RNA–Protein interactions for RNA: ENST00000376713.3

PRUNE2-202, Transcript of prune homolog 2, humanhuman

TSL 5 BASIC

Gene PRUNE2, Length 1,069 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRUNE2-202ENST00000376713 NISCHQ9Y2I1 1504 aa41.16■■■■■ 4.18
PRUNE2-202ENST00000376713 CCDC180Q9P1Z9 1646 aa36.8■■■■□ 3.48
PRUNE2-202ENST00000376713 ABCC9O60706 1549 aa36.37■■■■□ 3.41
PRUNE2-202ENST00000376713 RB1CC1Q8TDY2 1594 aa34.83■■■■□ 3.17
PRUNE2-202ENST00000376713 NACADO15069 1562 aa34.71■■■■□ 3.15
PRUNE2-202ENST00000376713 MYO15BQ96JP2 1530 aa34.44■■■■□ 3.1
PRUNE2-202ENST00000376713 DCAF8L2P0C7V8 631 aa34.37■■■■□ 3.09
PRUNE2-202ENST00000376713 ZCCHC6Q5VYS8 1495 aaKnown RBP34.22■■■■□ 3.07
PRUNE2-202ENST00000376713 DCAF1Q9Y4B6 1507 aa34.09■■■■□ 3.05
PRUNE2-202ENST00000376713 UNC13AQ9UPW8 1703 aa33.97■■■■□ 3.03
PRUNE2-202ENST00000376713 PABPN1Q86U42 306 aaKnown RBP eCLIP33.88■■■■□ 3.01
PRUNE2-202ENST00000376713 BICRAQ9NZM4 1560 aa33.81■■■■□ 3
PRUNE2-202ENST00000376713 DNAJC5BQ9UF47 199 aa33.8■■■■□ 3
PRUNE2-202ENST00000376713 SHROOM4Q9ULL8 1493 aa33.51■■■□□ 2.96
PRUNE2-202ENST00000376713 SCRIBQ14160 1630 aa33.47■■■□□ 2.95
PRUNE2-202ENST00000376713 EIF4G1Q04637 1599 aaKnown RBP32.96■■■□□ 2.87
PRUNE2-202ENST00000376713 CC2D2AQ9P2K1 1620 aa32.91■■■□□ 2.86
PRUNE2-202ENST00000376713 CECR2Q9BXF3 1484 aa32.77■■■□□ 2.84
PRUNE2-202ENST00000376713 NCAPD3P42695 1498 aa32.06■■■□□ 2.72
PRUNE2-202ENST00000376713 SMARCA4P51532 1647 aa32.01■■■□□ 2.72
PRUNE2-202ENST00000376713 ATAD2BQ9ULI0 1458 aa31.98■■■□□ 2.71
PRUNE2-202ENST00000376713 BAZ1AQ9NRL2 1556 aaPredicted RBP31.93■■■□□ 2.7
PRUNE2-202ENST00000376713 SMARCA2P51531 1590 aa31.91■■■□□ 2.7
PRUNE2-202ENST00000376713 HMGXB3Q12766 1538 aa31.86■■■□□ 2.69
PRUNE2-202ENST00000376713 PEG3Q9GZU2 1588 aa31.77■■■□□ 2.68
PRUNE2-202ENST00000376713 MROH2BQ7Z745 1585 aa31.68■■■□□ 2.66
PRUNE2-202ENST00000376713 BAZ1BQ9UIG0 1483 aaKnown RBP31.66■■■□□ 2.66
PRUNE2-202ENST00000376713 ERCC6Q03468 1493 aa31.39■■■□□ 2.62
PRUNE2-202ENST00000376713 NESP48681 1621 aa31.35■■■□□ 2.61
PRUNE2-202ENST00000376713 CUX2O14529 1486 aa31.3■■■□□ 2.6
PRUNE2-202ENST00000376713 WIZO95785 1651 aa31.27■■■□□ 2.6
PRUNE2-202ENST00000376713 LAMC3Q9Y6N6 1575 aa31.25■■■□□ 2.59
PRUNE2-202ENST00000376713 RSF1Q96T23 1441 aaPredicted RBP31.18■■■□□ 2.58
PRUNE2-202ENST00000376713 CADPSQ9ULU8 1353 aa31.06■■■□□ 2.56
PRUNE2-202ENST00000376713 PDS5BQ9NTI5 1447 aa31.05■■■□□ 2.56
PRUNE2-202ENST00000376713 THOC2Q8NI27 1593 aaKnown RBP31.03■■■□□ 2.56
PRUNE2-202ENST00000376713 TOP2AP11388 1531 aaKnown RBP30.98■■■□□ 2.55
PRUNE2-202ENST00000376713 KIF21AQ7Z4S6 1674 aa30.93■■■□□ 2.54
PRUNE2-202ENST00000376713 DNAJC5Q9H3Z4 198 aa30.82■■■□□ 2.52
PRUNE2-202ENST00000376713 CFTRP13569 1480 aa30.82■■■□□ 2.52
PRUNE2-202ENST00000376713 MRC2Q9UBG0 1479 aa30.77■■■□□ 2.52
PRUNE2-202ENST00000376713 WDR62O43379 1518 aa30.71■■■□□ 2.51
PRUNE2-202ENST00000376713 CEP164Q9UPV0 1460 aa30.7■■■□□ 2.51
PRUNE2-202ENST00000376713 FANCD2Q9BXW9 1451 aa30.7■■■□□ 2.5
PRUNE2-202ENST00000376713 CCDC88BA6NC98 1476 aa30.59■■■□□ 2.49
PRUNE2-202ENST00000376713 PRDM2Q13029 1718 aa30.46■■■□□ 2.47
PRUNE2-202ENST00000376713 URB2Q14146 1524 aaKnown RBP30.42■■■□□ 2.46
PRUNE2-202ENST00000376713 TOPBP1Q92547 1522 aa30.16■■■□□ 2.42
PRUNE2-202ENST00000376713 ABCC8Q09428 1581 aa30.14■■■□□ 2.42
PRUNE2-202ENST00000376713 DNMBPQ6XZF7 1577 aa30.09■■■□□ 2.41
PRUNE2-202ENST00000376713 IFT140Q96RY7 1462 aa30.09■■■□□ 2.41
PRUNE2-202ENST00000376713 ZNF608Q9ULD9 1512 aaPredicted RBP29.97■■■□□ 2.39
PRUNE2-202ENST00000376713 POLA1P09884 1462 aaPredicted RBP29.88■■■□□ 2.37
PRUNE2-202ENST00000376713 SUPT5HO00267 1087 aaKnown RBP29.88■■■□□ 2.37
PRUNE2-202ENST00000376713 TARBP1Q13395 1621 aaKnown RBP29.87■■■□□ 2.37
PRUNE2-202ENST00000376713 EIF4G3O43432 1585 aaKnown RBP29.84■■■□□ 2.37
PRUNE2-202ENST00000376713 OSCARQ8IYS5 282 aa29.83■■■□□ 2.37
PRUNE2-202ENST00000376713 CUX1P39880 1505 aa29.76■■■□□ 2.36
PRUNE2-202ENST00000376713 AQRO60306 1485 aaKnown RBP eCLIP29.73■■■□□ 2.35
PRUNE2-202ENST00000376713 FGD5Q6ZNL6 1462 aa29.73■■■□□ 2.35
PRUNE2-202ENST00000376713 RAD54L2Q9Y4B4 1467 aa29.71■■■□□ 2.35
PRUNE2-202ENST00000376713 SOGA1O94964 1423 aa29.71■■■□□ 2.35
PRUNE2-202ENST00000376713 WDR97A6NE52 1622 aa29.66■■■□□ 2.34
PRUNE2-202ENST00000376713 TDRD9Q8NDG6 1382 aaKnown RBP29.58■■■□□ 2.33
PRUNE2-202ENST00000376713 TRIM41Q8WV44 630 aa29.5■■■□□ 2.31
PRUNE2-202ENST00000376713 CHD1O14646 1710 aa29.49■■■□□ 2.31
PRUNE2-202ENST00000376713 SNAPC4Q5SXM2 1469 aa29.46■■■□□ 2.31
PRUNE2-202ENST00000376713 ABCA10Q8WWZ4 1543 aa29.45■■■□□ 2.31
PRUNE2-202ENST00000376713 GRIN2BQ13224 1484 aa29.45■■■□□ 2.31
PRUNE2-202ENST00000376713 MAGI1Q96QZ7 1491 aaPredicted RBP29.45■■■□□ 2.31
PRUNE2-202ENST00000376713 RIMBP3CA6NJZ7 1639 aa29.42■■■□□ 2.3
PRUNE2-202ENST00000376713 RIMBP3BA6NNM3 1639 aa29.42■■■□□ 2.3
PRUNE2-202ENST00000376713 RIMBP3Q9UFD9 1639 aa29.42■■■□□ 2.3
PRUNE2-202ENST00000376713 ARHGEF11O15085 1522 aa29.41■■■□□ 2.3
PRUNE2-202ENST00000376713 WRNQ14191 1432 aaPredicted RBP eCLIP29.39■■■□□ 2.3
PRUNE2-202ENST00000376713 TOP2BQ02880 1626 aa29.38■■■□□ 2.29
PRUNE2-202ENST00000376713 BIVM-ERCC5R4GMW8 1640 aa29.38■■■□□ 2.29
PRUNE2-202ENST00000376713 GAPVD1Q14C86 1478 aa29.37■■■□□ 2.29
PRUNE2-202ENST00000376713 FBLN2P98095 1184 aa29.37■■■□□ 2.29
PRUNE2-202ENST00000376713 ABCA5Q8WWZ7 1642 aa29.37■■■□□ 2.29
PRUNE2-202ENST00000376713 SYNJ1O43426 1573 aa29.34■■■□□ 2.29
PRUNE2-202ENST00000376713 SYNJ2O15056 1496 aa29.33■■■□□ 2.29
PRUNE2-202ENST00000376713 PBRM1Q86U86 1689 aa29.3■■■□□ 2.28
PRUNE2-202ENST00000376713 CLASP1Q7Z460 1538 aa29.26■■■□□ 2.27
PRUNE2-202ENST00000376713 CHMP7Q8WUX9 453 aaPredicted RBP29.26■■■□□ 2.27
PRUNE2-202ENST00000376713 ARAP1Q96P48 1450 aa29.15■■■□□ 2.26
PRUNE2-202ENST00000376713 ADAMTS12P58397 1594 aa29.12■■■□□ 2.25
PRUNE2-202ENST00000376713 ERICH3Q5RHP9 1530 aa29.09■■■□□ 2.25
PRUNE2-202ENST00000376713 GRIN2AQ12879 1464 aa29.08■■■□□ 2.25
PRUNE2-202ENST00000376713 CYB5RLQ6IPT4 315 aa29.07■■■□□ 2.24
PRUNE2-202ENST00000376713 FHAD1B1AJZ9 1412 aa29.04■■■□□ 2.24
PRUNE2-202ENST00000376713 NUP160Q12769 1436 aa29.01■■■□□ 2.23
PRUNE2-202ENST00000376713 CEP170Q5SW79 1584 aa28.94■■■□□ 2.22
PRUNE2-202ENST00000376713 SHROOM2Q13796 1616 aa28.82■■■□□ 2.2
PRUNE2-202ENST00000376713 KIF27Q86VH2 1401 aa28.81■■■□□ 2.2
PRUNE2-202ENST00000376713 ERCC6L2Q5T890 1561 aa28.76■■■□□ 2.19
PRUNE2-202ENST00000376713 IGF1RP08069 1367 aa28.75■■■□□ 2.19
PRUNE2-202ENST00000376713 CUL7Q14999 1698 aa28.7■■■□□ 2.19
PRUNE2-202ENST00000376713 RUSC2Q8N2Y8 1516 aa28.7■■■□□ 2.19
PRUNE2-202ENST00000376713 PRG4Q92954 1404 aaPredicted RBP28.62■■■□□ 2.17
Retrieved 100 of 20,778 RNA–protein pairs in 7.9 ms