RNA–Protein interactions for RNA: ENST00000377615.7

COMMD6-203, Transcript of COMM domain containing 6, humanhuman

APPRIS P1 TSL 5 BASIC

Gene COMMD6, Length 1,793 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD6-203ENST00000377615 NISCHQ9Y2I1 1504 aa37.83■■■■□ 3.65
COMMD6-203ENST00000377615 CCDC180Q9P1Z9 1646 aa33.04■■■□□ 2.88
COMMD6-203ENST00000377615 ZCCHC6Q5VYS8 1495 aaKnown RBP31.75■■■□□ 2.67
COMMD6-203ENST00000377615 ABCC9O60706 1549 aa31.52■■■□□ 2.64
COMMD6-203ENST00000377615 DCAF8L2P0C7V8 631 aa31.42■■■□□ 2.62
COMMD6-203ENST00000377615 DCAF1Q9Y4B6 1507 aa31.23■■■□□ 2.59
COMMD6-203ENST00000377615 MYO15BQ96JP2 1530 aa30.91■■■□□ 2.54
COMMD6-203ENST00000377615 SHROOM4Q9ULL8 1493 aa30.85■■■□□ 2.53
COMMD6-203ENST00000377615 NACADO15069 1562 aa30.83■■■□□ 2.53
COMMD6-203ENST00000377615 RB1CC1Q8TDY2 1594 aa30.63■■■□□ 2.49
COMMD6-203ENST00000377615 SCRIBQ14160 1630 aa30.45■■■□□ 2.47
COMMD6-203ENST00000377615 UNC13AQ9UPW8 1703 aa29.97■■■□□ 2.39
COMMD6-203ENST00000377615 BICRAQ9NZM4 1560 aa29.71■■■□□ 2.35
COMMD6-203ENST00000377615 PABPN1Q86U42 306 aaKnown RBP eCLIP29.71■■■□□ 2.35
COMMD6-203ENST00000377615 SUPT5HO00267 1087 aaKnown RBP29.57■■■□□ 2.32
COMMD6-203ENST00000377615 CECR2Q9BXF3 1484 aa29.46■■■□□ 2.31
COMMD6-203ENST00000377615 RSF1Q96T23 1441 aaPredicted RBP29.29■■■□□ 2.28
COMMD6-203ENST00000377615 MROH2BQ7Z745 1585 aa29.25■■■□□ 2.27
COMMD6-203ENST00000377615 BAZ1AQ9NRL2 1556 aaPredicted RBP29.23■■■□□ 2.27
COMMD6-203ENST00000377615 SMARCA4P51532 1647 aa29.13■■■□□ 2.25
COMMD6-203ENST00000377615 WIZO95785 1651 aa29■■■□□ 2.23
COMMD6-203ENST00000377615 EIF4G1Q04637 1599 aaKnown RBP28.85■■■□□ 2.21
COMMD6-203ENST00000377615 PEG3Q9GZU2 1588 aa28.73■■■□□ 2.19
COMMD6-203ENST00000377615 ATAD2BQ9ULI0 1458 aa28.7■■■□□ 2.19
COMMD6-203ENST00000377615 TOP2AP11388 1531 aaKnown RBP28.68■■■□□ 2.18
COMMD6-203ENST00000377615 SMARCA2P51531 1590 aa28.67■■■□□ 2.18
COMMD6-203ENST00000377615 BAZ1BQ9UIG0 1483 aaKnown RBP28.56■■■□□ 2.16
COMMD6-203ENST00000377615 CC2D2AQ9P2K1 1620 aa28.47■■■□□ 2.15
COMMD6-203ENST00000377615 NCAPD3P42695 1498 aa28.46■■■□□ 2.15
COMMD6-203ENST00000377615 HMGXB3Q12766 1538 aa28.41■■■□□ 2.14
COMMD6-203ENST00000377615 CCDC88BA6NC98 1476 aa28.39■■■□□ 2.14
COMMD6-203ENST00000377615 CHIC1Q5VXU3 224 aa28.15■■■□□ 2.1
COMMD6-203ENST00000377615 DNAJC5BQ9UF47 199 aa27.96■■■□□ 2.07
COMMD6-203ENST00000377615 CFTRP13569 1480 aa27.79■■■□□ 2.04
COMMD6-203ENST00000377615 TRIM41Q8WV44 630 aa27.78■■■□□ 2.04
COMMD6-203ENST00000377615 ABCC8Q09428 1581 aa27.77■■■□□ 2.04
COMMD6-203ENST00000377615 CADPSQ9ULU8 1353 aa27.74■■■□□ 2.03
COMMD6-203ENST00000377615 NESP48681 1621 aa27.61■■■□□ 2.01
COMMD6-203ENST00000377615 WRNQ14191 1432 aaPredicted RBP eCLIP27.59■■■□□ 2.01
COMMD6-203ENST00000377615 PRDM2Q13029 1718 aa27.58■■■□□ 2.01
COMMD6-203ENST00000377615 LAMC3Q9Y6N6 1575 aa27.52■■■□□ 2
COMMD6-203ENST00000377615 SYNJ1O43426 1573 aa27.49■■□□□ 1.99
COMMD6-203ENST00000377615 FANCD2Q9BXW9 1451 aa27.46■■□□□ 1.99
COMMD6-203ENST00000377615 CUX1P39880 1505 aa27.36■■□□□ 1.97
COMMD6-203ENST00000377615 TOP2BQ02880 1626 aa27.36■■□□□ 1.97
COMMD6-203ENST00000377615 PDS5BQ9NTI5 1447 aa27.34■■□□□ 1.97
COMMD6-203ENST00000377615 FAM9AQ8IZU1 332 aaPredicted RBP27.33■■□□□ 1.97
COMMD6-203ENST00000377615 BIVM-ERCC5R4GMW8 1640 aa27.32■■□□□ 1.96
COMMD6-203ENST00000377615 CEP164Q9UPV0 1460 aa27.31■■□□□ 1.96
COMMD6-203ENST00000377615 KIF21AQ7Z4S6 1674 aa27.23■■□□□ 1.95
COMMD6-203ENST00000377615 SOGA1O94964 1423 aa27.21■■□□□ 1.95
COMMD6-203ENST00000377615 DNMBPQ6XZF7 1577 aa27.16■■□□□ 1.94
COMMD6-203ENST00000377615 URB2Q14146 1524 aaKnown RBP27.13■■□□□ 1.93
COMMD6-203ENST00000377615 TOPBP1Q92547 1522 aa27.13■■□□□ 1.93
COMMD6-203ENST00000377615 RUSC2Q8N2Y8 1516 aa27.12■■□□□ 1.93
COMMD6-203ENST00000377615 FGD5Q6ZNL6 1462 aa27.1■■□□□ 1.93
COMMD6-203ENST00000377615 LOC105371045A0A1W2PR82 267 aa27.1■■□□□ 1.93
COMMD6-203ENST00000377615 ERCC6Q03468 1493 aa27.05■■□□□ 1.92
COMMD6-203ENST00000377615 EEA1Q15075 1411 aa27.05■■□□□ 1.92
COMMD6-203ENST00000377615 MRC2Q9UBG0 1479 aa27.02■■□□□ 1.92
COMMD6-203ENST00000377615 EHMT2Q96KQ7 1210 aa27.01■■□□□ 1.91
COMMD6-203ENST00000377615 POLA1P09884 1462 aaPredicted RBP26.99■■□□□ 1.91
COMMD6-203ENST00000377615 CSRNP3Q8WYN3 585 aa26.97■■□□□ 1.91
COMMD6-203ENST00000377615 RAD54L2Q9Y4B4 1467 aa26.93■■□□□ 1.9
COMMD6-203ENST00000377615 CUX2O14529 1486 aa26.9■■□□□ 1.9
COMMD6-203ENST00000377615 KIF27Q86VH2 1401 aa26.9■■□□□ 1.9
COMMD6-203ENST00000377615 WDR62O43379 1518 aa26.86■■□□□ 1.89
