RNA–Protein interactions for RNA: ENST00000377803.3

HIST1H4C-201, Transcript of histone cluster 1 H4 family member c, humanhuman

APPRIS P1 BASIC

Gene HIST1H4C, Length 435 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIST1H4C-201ENST00000377803 NISCHQ9Y2I1 1504 aa29.16■■■□□ 2.26
HIST1H4C-201ENST00000377803 CCDC180Q9P1Z9 1646 aa26.11■■□□□ 1.77
HIST1H4C-201ENST00000377803 ABCC9O60706 1549 aa25.59■■□□□ 1.69
HIST1H4C-201ENST00000377803 RB1CC1Q8TDY2 1594 aa24.64■■□□□ 1.54
HIST1H4C-201ENST00000377803 NACADO15069 1562 aa24.56■■□□□ 1.52
HIST1H4C-201ENST00000377803 DCAF8L2P0C7V8 631 aa24.4■■□□□ 1.5
HIST1H4C-201ENST00000377803 MYO15BQ96JP2 1530 aa24.35■■□□□ 1.49
HIST1H4C-201ENST00000377803 ZCCHC6Q5VYS8 1495 aaKnown RBP24.28■■□□□ 1.48
HIST1H4C-201ENST00000377803 DCAF1Q9Y4B6 1507 aa24.17■■□□□ 1.46
HIST1H4C-201ENST00000377803 UNC13AQ9UPW8 1703 aa24.01■■□□□ 1.43
HIST1H4C-201ENST00000377803 PABPN1Q86U42 306 aaKnown RBP eCLIP23.81■■□□□ 1.4
HIST1H4C-201ENST00000377803 BICRAQ9NZM4 1560 aa23.78■■□□□ 1.4
HIST1H4C-201ENST00000377803 SCRIBQ14160 1630 aa23.74■■□□□ 1.39
HIST1H4C-201ENST00000377803 SHROOM4Q9ULL8 1493 aa23.69■■□□□ 1.38
HIST1H4C-201ENST00000377803 DNAJC5BQ9UF47 199 aa23.46■■□□□ 1.35
HIST1H4C-201ENST00000377803 EIF4G1Q04637 1599 aaKnown RBP23.23■■□□□ 1.31
HIST1H4C-201ENST00000377803 CC2D2AQ9P2K1 1620 aa23.17■■□□□ 1.3
HIST1H4C-201ENST00000377803 CECR2Q9BXF3 1484 aa23.04■■□□□ 1.28
HIST1H4C-201ENST00000377803 SMARCA4P51532 1647 aa22.7■■□□□ 1.22
HIST1H4C-201ENST00000377803 BAZ1AQ9NRL2 1556 aaPredicted RBP22.69■■□□□ 1.22
HIST1H4C-201ENST00000377803 SMARCA2P51531 1590 aa22.63■■□□□ 1.21
HIST1H4C-201ENST00000377803 NCAPD3P42695 1498 aa22.6■■□□□ 1.21
HIST1H4C-201ENST00000377803 ATAD2BQ9ULI0 1458 aa22.58■■□□□ 1.2
HIST1H4C-201ENST00000377803 HMGXB3Q12766 1538 aa22.54■■□□□ 1.2
HIST1H4C-201ENST00000377803 PEG3Q9GZU2 1588 aa22.48■■□□□ 1.19
HIST1H4C-201ENST00000377803 BAZ1BQ9UIG0 1483 aaKnown RBP22.45■■□□□ 1.18
HIST1H4C-201ENST00000377803 MROH2BQ7Z745 1585 aa22.43■■□□□ 1.18
HIST1H4C-201ENST00000377803 WIZO95785 1651 aa22.2■■□□□ 1.15
HIST1H4C-201ENST00000377803 ERCC6Q03468 1493 aa22.17■■□□□ 1.14
HIST1H4C-201ENST00000377803 RSF1Q96T23 1441 aaPredicted RBP22.11■■□□□ 1.13
HIST1H4C-201ENST00000377803 LAMC3Q9Y6N6 1575 aa22.11■■□□□ 1.13
HIST1H4C-201ENST00000377803 NESP48681 1621 aa22.05■■□□□ 1.12
HIST1H4C-201ENST00000377803 TOP2AP11388 1531 aaKnown RBP22.02■■□□□ 1.12
HIST1H4C-201ENST00000377803 CUX2O14529 1486 aa21.99■■□□□ 1.11
HIST1H4C-201ENST00000377803 PDS5BQ9NTI5 1447 aa21.95■■□□□ 1.1
HIST1H4C-201ENST00000377803 CADPSQ9ULU8 1353 aa21.93■■□□□ 1.1
HIST1H4C-201ENST00000377803 KIF21AQ7Z4S6 1674 aa21.86■■□□□ 1.09
HIST1H4C-201ENST00000377803 THOC2Q8NI27 1593 aaKnown RBP21.84■■□□□ 1.09
HIST1H4C-201ENST00000377803 CFTRP13569 1480 aa21.77■■□□□ 1.07
HIST1H4C-201ENST00000377803 CEP164Q9UPV0 1460 aa21.74■■□□□ 1.07
HIST1H4C-201ENST00000377803 MRC2Q9UBG0 1479 aa21.72■■□□□ 1.07
HIST1H4C-201ENST00000377803 FANCD2Q9BXW9 1451 aa21.71■■□□□ 1.07
HIST1H4C-201ENST00000377803 PRDM2Q13029 1718 aa21.7■■□□□ 1.06
HIST1H4C-201ENST00000377803 CCDC88BA6NC98 1476 aa21.68■■□□□ 1.06
HIST1H4C-201ENST00000377803 WDR62O43379 1518 aa21.65■■□□□ 1.06
HIST1H4C-201ENST00000377803 URB2Q14146 1524 aaKnown RBP21.45■■□□□ 1.02
HIST1H4C-201ENST00000377803 SUPT5HO00267 1087 aaKnown RBP21.42■■□□□ 1.02
HIST1H4C-201ENST00000377803 ABCC8Q09428 1581 aa21.4■■□□□ 1.02
HIST1H4C-201ENST00000377803 DNAJC5Q9H3Z4 198 aa21.37■■□□□ 1.01
HIST1H4C-201ENST00000377803 DNMBPQ6XZF7 1577 aa21.33■■□□□ 1.01
HIST1H4C-201ENST00000377803 TOPBP1Q92547 1522 aa21.33■■□□□ 1
HIST1H4C-201ENST00000377803 IFT140Q96RY7 1462 aa21.28■■□□□ 1
HIST1H4C-201ENST00000377803 POLA1P09884 1462 aaPredicted RBP21.13■□□□□ 0.97
HIST1H4C-201ENST00000377803 EIF4G3O43432 1585 aaKnown RBP21.1■□□□□ 0.97
HIST1H4C-201ENST00000377803 ZNF608Q9ULD9 1512 aaPredicted RBP21.1■□□□□ 0.97
HIST1H4C-201ENST00000377803 TARBP1Q13395 1621 aaKnown RBP21.1■□□□□ 0.97
HIST1H4C-201ENST00000377803 CUX1P39880 1505 aa21.08■□□□□ 0.96
HIST1H4C-201ENST00000377803 FGD5Q6ZNL6 1462 aa21.07■□□□□ 0.96
HIST1H4C-201ENST00000377803 WDR97A6NE52 1622 aa21.05■□□□□ 0.96
HIST1H4C-201ENST00000377803 SOGA1O94964 1423 aa21.04■□□□□ 0.96
HIST1H4C-201ENST00000377803 RAD54L2Q9Y4B4 1467 aa20.99■□□□□ 0.95
HIST1H4C-201ENST00000377803 OSCARQ8IYS5 282 aa20.97■□□□□ 0.95
HIST1H4C-201ENST00000377803 AQRO60306 1485 aaKnown RBP eCLIP20.95■□□□□ 0.94
HIST1H4C-201ENST00000377803 WRNQ14191 1432 aaPredicted RBP eCLIP20.92■□□□□ 0.945e-6■□□□□ 9.8
HIST1H4C-201ENST00000377803 BIVM-ERCC5R4GMW8 1640 aa20.92■□□□□ 0.94
HIST1H4C-201ENST00000377803 TOP2BQ02880 1626 aa20.9■□□□□ 0.94
HIST1H4C-201ENST00000377803 TDRD9Q8NDG6 1382 aaKnown RBP20.89■□□□□ 0.93
HIST1H4C-201ENST00000377803 ABCA10Q8WWZ4 1543 aa20.86■□□□□ 0.93
HIST1H4C-201ENST00000377803 CHD1O14646 1710 aa20.86■□□□□ 0.93
HIST1H4C-201ENST00000377803 GRIN2BQ13224 1484 aa20.86■□□□□ 0.93
HIST1H4C-201ENST00000377803 SYNJ1O43426 1573 aa20.85■□□□□ 0.93
HIST1H4C-201ENST00000377803 MAGI1Q96QZ7 1491 aaPredicted RBP20.84■□□□□ 0.93
HIST1H4C-201ENST00000377803 SNAPC4Q5SXM2 1469 aa20.83■□□□□ 0.93
HIST1H4C-201ENST00000377803 PBRM1Q86U86 1689 aa20.83■□□□□ 0.92
HIST1H4C-201ENST00000377803 GAPVD1Q14C86 1478 aa20.81■□□□□ 0.92
HIST1H4C-201ENST00000377803 ABCA5Q8WWZ7 1642 aa20.81■□□□□ 0.92
HIST1H4C-201ENST00000377803 FBLN2P98095 1184 aa20.79■□□□□ 0.92
HIST1H4C-201ENST00000377803 SYNJ2O15056 1496 aa20.74■□□□□ 0.91
HIST1H4C-201ENST00000377803 CHMP7Q8WUX9 453 aaPredicted RBP20.72■□□□□ 0.91
HIST1H4C-201ENST00000377803 RIMBP3CA6NJZ7 1639 aa20.67■□□□□ 0.9
HIST1H4C-201ENST00000377803 RIMBP3BA6NNM3 1639 aa20.67■□□□□ 0.9
HIST1H4C-201ENST00000377803 RIMBP3Q9UFD9 1639 aa20.67■□□□□ 0.9
HIST1H4C-201ENST00000377803 ARHGEF11O15085 1522 aa20.66■□□□□ 0.9
HIST1H4C-201ENST00000377803 ADAMTS12P58397 1594 aa20.64■□□□□ 0.9
HIST1H4C-201ENST00000377803 ERICH3Q5RHP9 1530 aa20.64■□□□□ 0.9
HIST1H4C-201ENST00000377803 TRIM41Q8WV44 630 aa20.64■□□□□ 0.89
HIST1H4C-201ENST00000377803 CLASP1Q7Z460 1538 aa20.61■□□□□ 0.89
HIST1H4C-201ENST00000377803 FHAD1B1AJZ9 1412 aa20.58■□□□□ 0.88
HIST1H4C-201ENST00000377803 GRIN2AQ12879 1464 aa20.57■□□□□ 0.88
HIST1H4C-201ENST00000377803 KIF27Q86VH2 1401 aa20.53■□□□□ 0.88
HIST1H4C-201ENST00000377803 NUP160Q12769 1436 aa20.47■□□□□ 0.87
HIST1H4C-201ENST00000377803 CUL7Q14999 1698 aa20.47■□□□□ 0.87
HIST1H4C-201ENST00000377803 ARAP1Q96P48 1450 aa20.45■□□□□ 0.86
HIST1H4C-201ENST00000377803 CEP170Q5SW79 1584 aa20.45■□□□□ 0.86
HIST1H4C-201ENST00000377803 CYB5RLQ6IPT4 315 aa20.41■□□□□ 0.86
HIST1H4C-201ENST00000377803 SHROOM2Q13796 1616 aa20.35■□□□□ 0.85
HIST1H4C-201ENST00000377803 IGF1RP08069 1367 aa20.34■□□□□ 0.85
HIST1H4C-201ENST00000377803 RUSC2Q8N2Y8 1516 aa20.34■□□□□ 0.85
HIST1H4C-201ENST00000377803 CARMIL1Q5VZK9 1371 aa20.28■□□□□ 0.84
HIST1H4C-201ENST00000377803 KIAA0586Q9BVV6 1533 aa20.25■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms