RNA–Protein interactions for RNA: ENST00000378441.6

CDNF-201, Transcript of cerebral dopamine neurotrophic factor, humanhuman

TSL 2

Gene CDNF, Length 891 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDNF-201ENST00000378441 AEBP2Q6ZN18 517 aaPredicted RBP22.73■■□□□ 1.23
CDNF-201ENST00000378441 CHIC1Q5VXU3 224 aa22.07■■□□□ 1.12
CDNF-201ENST00000378441 PHF23Q9BUL5 403 aaPredicted RBP19.44■□□□□ 0.7
CDNF-201ENST00000378441 NISCHQ9Y2I1 1504 aa19.42■□□□□ 0.7
CDNF-201ENST00000378441 SENP3Q9H4L4 574 aaPredicted RBP19.24■□□□□ 0.67
CDNF-201ENST00000378441 FOXD1Q16676 465 aa17.92■□□□□ 0.46
CDNF-201ENST00000378441 PLPPR3Q6T4P5 718 aa17.86■□□□□ 0.45
CDNF-201ENST00000378441 CCDC180Q9P1Z9 1646 aa17.32■□□□□ 0.36
CDNF-201ENST00000378441 ABCC9O60706 1549 aa17.28■□□□□ 0.36
CDNF-201ENST00000378441 PPP6R1Q9UPN7 881 aa17.2■□□□□ 0.34
CDNF-201ENST00000378441 ADRA2BP18089 450 aa17.17■□□□□ 0.34
CDNF-201ENST00000378441 PIAS4Q8N2W9 510 aaPredicted RBP16.86■□□□□ 0.29
CDNF-201ENST00000378441 MSH5O43196 834 aa16.5■□□□□ 0.23
CDNF-201ENST00000378441 RB1CC1Q8TDY2 1594 aa16.47■□□□□ 0.23
CDNF-201ENST00000378441 POTEDQ86YR6 584 aa16.42■□□□□ 0.22
CDNF-201ENST00000378441 NACADO15069 1562 aa16.4■□□□□ 0.22
CDNF-201ENST00000378441 DCAF8L2P0C7V8 631 aa16.32■□□□□ 0.2
CDNF-201ENST00000378441 MYO15BQ96JP2 1530 aa16.26■□□□□ 0.19
CDNF-201ENST00000378441 DNAJC5BQ9UF47 199 aa16.25■□□□□ 0.19
CDNF-201ENST00000378441 PABPN1Q86U42 306 aaKnown RBP eCLIP16.13■□□□□ 0.17
CDNF-201ENST00000378441 ZCCHC6Q5VYS8 1495 aaKnown RBP16.11■□□□□ 0.17
CDNF-201ENST00000378441 DCAF1Q9Y4B6 1507 aa16.06■□□□□ 0.16
CDNF-201ENST00000378441 BICRAQ9NZM4 1560 aa16.04■□□□□ 0.16
CDNF-201ENST00000378441 UNC13AQ9UPW8 1703 aa16.03■□□□□ 0.16
CDNF-201ENST00000378441 SHROOM4Q9ULL8 1493 aa15.83■□□□□ 0.12
CDNF-201ENST00000378441 SCRIBQ14160 1630 aa15.77■□□□□ 0.12
CDNF-201ENST00000378441 PPP4R3CPQ6ZMV5 832 aa15.76■□□□□ 0.11
CDNF-201ENST00000378441 SCAF1Q9H7N4 1312 aaKnown RBP15.64■□□□□ 0.09
CDNF-201ENST00000378441 MAPK8IP2Q13387 824 aaPredicted RBP15.62■□□□□ 0.09
CDNF-201ENST00000378441 EIF4G1Q04637 1599 aaKnown RBP15.61■□□□□ 0.09
CDNF-201ENST00000378441 CC2D2AQ9P2K1 1620 aa15.61■□□□□ 0.09
CDNF-201ENST00000378441 CECR2Q9BXF3 1484 aa15.57■□□□□ 0.08
CDNF-201ENST00000378441 DMRT2Q9Y5R5 561 aa15.36■□□□□ 0.05
CDNF-201ENST00000378441 KCNA4P22459 653 aa15.31■□□□□ 0.04
CDNF-201ENST00000378441 CNKSR2Q8WXI2 1034 aa15.31■□□□□ 0.04
CDNF-201ENST00000378441 NCBP3Q53F19 620 aaKnown RBP15.28■□□□□ 0.04
CDNF-201ENST00000378441 NCAPD3P42695 1498 aa15.2■□□□□ 0.02
CDNF-201ENST00000378441 ATAD2BQ9ULI0 1458 aa15.14■□□□□ 0.01
CDNF-201ENST00000378441 NPM3O75607 178 aaKnown RBP15.1■□□□□ 0.01
CDNF-201ENST00000378441 SMARCA4P51532 1647 aa15.09■□□□□ 0.01
CDNF-201ENST00000378441 SMARCA2P51531 1590 aa15.06■□□□□ 0
CDNF-201ENST00000378441 BAZ1AQ9NRL2 1556 aaPredicted RBP15.04■□□□□ -0
CDNF-201ENST00000378441 HMGXB3Q12766 1538 aa15.04■□□□□ -0
CDNF-201ENST00000378441 RNF216Q9NWF9 866 aaPredicted RBP15.03■□□□□ -0
CDNF-201ENST00000378441 HOXD11P31277 338 aaPredicted RBP15□□□□□ -0.01
CDNF-201ENST00000378441 PEG3Q9GZU2 1588 aa14.99□□□□□ -0.01
CDNF-201ENST00000378441 MROH2BQ7Z745 1585 aa14.97□□□□□ -0.01
CDNF-201ENST00000378441 BAZ1BQ9UIG0 1483 aaKnown RBP14.95□□□□□ -0.02
CDNF-201ENST00000378441 NESP48681 1621 aa14.88□□□□□ -0.03
CDNF-201ENST00000378441 CUX2O14529 1486 aa14.88□□□□□ -0.03
CDNF-201ENST00000378441 ERCC6Q03468 1493 aa14.88□□□□□ -0.03
CDNF-201ENST00000378441 DNAJC5Q9H3Z4 198 aa14.84□□□□□ -0.03
CDNF-201ENST00000378441 LAMC3Q9Y6N6 1575 aa14.77□□□□□ -0.04
CDNF-201ENST00000378441 WIZO95785 1651 aa14.74□□□□□ -0.05
CDNF-201ENST00000378441 CADPSQ9ULU8 1353 aa14.73□□□□□ -0.05
CDNF-201ENST00000378441 DCAF8L1A6NGE4 600 aa14.73□□□□□ -0.05
CDNF-201ENST00000378441 RSF1Q96T23 1441 aaPredicted RBP14.71□□□□□ -0.05
CDNF-201ENST00000378441 PDS5BQ9NTI5 1447 aa14.71□□□□□ -0.05
CDNF-201ENST00000378441 THOC2Q8NI27 1593 aaKnown RBP14.69□□□□□ -0.06
CDNF-201ENST00000378441 KIF21AQ7Z4S6 1674 aa14.61□□□□□ -0.07
CDNF-201ENST00000378441 CFTRP13569 1480 aa14.58□□□□□ -0.08
CDNF-201ENST00000378441 TOP2AP11388 1531 aaKnown RBP14.57□□□□□ -0.08
CDNF-201ENST00000378441 MRC2Q9UBG0 1479 aa14.56□□□□□ -0.08
CDNF-201ENST00000378441 SLC4A1APQ9BWU0 796 aaKnown RBP14.54□□□□□ -0.08
CDNF-201ENST00000378441 WDR62O43379 1518 aa14.53□□□□□ -0.08
CDNF-201ENST00000378441 FANCD2Q9BXW9 1451 aa14.52□□□□□ -0.08
CDNF-201ENST00000378441 CEP164Q9UPV0 1460 aa14.5□□□□□ -0.09
CDNF-201ENST00000378441 CCDC88BA6NC98 1476 aa14.44□□□□□ -0.1
CDNF-201ENST00000378441 URB2Q14146 1524 aaKnown RBP14.41□□□□□ -0.1
CDNF-201ENST00000378441 GRWD1Q9BQ67 446 aaKnown RBP eCLIP14.3□□□□□ -0.12
CDNF-201ENST00000378441 SLC4A2P04920 1241 aa14.29□□□□□ -0.12
CDNF-201ENST00000378441 PRDM2Q13029 1718 aa14.27□□□□□ -0.12
CDNF-201ENST00000378441 TOPBP1Q92547 1522 aa14.26□□□□□ -0.13
CDNF-201ENST00000378441 OSCARQ8IYS5 282 aa14.24□□□□□ -0.13
CDNF-201ENST00000378441 IFT140Q96RY7 1462 aa14.24□□□□□ -0.13
CDNF-201ENST00000378441 ABCC8Q09428 1581 aa14.23□□□□□ -0.13
CDNF-201ENST00000378441 ZNF608Q9ULD9 1512 aaPredicted RBP14.22□□□□□ -0.13
CDNF-201ENST00000378441 DNMBPQ6XZF7 1577 aa14.18□□□□□ -0.14
CDNF-201ENST00000378441 RNF39Q9H2S5 420 aa14.16□□□□□ -0.14
CDNF-201ENST00000378441 TRIM41Q8WV44 630 aa14.13□□□□□ -0.15
CDNF-201ENST00000378441 POLA1P09884 1462 aaPredicted RBP14.12□□□□□ -0.15
CDNF-201ENST00000378441 TARBP1Q13395 1621 aaKnown RBP14.12□□□□□ -0.15
CDNF-201ENST00000378441 AQRO60306 1485 aaKnown RBP eCLIP14.11□□□□□ -0.15
CDNF-201ENST00000378441 ZBTB22O15209 634 aa14.1□□□□□ -0.15
CDNF-201ENST00000378441 EIF4G3O43432 1585 aaKnown RBP14.09□□□□□ -0.15
CDNF-201ENST00000378441 U3KPZ7 1027 aaPredicted RBP14.08□□□□□ -0.16
CDNF-201ENST00000378441 RAD54L2Q9Y4B4 1467 aa14.07□□□□□ -0.16
CDNF-201ENST00000378441 FOXD4L1Q9NU39 408 aa14.07□□□□□ -0.16
CDNF-201ENST00000378441 SOGA1O94964 1423 aa14.07□□□□□ -0.16
CDNF-201ENST00000378441 SUPT5HO00267 1087 aaKnown RBP14.06□□□□□ -0.16
CDNF-201ENST00000378441 EHMT2Q96KQ7 1210 aa14.05□□□□□ -0.16
CDNF-201ENST00000378441 CUX1P39880 1505 aa14.05□□□□□ -0.16
CDNF-201ENST00000378441 TDRD9Q8NDG6 1382 aaKnown RBP14.04□□□□□ -0.16
CDNF-201ENST00000378441 FGD5Q6ZNL6 1462 aa14.03□□□□□ -0.16
CDNF-201ENST00000378441 RIMBP3CA6NJZ7 1639 aa13.97□□□□□ -0.17
CDNF-201ENST00000378441 RIMBP3BA6NNM3 1639 aa13.97□□□□□ -0.17
CDNF-201ENST00000378441 RIMBP3Q9UFD9 1639 aa13.97□□□□□ -0.17
CDNF-201ENST00000378441 ARHGEF11O15085 1522 aa13.97□□□□□ -0.17
CDNF-201ENST00000378441 C1QBPQ07021 282 aaKnown RBP13.96□□□□□ -0.17
CDNF-201ENST00000378441 WDR97A6NE52 1622 aa13.96□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 56.9 ms