COMMD6-203ENST00000377615 THOC2Q8NI27 1593 aaKnown RBP26.83■■□□□ 1.89
COMMD6-203ENST00000377615 ABCA10Q8WWZ4 1543 aa26.82■■□□□ 1.88
COMMD6-203ENST00000377615 WDR97A6NE52 1622 aa26.74■■□□□ 1.87
COMMD6-203ENST00000377615 KIF21BO75037 1637 aa26.72■■□□□ 1.87
COMMD6-203ENST00000377615 TARBP1Q13395 1621 aaKnown RBP26.72■■□□□ 1.87
COMMD6-203ENST00000377615 GOLGA3Q08378 1498 aa26.72■■□□□ 1.87
COMMD6-203ENST00000377615 TDRD9Q8NDG6 1382 aaKnown RBP26.69■■□□□ 1.86
COMMD6-203ENST00000377615 IGF1RP08069 1367 aa26.68■■□□□ 1.86
COMMD6-203ENST00000377615 PRXQ9BXM0 1461 aa26.66■■□□□ 1.86
COMMD6-203ENST00000377615 RAPGEF2Q9Y4G8 1499 aa26.66■■□□□ 1.86
COMMD6-203ENST00000377615 IFT140Q96RY7 1462 aa26.65■■□□□ 1.86
COMMD6-203ENST00000377615 UBTFP17480 764 aaKnown RBP26.65■■□□□ 1.86
COMMD6-203ENST00000377615 ABCA5Q8WWZ7 1642 aa26.62■■□□□ 1.85
COMMD6-203ENST00000377615 GAPVD1Q14C86 1478 aa26.6■■□□□ 1.85
COMMD6-203ENST00000377615 TNIKQ9UKE5 1360 aa26.58■■□□□ 1.84
COMMD6-203ENST00000377615 ERICH3Q5RHP9 1530 aa26.57■■□□□ 1.84
COMMD6-203ENST00000377615 CARMIL1Q5VZK9 1371 aa26.56■■□□□ 1.84
COMMD6-203ENST00000377615 ZNF608Q9ULD9 1512 aaPredicted RBP26.54■■□□□ 1.84
COMMD6-203ENST00000377615 AQRO60306 1485 aaKnown RBP eCLIP26.54■■□□□ 1.84
COMMD6-203ENST00000377615 CUL7Q14999 1698 aa26.47■■□□□ 1.83
COMMD6-203ENST00000377615 CEP162Q5TB80 1403 aa26.45■■□□□ 1.83
COMMD6-203ENST00000377615 PBRM1Q86U86 1689 aa26.44■■□□□ 1.82
COMMD6-203ENST00000377615 EIF4G3O43432 1585 aaKnown RBP26.43■■□□□ 1.82
COMMD6-203ENST00000377615 GRIN2BQ13224 1484 aa26.42■■□□□ 1.82
COMMD6-203ENST00000377615 RANGAP1P46060 587 aaPredicted RBP26.35■■□□□ 1.81
COMMD6-203ENST00000377615 ADAMTS12P58397 1594 aa26.31■■□□□ 1.8
COMMD6-203ENST00000377615 FHAD1B1AJZ9 1412 aa26.31■■□□□ 1.8
COMMD6-203ENST00000377615 SNAPC4Q5SXM2 1469 aa26.3■■□□□ 1.8
COMMD6-203ENST00000377615 CLIP1P30622 1438 aa26.29■■□□□ 1.8
COMMD6-203ENST00000377615 MAGI1Q96QZ7 1491 aaPredicted RBP26.2■■□□□ 1.78
COMMD6-203ENST00000377615 CTTNBP2Q8WZ74 1663 aa26.15■■□□□ 1.78
COMMD6-203ENST00000377615 SYNJ2O15056 1496 aa26.12■■□□□ 1.77
COMMD6-203ENST00000377615 CHMP7Q8WUX9 453 aaPredicted RBP26.1■■□□□ 1.77
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms