RNA–Protein interactions for RNA: ENST00000379510.3

CNKSR2-202, Transcript of connector enhancer of kinase suppressor of Ras 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CNKSR2, Length 5,315 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNKSR2-202ENST00000379510 CHIC1Q5VXU3 224 aa10.57□□□□□ -0.72
CNKSR2-202ENST00000379510 AEBP2Q6ZN18 517 aaPredicted RBP10.39□□□□□ -0.75
CNKSR2-202ENST00000379510 EHMT2Q96KQ7 1210 aa10.01□□□□□ -0.81
CNKSR2-202ENST00000379510 SLC24A1O60721 1099 aa9.77□□□□□ -0.85
CNKSR2-202ENST00000379510 SENP3Q9H4L4 574 aaPredicted RBP9.48□□□□□ -0.89
CNKSR2-202ENST00000379510 RANGAP1P46060 587 aaPredicted RBP9.33□□□□□ -0.92
CNKSR2-202ENST00000379510 PHF23Q9BUL5 403 aaPredicted RBP9.25□□□□□ -0.93
CNKSR2-202ENST00000379510 DCAF8L2P0C7V8 631 aa9.24□□□□□ -0.93
CNKSR2-202ENST00000379510 AMER1Q5JTC6 1135 aaPredicted RBP9.12□□□□□ -0.95
CNKSR2-202ENST00000379510 MYT1Q01538 1121 aa9.08□□□□□ -0.96
CNKSR2-202ENST00000379510 PLPPR3Q6T4P5 718 aa9.07□□□□□ -0.96
CNKSR2-202ENST00000379510 SLC4A1APQ9BWU0 796 aaKnown RBP8.92□□□□□ -0.98
CNKSR2-202ENST00000379510 PELP1Q8IZL8 1130 aaKnown RBP8.9□□□□□ -0.98
CNKSR2-202ENST00000379510 ERICH6Q7L0X2 663 aa8.84□□□□□ -0.99
CNKSR2-202ENST00000379510 HAP1P54257 671 aaPredicted RBP8.83□□□□□ -1
CNKSR2-202ENST00000379510 RTN4Q9NQC3 1192 aaKnown RBP8.79□□□□□ -1
CNKSR2-202ENST00000379510 TTBK1Q5TCY1 1321 aaPredicted RBP8.73□□□□□ -1.01
CNKSR2-202ENST00000379510 KCNA4P22459 653 aa8.71□□□□□ -1.01
CNKSR2-202ENST00000379510 BCANQ96GW7 911 aa8.67□□□□□ -1.02
CNKSR2-202ENST00000379510 DAXXQ9UER7 740 aaPredicted RBP8.66□□□□□ -1.02
CNKSR2-202ENST00000379510 NCBP3Q53F19 620 aaKnown RBP8.64□□□□□ -1.03
CNKSR2-202ENST00000379510 MYT1LQ9UL68 1186 aa8.56□□□□□ -1.04
CNKSR2-202ENST00000379510 HOMEZQ8IX15 550 aa8.54□□□□□ -1.04
CNKSR2-202ENST00000379510 TPRNQ4KMQ1 711 aa8.51□□□□□ -1.05
CNKSR2-202ENST00000379510 C14orf37Q86TY3 774 aa8.49□□□□□ -1.05
CNKSR2-202ENST00000379510 CSRNP3Q8WYN3 585 aa8.48□□□□□ -1.05
CNKSR2-202ENST00000379510 NBR1Q14596 966 aa8.45□□□□□ -1.06
CNKSR2-202ENST00000379510 PRKCSHP14314 528 aaPredicted RBP8.43□□□□□ -1.06
CNKSR2-202ENST00000379510 TULP1O00294 542 aaPredicted RBP8.42□□□□□ -1.06
CNKSR2-202ENST00000379510 PIAS4Q8N2W9 510 aaPredicted RBP8.42□□□□□ -1.06
CNKSR2-202ENST00000379510 ZBTB4Q9P1Z0 1013 aaPredicted RBP8.41□□□□□ -1.06
CNKSR2-202ENST00000379510 FOXD1Q16676 465 aa8.41□□□□□ -1.06
CNKSR2-202ENST00000379510 FKBP8Q14318 412 aa8.39□□□□□ -1.07
CNKSR2-202ENST00000379510 ARXQ96QS3 562 aa8.39□□□□□ -1.07
CNKSR2-202ENST00000379510 PODXL2Q9NZ53 605 aa8.31□□□□□ -1.08
CNKSR2-202ENST00000379510 CFAP44Q96MT7 982 aa8.27□□□□□ -1.09
CNKSR2-202ENST00000379510 TAOK2Q9UL54 1235 aa8.27□□□□□ -1.09
CNKSR2-202ENST00000379510 ADRA2BP18089 450 aa8.27□□□□□ -1.09
CNKSR2-202ENST00000379510 POLR3GLQ9BT43 218 aa8.23□□□□□ -1.09
CNKSR2-202ENST00000379510 MSH5O43196 834 aa8.19□□□□□ -1.1
CNKSR2-202ENST00000379510 GTF3C3Q9Y5Q9 886 aa8.19□□□□□ -1.1
CNKSR2-202ENST00000379510 SCAF1Q9H7N4 1312 aaKnown RBP8.18□□□□□ -1.1
CNKSR2-202ENST00000379510 ATP1B4Q9UN42 357 aaPredicted RBP8.18□□□□□ -1.1
CNKSR2-202ENST00000379510 NPM2Q86SE8 214 aaKnown RBP8.16□□□□□ -1.1
CNKSR2-202ENST00000379510 PLCB2Q00722 1185 aa8.14□□□□□ -1.11
CNKSR2-202ENST00000379510 HMGB1P09429 215 aaKnown RBP8.11□□□□□ -1.11
CNKSR2-202ENST00000379510 KLHL34Q8N239 644 aa8.11□□□□□ -1.11
CNKSR2-202ENST00000379510 ARID3AQ99856 593 aa8.1□□□□□ -1.11
CNKSR2-202ENST00000379510 SUPT5HO00267 1087 aaKnown RBP8.09□□□□□ -1.11
CNKSR2-202ENST00000379510 PPP4R3CPQ6ZMV5 832 aa8.07□□□□□ -1.12
CNKSR2-202ENST00000379510 PAXIP1Q6ZW49 1069 aaPredicted RBP8.06□□□□□ -1.12
CNKSR2-202ENST00000379510 EIF5BO60841 1220 aaKnown RBP8.05□□□□□ -1.12
CNKSR2-202ENST00000379510 FAM9AQ8IZU1 332 aaPredicted RBP8.04□□□□□ -1.12
CNKSR2-202ENST00000379510 CDK11BP21127 795 aaKnown RBP8.04□□□□□ -1.12
CNKSR2-202ENST00000379510 CDK11AQ9UQ88 783 aaPredicted RBP8.04□□□□□ -1.12
CNKSR2-202ENST00000379510 VSIG10Q8N0Z9 540 aa8.03□□□□□ -1.12
CNKSR2-202ENST00000379510 ZBTB7CA1YPR0 619 aa8.02□□□□□ -1.13
CNKSR2-202ENST00000379510 TIMELESSQ9UNS1 1208 aa8□□□□□ -1.13
CNKSR2-202ENST00000379510 FOXD4L1Q9NU39 408 aa7.98□□□□□ -1.13
CNKSR2-202ENST00000379510 FBXO3Q9UK99 471 aa7.97□□□□□ -1.13
CNKSR2-202ENST00000379510 PPP6R1Q9UPN7 881 aa7.94□□□□□ -1.14
CNKSR2-202ENST00000379510 DCAF8L1A6NGE4 600 aa7.94□□□□□ -1.14
CNKSR2-202ENST00000379510 CCDC9Q9Y3X0 531 aaKnown RBP7.88□□□□□ -1.15
CNKSR2-202ENST00000379510 CCER1Q8TC90 406 aaPredicted RBP7.88□□□□□ -1.15
CNKSR2-202ENST00000379510 SPRYD3Q8NCJ5 442 aa7.81□□□□□ -1.16
CNKSR2-202ENST00000379510 PLEKHG5O94827 1062 aa7.8□□□□□ -1.16
CNKSR2-202ENST00000379510 PDIA4P13667 645 aaKnown RBP7.77□□□□□ -1.17
CNKSR2-202ENST00000379510 ECM2O94769 699 aaPredicted RBP7.76□□□□□ -1.17
CNKSR2-202ENST00000379510 YTHDC1Q96MU7 727 aaKnown RBP7.76□□□□□ -1.17
CNKSR2-202ENST00000379510 WDR70Q9NW82 654 aa7.75□□□□□ -1.17
CNKSR2-202ENST00000379510 TMEM132AQ24JP5 1023 aa7.74□□□□□ -1.17
CNKSR2-202ENST00000379510 ARID4BQ4LE39 1312 aaPredicted RBP7.73□□□□□ -1.17
CNKSR2-202ENST00000379510 NPM3O75607 178 aaKnown RBP7.71□□□□□ -1.17
CNKSR2-202ENST00000379510 NEUROD2Q15784 382 aa7.71□□□□□ -1.17
CNKSR2-202ENST00000379510 USP35Q9P2H5 1018 aa7.71□□□□□ -1.18
CNKSR2-202ENST00000379510 CIZ1Q9ULV3 898 aaPredicted RBP7.71□□□□□ -1.18
CNKSR2-202ENST00000379510 PLCD3Q8N3E9 789 aa7.66□□□□□ -1.18
CNKSR2-202ENST00000379510 CHGAP10645 457 aaKnown RBP7.65□□□□□ -1.18
CNKSR2-202ENST00000379510 AEBP1Q8IUX7 1158 aa7.63□□□□□ -1.19
CNKSR2-202ENST00000379510 BBXQ8WY36 941 aaPredicted RBP7.62□□□□□ -1.19
CNKSR2-202ENST00000379510 CNKSR2Q8WXI2 1034 aa7.61□□□□□ -1.19
CNKSR2-202ENST00000379510 HSP90B1P14625 803 aaKnown RBP7.6□□□□□ -1.19
CNKSR2-202ENST00000379510 NEFLP07196 543 aa7.59□□□□□ -1.19
CNKSR2-202ENST00000379510 SHROOM4Q9ULL8 1493 aa7.58□□□□□ -1.2
CNKSR2-202ENST00000379510 KRI1Q8N9T8 703 aaKnown RBP7.57□□□□□ -1.2
CNKSR2-202ENST00000379510 FBLN2P98095 1184 aa7.54□□□□□ -1.2
CNKSR2-202ENST00000379510 BCL11AQ9H165 835 aa7.54□□□□□ -1.2
CNKSR2-202ENST00000379510 RBM25P49756 843 aaKnown RBP7.53□□□□□ -1.2
CNKSR2-202ENST00000379510 RSPH6AQ9H0K4 717 aa7.53□□□□□ -1.2
CNKSR2-202ENST00000379510 PPM1GO15355 546 aaPredicted RBP7.52□□□□□ -1.21
CNKSR2-202ENST00000379510 PTMSP20962 102 aa7.52□□□□□ -1.21
CNKSR2-202ENST00000379510 ZNF326Q5BKZ1 582 aaKnown RBP7.51□□□□□ -1.21
CNKSR2-202ENST00000379510 GRWD1Q9BQ67 446 aaKnown RBP eCLIP7.51□□□□□ -1.21
CNKSR2-202ENST00000379510 TSHZ2Q9NRE2 1034 aa7.51□□□□□ -1.21
CNKSR2-202ENST00000379510 RAD21O60216 631 aa7.5□□□□□ -1.21
CNKSR2-202ENST00000379510 APLP2Q06481 763 aa7.49□□□□□ -1.21
CNKSR2-202ENST00000379510 ZBTB22O15209 634 aa7.49□□□□□ -1.21
CNKSR2-202ENST00000379510 TRIM26Q12899 539 aaPredicted RBP7.49□□□□□ -1.21
CNKSR2-202ENST00000379510 PPP1R1BQ9UD71 204 aaPredicted RBP7.48□□□□□ -1.21
CNKSR2-202ENST00000379510 FBXW7Q969H0 707 aa7.47□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms