RNA–Protein interactions for RNA: ENST00000379235.5

UBAP2-203, Transcript of ubiquitin associated protein 2, humanhuman

TSL 1 (best)

Gene UBAP2, Length 2,673 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBAP2-203ENST00000379235 NISCHQ9Y2I1 1504 aa21.73■■□□□ 1.07
UBAP2-203ENST00000379235 HRCP23327 699 aa19■□□□□ 0.63
UBAP2-203ENST00000379235 SHROOM4Q9ULL8 1493 aa18.95■□□□□ 0.62
UBAP2-203ENST00000379235 SUPT5HO00267 1087 aaKnown RBP18.82■□□□□ 0.6
UBAP2-203ENST00000379235 MYO15BQ96JP2 1530 aa18.75■□□□□ 0.59
UBAP2-203ENST00000379235 CHIC1Q5VXU3 224 aa18.59■□□□□ 0.57
UBAP2-203ENST00000379235 PCGF6Q9BYE7 350 aa18.57■□□□□ 0.56
UBAP2-203ENST00000379235 PPARGC1BQ86YN6 1023 aaKnown RBP18.53■□□□□ 0.56
UBAP2-203ENST00000379235 ZCCHC6Q5VYS8 1495 aaKnown RBP18.52■□□□□ 0.55
UBAP2-203ENST00000379235 DCAF1Q9Y4B6 1507 aa18.38■□□□□ 0.53
UBAP2-203ENST00000379235 CCDC180Q9P1Z9 1646 aa18.18■□□□□ 0.5
UBAP2-203ENST00000379235 PELP1Q8IZL8 1130 aaKnown RBP18.15■□□□□ 0.5
UBAP2-203ENST00000379235 TRIM26Q12899 539 aaPredicted RBP18.08■□□□□ 0.48
UBAP2-203ENST00000379235 LOC105371045A0A1W2PR82 267 aa18.07■□□□□ 0.48
UBAP2-203ENST00000379235 ABCC9O60706 1549 aa17.98■□□□□ 0.47
UBAP2-203ENST00000379235 ZEB1P37275 1124 aaPredicted RBP17.91■□□□□ 0.46
UBAP2-203ENST00000379235 SCAF1Q9H7N4 1312 aaKnown RBP17.88■□□□□ 0.45
UBAP2-203ENST00000379235 SLC24A1O60721 1099 aa17.85■□□□□ 0.45
UBAP2-203ENST00000379235 DCAF8L2P0C7V8 631 aa17.8■□□□□ 0.44
UBAP2-203ENST00000379235 ACIN1Q9UKV3 1341 aaKnown RBP17.49■□□□□ 0.39
UBAP2-203ENST00000379235 TRIM41Q8WV44 630 aa17.46■□□□□ 0.39
UBAP2-203ENST00000379235 RSF1Q96T23 1441 aaPredicted RBP17.43■□□□□ 0.38
UBAP2-203ENST00000379235 NEUROD1Q13562 356 aa17.42■□□□□ 0.38
UBAP2-203ENST00000379235 MYT1Q01538 1121 aa17.41■□□□□ 0.38
UBAP2-203ENST00000379235 FAM9AQ8IZU1 332 aaPredicted RBP17.37■□□□□ 0.37
UBAP2-203ENST00000379235 RB1CC1Q8TDY2 1594 aa17.36■□□□□ 0.37
UBAP2-203ENST00000379235 GTF3C3Q9Y5Q9 886 aa17.29■□□□□ 0.36
UBAP2-203ENST00000379235 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.25■□□□□ 0.35
UBAP2-203ENST00000379235 CENPBP07199 599 aaPredicted RBP17.24■□□□□ 0.35
UBAP2-203ENST00000379235 CCER1Q8TC90 406 aaPredicted RBP17.22■□□□□ 0.35
UBAP2-203ENST00000379235 DIEXFQ68CQ4 756 aaKnown RBP17.22■□□□□ 0.35
UBAP2-203ENST00000379235 EHMT2Q96KQ7 1210 aa17.21■□□□□ 0.35
UBAP2-203ENST00000379235 DNAJC5BQ9UF47 199 aa17.2■□□□□ 0.34
UBAP2-203ENST00000379235 SCRIBQ14160 1630 aa17.18■□□□□ 0.34
UBAP2-203ENST00000379235 WRNQ14191 1432 aaPredicted RBP eCLIP17■□□□□ 0.31
UBAP2-203ENST00000379235 NACADO15069 1562 aa16.95■□□□□ 0.3
UBAP2-203ENST00000379235 EIF4G1Q04637 1599 aaKnown RBP16.95■□□□□ 0.3
UBAP2-203ENST00000379235 MROH2BQ7Z745 1585 aa16.95■□□□□ 0.3
UBAP2-203ENST00000379235 CECR2Q9BXF3 1484 aa16.95■□□□□ 0.3
UBAP2-203ENST00000379235 ZNF316A6NFI3 1004 aaPredicted RBP16.94■□□□□ 0.3
UBAP2-203ENST00000379235 WIZO95785 1651 aa16.88■□□□□ 0.29
UBAP2-203ENST00000379235 CEP162Q5TB80 1403 aa16.85■□□□□ 0.29
UBAP2-203ENST00000379235 YTHDC1Q96MU7 727 aaKnown RBP16.85■□□□□ 0.29
UBAP2-203ENST00000379235 BAZ1AQ9NRL2 1556 aaPredicted RBP16.83■□□□□ 0.28
UBAP2-203ENST00000379235 TTBK1Q5TCY1 1321 aaPredicted RBP16.82■□□□□ 0.28
UBAP2-203ENST00000379235 PABPN1Q86U42 306 aaKnown RBP eCLIP16.82■□□□□ 0.28
UBAP2-203ENST00000379235 MIER1Q8N108 512 aa16.79■□□□□ 0.28
UBAP2-203ENST00000379235 TNIKQ9UKE5 1360 aa16.77■□□□□ 0.27
UBAP2-203ENST00000379235 UNC13AQ9UPW8 1703 aa16.75■□□□□ 0.27
UBAP2-203ENST00000379235 CCDC88BA6NC98 1476 aa16.75■□□□□ 0.27
UBAP2-203ENST00000379235 ABCC8Q09428 1581 aa16.72■□□□□ 0.27
UBAP2-203ENST00000379235 SOGA1O94964 1423 aa16.67■□□□□ 0.26
UBAP2-203ENST00000379235 BICRAQ9NZM4 1560 aa16.66■□□□□ 0.26
UBAP2-203ENST00000379235 EEA1Q15075 1411 aa16.63■□□□□ 0.25
UBAP2-203ENST00000379235 TOP2AP11388 1531 aaKnown RBP16.61■□□□□ 0.25
UBAP2-203ENST00000379235 CLSPNQ9HAW4 1339 aa16.58■□□□□ 0.24
UBAP2-203ENST00000379235 CSRNP3Q8WYN3 585 aa16.58■□□□□ 0.24
UBAP2-203ENST00000379235 GOLGA3Q08378 1498 aa16.57■□□□□ 0.24
UBAP2-203ENST00000379235 RUSC2Q8N2Y8 1516 aa16.57■□□□□ 0.24
UBAP2-203ENST00000379235 DAXXQ9UER7 740 aaPredicted RBP16.56■□□□□ 0.24
UBAP2-203ENST00000379235 SMARCA2P51531 1590 aa16.55■□□□□ 0.24
UBAP2-203ENST00000379235 UBTFP17480 764 aaKnown RBP16.54■□□□□ 0.24
UBAP2-203ENST00000379235 HNRNPUL2Q1KMD3 747 aaKnown RBP16.54■□□□□ 0.24
UBAP2-203ENST00000379235 SUPT16HQ9Y5B9 1047 aaKnown RBP16.53■□□□□ 0.24
UBAP2-203ENST00000379235 PRKCSHP14314 528 aaPredicted RBP16.47■□□□□ 0.23
UBAP2-203ENST00000379235 TSHZ2Q9NRE2 1034 aa16.44■□□□□ 0.22
UBAP2-203ENST00000379235 SMARCA4P51532 1647 aa16.44■□□□□ 0.22
UBAP2-203ENST00000379235 VPS8Q8N3P4 1428 aa16.42■□□□□ 0.22
UBAP2-203ENST00000379235 CEP164Q9UPV0 1460 aa16.41■□□□□ 0.22
UBAP2-203ENST00000379235 KIF21BO75037 1637 aa16.41■□□□□ 0.22
UBAP2-203ENST00000379235 ANP32EQ9BTT0 268 aa16.41■□□□□ 0.22
UBAP2-203ENST00000379235 CLIP1P30622 1438 aa16.41■□□□□ 0.22
UBAP2-203ENST00000379235 APLP2Q06481 763 aa16.39■□□□□ 0.21
UBAP2-203ENST00000379235 DHX57Q6P158 1386 aaKnown RBP16.35■□□□□ 0.21
UBAP2-203ENST00000379235 BAZ1BQ9UIG0 1483 aaKnown RBP16.31■□□□□ 0.2
UBAP2-203ENST00000379235 BCL11AQ9H165 835 aa16.28■□□□□ 0.2
UBAP2-203ENST00000379235 ERICH6Q7L0X2 663 aa16.27■□□□□ 0.2
UBAP2-203ENST00000379235 SYNJ1O43426 1573 aa16.27■□□□□ 0.2
UBAP2-203ENST00000379235 RAPGEF2Q9Y4G8 1499 aa16.24■□□□□ 0.19
UBAP2-203ENST00000379235 CC2D2AQ9P2K1 1620 aa16.21■□□□□ 0.19
UBAP2-203ENST00000379235 CUX2O14529 1486 aa16.16■□□□□ 0.18
UBAP2-203ENST00000379235 KCNH8Q96L42 1107 aa16.14■□□□□ 0.17
UBAP2-203ENST00000379235 RRBP1Q9P2E9 1410 aaKnown RBP16.13■□□□□ 0.17
UBAP2-203ENST00000379235 ARAP1Q96P48 1450 aa16.11■□□□□ 0.17
UBAP2-203ENST00000379235 BCANQ96GW7 911 aa16.1■□□□□ 0.17
UBAP2-203ENST00000379235 PEG3Q9GZU2 1588 aa16.09■□□□□ 0.17
UBAP2-203ENST00000379235 RANGAP1P46060 587 aaPredicted RBP16.08■□□□□ 0.16
UBAP2-203ENST00000379235 KANK4Q5T7N3 995 aaPredicted RBP16.08■□□□□ 0.16
UBAP2-203ENST00000379235 FKBP8Q14318 412 aa16.07■□□□□ 0.16
UBAP2-203ENST00000379235 ERICH3Q5RHP9 1530 aa16.04■□□□□ 0.16
UBAP2-203ENST00000379235 RBM19Q9Y4C8 960 aaKnown RBP16.03■□□□□ 0.16
UBAP2-203ENST00000379235 MAPKBP1O60336 1514 aa16.03■□□□□ 0.16
UBAP2-203ENST00000379235 PRXQ9BXM0 1461 aa16.01■□□□□ 0.15
UBAP2-203ENST00000379235 CCNB3Q8WWL7 1395 aa16■□□□□ 0.15
UBAP2-203ENST00000379235 TOP2BQ02880 1626 aa16■□□□□ 0.15
UBAP2-203ENST00000379235 RAB3GAP2Q9H2M9 1393 aa15.95■□□□□ 0.14
UBAP2-203ENST00000379235 NEFLP07196 543 aa15.93■□□□□ 0.14
UBAP2-203ENST00000379235 BIVM-ERCC5R4GMW8 1640 aa15.93■□□□□ 0.14
UBAP2-203ENST00000379235 DDX10Q13206 875 aaKnown RBP15.92■□□□□ 0.14
UBAP2-203ENST00000379235 DNAJC5Q9H3Z4 198 aa15.92■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms