RNA–Protein interactions for RNA: ENST00000378183.8

TRIM13-203, Transcript of tripartite motif containing 13, humanhuman

TSL 2

Gene TRIM13, Length 1,251 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM13-203ENST00000378183 NISCHQ9Y2I1 1504 aa49.88■■■■■ 5.58
TRIM13-203ENST00000378183 CCDC180Q9P1Z9 1646 aa44.3■■■■■ 4.68
TRIM13-203ENST00000378183 ABCC9O60706 1549 aa43.26■■■■■ 4.52
TRIM13-203ENST00000378183 RB1CC1Q8TDY2 1594 aa41.63■■■■■ 4.26
TRIM13-203ENST00000378183 NACADO15069 1562 aa41.61■■■■■ 4.25
TRIM13-203ENST00000378183 DCAF8L2P0C7V8 631 aa41.58■■■■■ 4.25
TRIM13-203ENST00000378183 ZCCHC6Q5VYS8 1495 aaKnown RBP41.56■■■■■ 4.24
TRIM13-203ENST00000378183 MYO15BQ96JP2 1530 aa41.38■■■■■ 4.21
TRIM13-203ENST00000378183 DCAF1Q9Y4B6 1507 aa41.25■■■■■ 4.19
TRIM13-203ENST00000378183 UNC13AQ9UPW8 1703 aa40.82■■■■■ 4.13
TRIM13-203ENST00000378183 BICRAQ9NZM4 1560 aa40.45■■■■■ 4.07
TRIM13-203ENST00000378183 PABPN1Q86U42 306 aaKnown RBP eCLIP40.45■■■■■ 4.07
TRIM13-203ENST00000378183 SCRIBQ14160 1630 aa40.44■■■■■ 4.06
TRIM13-203ENST00000378183 SHROOM4Q9ULL8 1493 aa39.91■■■■□ 3.98
TRIM13-203ENST00000378183 DNAJC5BQ9UF47 199 aa39.69■■■■□ 3.94
TRIM13-203ENST00000378183 EIF4G1Q04637 1599 aaKnown RBP39.33■■■■□ 3.89
TRIM13-203ENST00000378183 CC2D2AQ9P2K1 1620 aa39.16■■■■□ 3.86
TRIM13-203ENST00000378183 CECR2Q9BXF3 1484 aa38.88■■■■□ 3.81
TRIM13-203ENST00000378183 SMARCA4P51532 1647 aa38.7■■■■□ 3.79
TRIM13-203ENST00000378183 BAZ1AQ9NRL2 1556 aaPredicted RBP38.62■■■■□ 3.77
TRIM13-203ENST00000378183 MROH2BQ7Z745 1585 aa38.47■■■■□ 3.75
TRIM13-203ENST00000378183 ATAD2BQ9ULI0 1458 aa38.45■■■■□ 3.75
TRIM13-203ENST00000378183 NCAPD3P42695 1498 aa38.41■■■■□ 3.74
TRIM13-203ENST00000378183 SMARCA2P51531 1590 aa38.37■■■■□ 3.73
TRIM13-203ENST00000378183 PEG3Q9GZU2 1588 aa38.31■■■■□ 3.72
TRIM13-203ENST00000378183 HMGXB3Q12766 1538 aa38.21■■■■□ 3.71
TRIM13-203ENST00000378183 BAZ1BQ9UIG0 1483 aaKnown RBP38.1■■■■□ 3.69
TRIM13-203ENST00000378183 WIZO95785 1651 aa38.08■■■■□ 3.69
TRIM13-203ENST00000378183 RSF1Q96T23 1441 aaPredicted RBP38.04■■■■□ 3.68
TRIM13-203ENST00000378183 TOP2AP11388 1531 aaKnown RBP37.62■■■■□ 3.61
TRIM13-203ENST00000378183 NESP48681 1621 aa37.5■■■■□ 3.59
TRIM13-203ENST00000378183 LAMC3Q9Y6N6 1575 aa37.37■■■■□ 3.57
TRIM13-203ENST00000378183 CADPSQ9ULU8 1353 aa37.27■■■■□ 3.56
TRIM13-203ENST00000378183 ERCC6Q03468 1493 aa37.22■■■■□ 3.55
TRIM13-203ENST00000378183 CCDC88BA6NC98 1476 aa37.2■■■■□ 3.55
TRIM13-203ENST00000378183 SUPT5HO00267 1087 aaKnown RBP37.11■■■■□ 3.53
TRIM13-203ENST00000378183 CFTRP13569 1480 aa37.08■■■■□ 3.53
TRIM13-203ENST00000378183 KIF21AQ7Z4S6 1674 aa37.08■■■■□ 3.53
TRIM13-203ENST00000378183 PDS5BQ9NTI5 1447 aa37.07■■■■□ 3.52
TRIM13-203ENST00000378183 THOC2Q8NI27 1593 aaKnown RBP36.91■■■■□ 3.5
TRIM13-203ENST00000378183 PRDM2Q13029 1718 aa36.87■■■■□ 3.49
TRIM13-203ENST00000378183 FANCD2Q9BXW9 1451 aa36.85■■■■□ 3.49
TRIM13-203ENST00000378183 CUX2O14529 1486 aa36.82■■■■□ 3.48
TRIM13-203ENST00000378183 CEP164Q9UPV0 1460 aa36.78■■■■□ 3.48
TRIM13-203ENST00000378183 MRC2Q9UBG0 1479 aa36.72■■■■□ 3.47
TRIM13-203ENST00000378183 WDR62O43379 1518 aa36.62■■■■□ 3.45
TRIM13-203ENST00000378183 URB2Q14146 1524 aaKnown RBP36.52■■■■□ 3.44
TRIM13-203ENST00000378183 TOPBP1Q92547 1522 aa36.29■■■■□ 3.4
TRIM13-203ENST00000378183 DNMBPQ6XZF7 1577 aa36.25■■■■□ 3.39
TRIM13-203ENST00000378183 ABCC8Q09428 1581 aa36.24■■■■□ 3.39
TRIM13-203ENST00000378183 CUX1P39880 1505 aa36.08■■■■□ 3.37
TRIM13-203ENST00000378183 IFT140Q96RY7 1462 aa36.01■■■■□ 3.36
TRIM13-203ENST00000378183 POLA1P09884 1462 aaPredicted RBP35.99■■■■□ 3.35
TRIM13-203ENST00000378183 TARBP1Q13395 1621 aaKnown RBP35.93■■■■□ 3.34
TRIM13-203ENST00000378183 FGD5Q6ZNL6 1462 aa35.92■■■■□ 3.34
TRIM13-203ENST00000378183 ZNF608Q9ULD9 1512 aaPredicted RBP35.89■■■■□ 3.34
TRIM13-203ENST00000378183 RAD54L2Q9Y4B4 1467 aa35.86■■■■□ 3.33
TRIM13-203ENST00000378183 SOGA1O94964 1423 aa35.83■■■■□ 3.33
TRIM13-203ENST00000378183 WRNQ14191 1432 aaPredicted RBP eCLIP35.83■■■■□ 3.33
TRIM13-203ENST00000378183 SYNJ1O43426 1573 aa35.8■■■■□ 3.32
TRIM13-203ENST00000378183 BIVM-ERCC5R4GMW8 1640 aa35.79■■■■□ 3.32
TRIM13-203ENST00000378183 TOP2BQ02880 1626 aa35.77■■■■□ 3.32
TRIM13-203ENST00000378183 EIF4G3O43432 1585 aaKnown RBP35.74■■■■□ 3.31
TRIM13-203ENST00000378183 AQRO60306 1485 aaKnown RBP eCLIP35.69■■■■□ 3.36e-15■■■■■ 98.7
TRIM13-203ENST00000378183 WDR97A6NE52 1622 aa35.67■■■■□ 3.3
TRIM13-203ENST00000378183 TDRD9Q8NDG6 1382 aaKnown RBP35.63■■■■□ 3.29
TRIM13-203ENST00000378183 DNAJC5Q9H3Z4 198 aa35.6■■■■□ 3.29
TRIM13-203ENST00000378183 ABCA10Q8WWZ4 1543 aa35.56■■■■□ 3.28
TRIM13-203ENST00000378183 ABCA5Q8WWZ7 1642 aa35.45■■■■□ 3.27
TRIM13-203ENST00000378183 GAPVD1Q14C86 1478 aa35.41■■■■□ 3.26
TRIM13-203ENST00000378183 PBRM1Q86U86 1689 aa35.39■■■■□ 3.26
TRIM13-203ENST00000378183 GRIN2BQ13224 1484 aa35.38■■■■□ 3.25
TRIM13-203ENST00000378183 SNAPC4Q5SXM2 1469 aa35.35■■■■□ 3.25
TRIM13-203ENST00000378183 CHD1O14646 1710 aa35.32■■■■□ 3.24
TRIM13-203ENST00000378183 OSCARQ8IYS5 282 aa35.3■■■■□ 3.24
TRIM13-203ENST00000378183 MAGI1Q96QZ7 1491 aaPredicted RBP35.28■■■■□ 3.24
TRIM13-203ENST00000378183 FBLN2P98095 1184 aa35.18■■■■□ 3.22
TRIM13-203ENST00000378183 SYNJ2O15056 1496 aa35.15■■■■□ 3.22
TRIM13-203ENST00000378183 ERICH3Q5RHP9 1530 aa35.13■■■■□ 3.21
TRIM13-203ENST00000378183 CHMP7Q8WUX9 453 aaPredicted RBP35.1■■■■□ 3.21
TRIM13-203ENST00000378183 ADAMTS12P58397 1594 aa35.08■■■■□ 3.21
TRIM13-203ENST00000378183 KIF27Q86VH2 1401 aa35.05■■■■□ 3.2
TRIM13-203ENST00000378183 TRIM41Q8WV44 630 aa35.02■■■■□ 3.2
TRIM13-203ENST00000378183 FHAD1B1AJZ9 1412 aa34.99■■■■□ 3.19
TRIM13-203ENST00000378183 IGF1RP08069 1367 aa34.95■■■■□ 3.19
TRIM13-203ENST00000378183 GRIN2AQ12879 1464 aa34.95■■■■□ 3.19
TRIM13-203ENST00000378183 CLASP1Q7Z460 1538 aa34.91■■■■□ 3.18
TRIM13-203ENST00000378183 RUSC2Q8N2Y8 1516 aa34.87■■■■□ 3.17
TRIM13-203ENST00000378183 CUL7Q14999 1698 aa34.83■■■■□ 3.17
TRIM13-203ENST00000378183 CEP170Q5SW79 1584 aa34.81■■■■□ 3.16
TRIM13-203ENST00000378183 NUP160Q12769 1436 aa34.8■■■■□ 3.16
TRIM13-203ENST00000378183 RIMBP3CA6NJZ7 1639 aa34.79■■■■□ 3.16
TRIM13-203ENST00000378183 RIMBP3BA6NNM3 1639 aa34.79■■■■□ 3.16
TRIM13-203ENST00000378183 RIMBP3Q9UFD9 1639 aa34.79■■■■□ 3.16
TRIM13-203ENST00000378183 ARHGEF11O15085 1522 aa34.76■■■■□ 3.16
TRIM13-203ENST00000378183 CARMIL1Q5VZK9 1371 aa34.72■■■■□ 3.15
TRIM13-203ENST00000378183 CHIC1Q5VXU3 224 aa34.71■■■■□ 3.15
TRIM13-203ENST00000378183 SHROOM2Q13796 1616 aa34.55■■■■□ 3.12
TRIM13-203ENST00000378183 RAPGEF2Q9Y4G8 1499 aa34.52■■■■□ 3.12
TRIM13-203ENST00000378183 ARAP1Q96P48 1450 aa34.51■■■■□ 3.11
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms