RNA–Protein interactions for RNA: ENST00000379316.3

PDCD5-202, Transcript of programmed cell death 5, humanhuman

TSL 1 (best) BASIC

Gene PDCD5, Length 154 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDCD5-202ENST00000379316 NISCHQ9Y2I1 1504 aa34.14■■■■□ 3.06
PDCD5-202ENST00000379316 CCDC180Q9P1Z9 1646 aa30.59■■■□□ 2.49
PDCD5-202ENST00000379316 ABCC9O60706 1549 aa30.15■■■□□ 2.42
PDCD5-202ENST00000379316 RB1CC1Q8TDY2 1594 aa28.96■■■□□ 2.23
PDCD5-202ENST00000379316 NACADO15069 1562 aa28.83■■■□□ 2.21
PDCD5-202ENST00000379316 DCAF8L2P0C7V8 631 aa28.65■■■□□ 2.18
PDCD5-202ENST00000379316 MYO15BQ96JP2 1530 aa28.56■■■□□ 2.16
PDCD5-202ENST00000379316 ZCCHC6Q5VYS8 1495 aaKnown RBP28.36■■■□□ 2.13
PDCD5-202ENST00000379316 DCAF1Q9Y4B6 1507 aa28.28■■■□□ 2.12
PDCD5-202ENST00000379316 UNC13AQ9UPW8 1703 aa28.22■■■□□ 2.11
PDCD5-202ENST00000379316 PABPN1Q86U42 306 aaKnown RBP eCLIP28.07■■■□□ 2.08
PDCD5-202ENST00000379316 BICRAQ9NZM4 1560 aa27.99■■■□□ 2.07
PDCD5-202ENST00000379316 DNAJC5BQ9UF47 199 aa27.89■■■□□ 2.06
PDCD5-202ENST00000379316 SHROOM4Q9ULL8 1493 aa27.82■■■□□ 2.04
PDCD5-202ENST00000379316 SCRIBQ14160 1630 aa27.8■■■□□ 2.04
PDCD5-202ENST00000379316 EIF4G1Q04637 1599 aaKnown RBP27.32■■□□□ 1.96
PDCD5-202ENST00000379316 CC2D2AQ9P2K1 1620 aa27.29■■□□□ 1.96
PDCD5-202ENST00000379316 CECR2Q9BXF3 1484 aa27.16■■□□□ 1.94
PDCD5-202ENST00000379316 SMARCA4P51532 1647 aa26.58■■□□□ 1.85
PDCD5-202ENST00000379316 NCAPD3P42695 1498 aa26.56■■□□□ 1.84
PDCD5-202ENST00000379316 BAZ1AQ9NRL2 1556 aaPredicted RBP26.54■■□□□ 1.84
PDCD5-202ENST00000379316 SMARCA2P51531 1590 aa26.53■■□□□ 1.84
PDCD5-202ENST00000379316 ATAD2BQ9ULI0 1458 aa26.49■■□□□ 1.83
PDCD5-202ENST00000379316 HMGXB3Q12766 1538 aa26.43■■□□□ 1.82
PDCD5-202ENST00000379316 PEG3Q9GZU2 1588 aa26.34■■□□□ 1.81
PDCD5-202ENST00000379316 BAZ1BQ9UIG0 1483 aaKnown RBP26.3■■□□□ 1.8
PDCD5-202ENST00000379316 MROH2BQ7Z745 1585 aa26.27■■□□□ 1.8
PDCD5-202ENST00000379316 ERCC6Q03468 1493 aa26.1■■□□□ 1.77
PDCD5-202ENST00000379316 WIZO95785 1651 aa25.98■■□□□ 1.75
PDCD5-202ENST00000379316 LAMC3Q9Y6N6 1575 aa25.97■■□□□ 1.75
PDCD5-202ENST00000379316 NESP48681 1621 aa25.96■■□□□ 1.75
PDCD5-202ENST00000379316 CUX2O14529 1486 aa25.95■■□□□ 1.74
PDCD5-202ENST00000379316 RSF1Q96T23 1441 aaPredicted RBP25.85■■□□□ 1.73
PDCD5-202ENST00000379316 PDS5BQ9NTI5 1447 aa25.8■■□□□ 1.72
PDCD5-202ENST00000379316 CADPSQ9ULU8 1353 aa25.76■■□□□ 1.71
PDCD5-202ENST00000379316 TOP2AP11388 1531 aaKnown RBP25.73■■□□□ 1.71
PDCD5-202ENST00000379316 KIF21AQ7Z4S6 1674 aa25.7■■□□□ 1.7
PDCD5-202ENST00000379316 THOC2Q8NI27 1593 aaKnown RBP25.69■■□□□ 1.7
PDCD5-202ENST00000379316 CFTRP13569 1480 aa25.54■■□□□ 1.68
PDCD5-202ENST00000379316 MRC2Q9UBG0 1479 aa25.53■■□□□ 1.68
PDCD5-202ENST00000379316 CEP164Q9UPV0 1460 aa25.51■■□□□ 1.67
PDCD5-202ENST00000379316 DNAJC5Q9H3Z4 198 aa25.5■■□□□ 1.67
PDCD5-202ENST00000379316 FANCD2Q9BXW9 1451 aa25.47■■□□□ 1.67
PDCD5-202ENST00000379316 WDR62O43379 1518 aa25.45■■□□□ 1.66
PDCD5-202ENST00000379316 PRDM2Q13029 1718 aa25.38■■□□□ 1.65
PDCD5-202ENST00000379316 CCDC88BA6NC98 1476 aa25.38■■□□□ 1.65
PDCD5-202ENST00000379316 URB2Q14146 1524 aaKnown RBP25.2■■□□□ 1.62
PDCD5-202ENST00000379316 ABCC8Q09428 1581 aa25.1■■□□□ 1.61
PDCD5-202ENST00000379316 TOPBP1Q92547 1522 aa25.02■■□□□ 1.6
PDCD5-202ENST00000379316 DNMBPQ6XZF7 1577 aa24.99■■□□□ 1.59
PDCD5-202ENST00000379316 IFT140Q96RY7 1462 aa24.99■■□□□ 1.59
PDCD5-202ENST00000379316 SUPT5HO00267 1087 aaKnown RBP24.93■■□□□ 1.58
PDCD5-202ENST00000379316 ZNF608Q9ULD9 1512 aaPredicted RBP24.81■■□□□ 1.56
PDCD5-202ENST00000379316 OSCARQ8IYS5 282 aa24.8■■□□□ 1.56
PDCD5-202ENST00000379316 POLA1P09884 1462 aaPredicted RBP24.77■■□□□ 1.56
PDCD5-202ENST00000379316 EIF4G3O43432 1585 aaKnown RBP24.77■■□□□ 1.56
PDCD5-202ENST00000379316 TARBP1Q13395 1621 aaKnown RBP24.77■■□□□ 1.56
PDCD5-202ENST00000379316 SOGA1O94964 1423 aa24.69■■□□□ 1.54
PDCD5-202ENST00000379316 CUX1P39880 1505 aa24.67■■□□□ 1.54
PDCD5-202ENST00000379316 FGD5Q6ZNL6 1462 aa24.67■■□□□ 1.54
PDCD5-202ENST00000379316 WDR97A6NE52 1622 aa24.66■■□□□ 1.54
PDCD5-202ENST00000379316 AQRO60306 1485 aaKnown RBP eCLIP24.64■■□□□ 1.532e-9■■■■■ 26.8
PDCD5-202ENST00000379316 RAD54L2Q9Y4B4 1467 aa24.63■■□□□ 1.53
PDCD5-202ENST00000379316 TDRD9Q8NDG6 1382 aaKnown RBP24.55■■□□□ 1.52
PDCD5-202ENST00000379316 CHD1O14646 1710 aa24.52■■□□□ 1.52
PDCD5-202ENST00000379316 TRIM41Q8WV44 630 aa24.49■■□□□ 1.51
PDCD5-202ENST00000379316 GRIN2BQ13224 1484 aa24.46■■□□□ 1.51
PDCD5-202ENST00000379316 FBLN2P98095 1184 aa24.46■■□□□ 1.51
PDCD5-202ENST00000379316 MAGI1Q96QZ7 1491 aaPredicted RBP24.45■■□□□ 1.51
PDCD5-202ENST00000379316 SNAPC4Q5SXM2 1469 aa24.44■■□□□ 1.5
PDCD5-202ENST00000379316 ABCA10Q8WWZ4 1543 aa24.43■■□□□ 1.5
PDCD5-202ENST00000379316 WRNQ14191 1432 aaPredicted RBP eCLIP24.43■■□□□ 1.5
PDCD5-202ENST00000379316 BIVM-ERCC5R4GMW8 1640 aa24.43■■□□□ 1.5
PDCD5-202ENST00000379316 TOP2BQ02880 1626 aa24.42■■□□□ 1.5
PDCD5-202ENST00000379316 GAPVD1Q14C86 1478 aa24.41■■□□□ 1.5
PDCD5-202ENST00000379316 RIMBP3CA6NJZ7 1639 aa24.41■■□□□ 1.5
PDCD5-202ENST00000379316 RIMBP3BA6NNM3 1639 aa24.41■■□□□ 1.5
PDCD5-202ENST00000379316 RIMBP3Q9UFD9 1639 aa24.41■■□□□ 1.5
PDCD5-202ENST00000379316 PBRM1Q86U86 1689 aa24.39■■□□□ 1.49
PDCD5-202ENST00000379316 ARHGEF11O15085 1522 aa24.37■■□□□ 1.49
PDCD5-202ENST00000379316 CHMP7Q8WUX9 453 aaPredicted RBP24.37■■□□□ 1.49
PDCD5-202ENST00000379316 ABCA5Q8WWZ7 1642 aa24.36■■□□□ 1.49
PDCD5-202ENST00000379316 SYNJ1O43426 1573 aa24.34■■□□□ 1.49
PDCD5-202ENST00000379316 SYNJ2O15056 1496 aa24.34■■□□□ 1.49
PDCD5-202ENST00000379316 CLASP1Q7Z460 1538 aa24.23■■□□□ 1.47
PDCD5-202ENST00000379316 ERICH3Q5RHP9 1530 aa24.16■■□□□ 1.46
PDCD5-202ENST00000379316 ADAMTS12P58397 1594 aa24.16■■□□□ 1.46
PDCD5-202ENST00000379316 CYB5RLQ6IPT4 315 aa24.15■■□□□ 1.46
PDCD5-202ENST00000379316 GRIN2AQ12879 1464 aa24.13■■□□□ 1.45
PDCD5-202ENST00000379316 FHAD1B1AJZ9 1412 aa24.12■■□□□ 1.45
PDCD5-202ENST00000379316 ARAP1Q96P48 1450 aa24.12■■□□□ 1.45
PDCD5-202ENST00000379316 NUP160Q12769 1436 aa24.02■■□□□ 1.44
PDCD5-202ENST00000379316 CEP170Q5SW79 1584 aa23.99■■□□□ 1.43
PDCD5-202ENST00000379316 KIF27Q86VH2 1401 aa23.98■■□□□ 1.43
PDCD5-202ENST00000379316 CUL7Q14999 1698 aa23.9■■□□□ 1.42
PDCD5-202ENST00000379316 SHROOM2Q13796 1616 aa23.9■■□□□ 1.42
PDCD5-202ENST00000379316 IGF1RP08069 1367 aa23.84■■□□□ 1.41
PDCD5-202ENST00000379316 TRHP20396 242 aaPredicted RBP23.82■■□□□ 1.4
PDCD5-202ENST00000379316 RUSC2Q8N2Y8 1516 aa23.81■■□□□ 1.4
PDCD5-202ENST00000379316 ERCC6L2Q5T890 1561 aa23.8■■□□□ 1.4
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms