RNA–Protein interactions for RNA: ENST00000379132.8

PAX6-208, Transcript of paired box 6, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene PAX6, Length 2,576 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAX6-208ENST00000379132 NISCHQ9Y2I1 1504 aa22.51■■□□□ 1.19
PAX6-208ENST00000379132 HRCP23327 699 aa19.8■□□□□ 0.76
PAX6-208ENST00000379132 CCDC180Q9P1Z9 1646 aa19.41■□□□□ 0.7
PAX6-208ENST00000379132 PPARGC1BQ86YN6 1023 aaKnown RBP19.4■□□□□ 0.7
PAX6-208ENST00000379132 PELP1Q8IZL8 1130 aaKnown RBP19.38■□□□□ 0.69
PAX6-208ENST00000379132 PCGF6Q9BYE7 350 aa19.34■□□□□ 0.69
PAX6-208ENST00000379132 DCAF8L2P0C7V8 631 aa19.33■□□□□ 0.68
PAX6-208ENST00000379132 SUPT5HO00267 1087 aaKnown RBP19.24■□□□□ 0.67
PAX6-208ENST00000379132 SHROOM4Q9ULL8 1493 aa19.2■□□□□ 0.66
PAX6-208ENST00000379132 ABCC9O60706 1549 aa19.15■□□□□ 0.66
PAX6-208ENST00000379132 MYO15BQ96JP2 1530 aa19.08■□□□□ 0.64
PAX6-208ENST00000379132 CHIC1Q5VXU3 224 aa18.96■□□□□ 0.63
PAX6-208ENST00000379132 SCAF1Q9H7N4 1312 aaKnown RBP18.84■□□□□ 0.61
PAX6-208ENST00000379132 ZCCHC6Q5VYS8 1495 aaKnown RBP18.82■□□□□ 0.6
PAX6-208ENST00000379132 DCAF1Q9Y4B6 1507 aa18.72■□□□□ 0.59
PAX6-208ENST00000379132 MYT1Q01538 1121 aa18.67■□□□□ 0.58
PAX6-208ENST00000379132 TRIM26Q12899 539 aaPredicted RBP18.66■□□□□ 0.58
PAX6-208ENST00000379132 LOC105371045A0A1W2PR82 267 aa18.57■□□□□ 0.56
PAX6-208ENST00000379132 ZEB1P37275 1124 aaPredicted RBP18.57■□□□□ 0.56
PAX6-208ENST00000379132 ACIN1Q9UKV3 1341 aaKnown RBP18.33■□□□□ 0.52
PAX6-208ENST00000379132 SCRIBQ14160 1630 aa18.29■□□□□ 0.52
PAX6-208ENST00000379132 NEUROD1Q13562 356 aa18.27■□□□□ 0.51
PAX6-208ENST00000379132 NACADO15069 1562 aa18.24■□□□□ 0.51
PAX6-208ENST00000379132 PABPN1Q86U42 306 aaKnown RBP eCLIP18.23■□□□□ 0.51
PAX6-208ENST00000379132 GTF3C3Q9Y5Q9 886 aa18.2■□□□□ 0.5
PAX6-208ENST00000379132 RB1CC1Q8TDY2 1594 aa18.19■□□□□ 0.5
PAX6-208ENST00000379132 CENPBP07199 599 aaPredicted RBP18.09■□□□□ 0.49
PAX6-208ENST00000379132 SLC24A1O60721 1099 aa18.02■□□□□ 0.48
PAX6-208ENST00000379132 DIEXFQ68CQ4 756 aaKnown RBP17.93■□□□□ 0.46
PAX6-208ENST00000379132 UNC13AQ9UPW8 1703 aa17.9■□□□□ 0.46
PAX6-208ENST00000379132 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.86■□□□□ 0.45
PAX6-208ENST00000379132 CCER1Q8TC90 406 aaPredicted RBP17.85■□□□□ 0.45
PAX6-208ENST00000379132 FAM9AQ8IZU1 332 aaPredicted RBP17.8■□□□□ 0.44
PAX6-208ENST00000379132 BICRAQ9NZM4 1560 aa17.78■□□□□ 0.44
PAX6-208ENST00000379132 CECR2Q9BXF3 1484 aa17.78■□□□□ 0.44
PAX6-208ENST00000379132 TRIM41Q8WV44 630 aa17.76■□□□□ 0.43
PAX6-208ENST00000379132 EHMT2Q96KQ7 1210 aa17.75■□□□□ 0.43
PAX6-208ENST00000379132 YTHDC1Q96MU7 727 aaKnown RBP17.69■□□□□ 0.42
PAX6-208ENST00000379132 MROH2BQ7Z745 1585 aa17.54■□□□□ 0.4
PAX6-208ENST00000379132 ZNF316A6NFI3 1004 aaPredicted RBP17.54■□□□□ 0.4
PAX6-208ENST00000379132 TTBK1Q5TCY1 1321 aaPredicted RBP17.53■□□□□ 0.4
PAX6-208ENST00000379132 RSF1Q96T23 1441 aaPredicted RBP17.52■□□□□ 0.4
PAX6-208ENST00000379132 MIER1Q8N108 512 aa17.45■□□□□ 0.38
PAX6-208ENST00000379132 BCL11AQ9H165 835 aa17.45■□□□□ 0.38
PAX6-208ENST00000379132 WIZO95785 1651 aa17.39■□□□□ 0.37
PAX6-208ENST00000379132 ANP32EQ9BTT0 268 aa17.37■□□□□ 0.37
PAX6-208ENST00000379132 SMARCA4P51532 1647 aa17.32■□□□□ 0.36
PAX6-208ENST00000379132 BAZ1AQ9NRL2 1556 aaPredicted RBP17.32■□□□□ 0.36
PAX6-208ENST00000379132 AEBP2Q6ZN18 517 aaPredicted RBP17.3■□□□□ 0.36
PAX6-208ENST00000379132 DNAJC5BQ9UF47 199 aa17.29■□□□□ 0.36
PAX6-208ENST00000379132 EIF4G1Q04637 1599 aaKnown RBP17.27■□□□□ 0.35
PAX6-208ENST00000379132 SUPT16HQ9Y5B9 1047 aaKnown RBP17.27■□□□□ 0.35
PAX6-208ENST00000379132 TSHZ2Q9NRE2 1034 aa17.24■□□□□ 0.35
PAX6-208ENST00000379132 CLSPNQ9HAW4 1339 aa17.21■□□□□ 0.34
PAX6-208ENST00000379132 CSRNP3Q8WYN3 585 aa17.19■□□□□ 0.34
PAX6-208ENST00000379132 ATAD2BQ9ULI0 1458 aa17.17■□□□□ 0.34
PAX6-208ENST00000379132 WRNQ14191 1432 aaPredicted RBP eCLIP17.11■□□□□ 0.33
PAX6-208ENST00000379132 CC2D2AQ9P2K1 1620 aa17.11■□□□□ 0.33
PAX6-208ENST00000379132 BAZ1BQ9UIG0 1483 aaKnown RBP17.06■□□□□ 0.32
PAX6-208ENST00000379132 CCDC88BA6NC98 1476 aa17.01■□□□□ 0.31
PAX6-208ENST00000379132 HNRNPUL2Q1KMD3 747 aaKnown RBP17.01■□□□□ 0.31
PAX6-208ENST00000379132 CEP162Q5TB80 1403 aa17■□□□□ 0.31
PAX6-208ENST00000379132 TOP2AP11388 1531 aaKnown RBP16.99■□□□□ 0.31
PAX6-208ENST00000379132 SMARCA2P51531 1590 aa16.98■□□□□ 0.31
PAX6-208ENST00000379132 NCAPD3P42695 1498 aa16.94■□□□□ 0.3
PAX6-208ENST00000379132 PEG3Q9GZU2 1588 aa16.94■□□□□ 0.3
PAX6-208ENST00000379132 BCANQ96GW7 911 aa16.9■□□□□ 0.3
PAX6-208ENST00000379132 TNIKQ9UKE5 1360 aa16.87■□□□□ 0.29
PAX6-208ENST00000379132 PLPPR3Q6T4P5 718 aa16.86■□□□□ 0.29
PAX6-208ENST00000379132 UBTFP17480 764 aaKnown RBP16.84■□□□□ 0.29
PAX6-208ENST00000379132 RBM19Q9Y4C8 960 aaKnown RBP16.83■□□□□ 0.28
PAX6-208ENST00000379132 PRKCSHP14314 528 aaPredicted RBP16.82■□□□□ 0.28
PAX6-208ENST00000379132 FKBP8Q14318 412 aa16.8■□□□□ 0.28
PAX6-208ENST00000379132 HMGXB3Q12766 1538 aa16.79■□□□□ 0.28
PAX6-208ENST00000379132 NESP48681 1621 aa16.77■□□□□ 0.27
PAX6-208ENST00000379132 KCNH8Q96L42 1107 aa16.74■□□□□ 0.27
PAX6-208ENST00000379132 SOGA1O94964 1423 aa16.73■□□□□ 0.27
PAX6-208ENST00000379132 ABCC8Q09428 1581 aa16.72■□□□□ 0.27
PAX6-208ENST00000379132 MSH5O43196 834 aa16.68■□□□□ 0.26
PAX6-208ENST00000379132 NEFLP07196 543 aa16.66■□□□□ 0.26
PAX6-208ENST00000379132 ITGAEP38570 1179 aa16.65■□□□□ 0.26
PAX6-208ENST00000379132 APLP2Q06481 763 aa16.63■□□□□ 0.25
PAX6-208ENST00000379132 DHX57Q6P158 1386 aaKnown RBP16.63■□□□□ 0.25
PAX6-208ENST00000379132 CADPSQ9ULU8 1353 aa16.62■□□□□ 0.25
PAX6-208ENST00000379132 RUSC2Q8N2Y8 1516 aa16.61■□□□□ 0.25
PAX6-208ENST00000379132 GOLGA3Q08378 1498 aa16.61■□□□□ 0.25
PAX6-208ENST00000379132 EEA1Q15075 1411 aa16.6■□□□□ 0.25
PAX6-208ENST00000379132 ERICH6Q7L0X2 663 aa16.59■□□□□ 0.25
PAX6-208ENST00000379132 RTN4Q9NQC3 1192 aaKnown RBP16.59■□□□□ 0.25
PAX6-208ENST00000379132 CFTRP13569 1480 aa16.56■□□□□ 0.24
PAX6-208ENST00000379132 PHF23Q9BUL5 403 aaPredicted RBP16.56■□□□□ 0.24
PAX6-208ENST00000379132 CLIP1P30622 1438 aa16.52■□□□□ 0.24
PAX6-208ENST00000379132 FANCIQ9NVI1 1328 aa16.52■□□□□ 0.23
PAX6-208ENST00000379132 VPS8Q8N3P4 1428 aa16.5■□□□□ 0.23
PAX6-208ENST00000379132 TRIM52Q96A61 297 aa16.47■□□□□ 0.23
PAX6-208ENST00000379132 DEKP35659 375 aaKnown RBP16.46■□□□□ 0.23
PAX6-208ENST00000379132 DDX10Q13206 875 aaKnown RBP16.46■□□□□ 0.23
PAX6-208ENST00000379132 MYT1LQ9UL68 1186 aa16.46■□□□□ 0.23
PAX6-208ENST00000379132 FANCD2Q9BXW9 1451 aa16.46■□□□□ 0.23
PAX6-208ENST00000379132 RANGAP1P46060 587 aaPredicted RBP16.45■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms