202ENST00000380327 BIVM-ERCC5R4GMW8 1640 aa20.64■□□□□ 0.9
TROAP-202ENST00000380327 TOP2BQ02880 1626 aa20.63■□□□□ 0.89
TROAP-202ENST00000380327 WRNQ14191 1432 aaPredicted RBP eCLIP20.61■□□□□ 0.89
TROAP-202ENST00000380327 ADAMTS12P58397 1594 aa20.55■□□□□ 0.88
TROAP-202ENST00000380327 GRIN2AQ12879 1464 aa20.52■□□□□ 0.88
TROAP-202ENST00000380327 TRHP20396 242 aaPredicted RBP20.47■□□□□ 0.87
TROAP-202ENST00000380327 CEP170Q5SW79 1584 aa20.46■□□□□ 0.87
TROAP-202ENST00000380327 ERICH3Q5RHP9 1530 aa20.45■□□□□ 0.86
TROAP-202ENST00000380327 FHAD1B1AJZ9 1412 aa20.43■□□□□ 0.86
TROAP-202ENST00000380327 NUP160Q12769 1436 aa20.42■□□□□ 0.86
TROAP-202ENST00000380327 ERCC6L2Q5T890 1561 aa20.38■□□□□ 0.85
TROAP-202ENST00000380327 SHROOM2Q13796 1616 aa20.37■□□□□ 0.85
TROAP-202ENST00000380327 RUSC2Q8N2Y8 1516 aa20.28■□□□□ 0.84
TROAP-202ENST00000380327 PRG4Q92954 1404 aaPredicted RBP20.21■□□□□ 0.83
TROAP-202ENST00000380327 CUL7Q14999 1698 aa20.21■□□□□ 0.83
TROAP-202ENST00000380327 KIF27Q86VH2 1401 aa20.19■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 105.4 ms