RNA–Protein interactions for RNA: ENST00000375894.9

CTSL-204, Transcript of cathepsin L, humanhuman

TSL 3

Gene CTSL, Length 975 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSL-204ENST00000375894 NISCHQ9Y2I1 1504 aa34.58■■■■□ 3.13
CTSL-204ENST00000375894 ABCC9O60706 1549 aa31.47■■■□□ 2.63
CTSL-204ENST00000375894 CCDC180Q9P1Z9 1646 aa31.28■■■□□ 2.6
CTSL-204ENST00000375894 RB1CC1Q8TDY2 1594 aa29.86■■■□□ 2.37
CTSL-204ENST00000375894 DNAJC5BQ9UF47 199 aa29.66■■■□□ 2.34
CTSL-204ENST00000375894 NACADO15069 1562 aa29.54■■■□□ 2.32
CTSL-204ENST00000375894 UNC13AQ9UPW8 1703 aa29.37■■■□□ 2.29
CTSL-204ENST00000375894 DCAF8L2P0C7V8 631 aa29.32■■■□□ 2.28
CTSL-204ENST00000375894 PABPN1Q86U42 306 aaKnown RBP eCLIP29.2■■■□□ 2.26
CTSL-204ENST00000375894 BICRAQ9NZM4 1560 aa28.98■■■□□ 2.23
CTSL-204ENST00000375894 MYO15BQ96JP2 1530 aa28.97■■■□□ 2.23
CTSL-204ENST00000375894 ZCCHC6Q5VYS8 1495 aaKnown RBP28.6■■■□□ 2.17
CTSL-204ENST00000375894 DCAF1Q9Y4B6 1507 aa28.52■■■□□ 2.16
CTSL-204ENST00000375894 SHROOM4Q9ULL8 1493 aa28.49■■■□□ 2.15
CTSL-204ENST00000375894 SCRIBQ14160 1630 aa28.49■■■□□ 2.15
CTSL-204ENST00000375894 CC2D2AQ9P2K1 1620 aa28.45■■■□□ 2.14
CTSL-204ENST00000375894 CECR2Q9BXF3 1484 aa28.35■■■□□ 2.13
CTSL-204ENST00000375894 EIF4G1Q04637 1599 aaKnown RBP28.29■■■□□ 2.12
CTSL-204ENST00000375894 DNAJC5Q9H3Z4 198 aa27.43■■□□□ 1.98
CTSL-204ENST00000375894 ERCC6Q03468 1493 aa27.21■■□□□ 1.95
CTSL-204ENST00000375894 NCAPD3P42695 1498 aa27.2■■□□□ 1.95
CTSL-204ENST00000375894 CUX2O14529 1486 aa27.19■■□□□ 1.94
CTSL-204ENST00000375894 SMARCA4P51532 1647 aa27.12■■□□□ 1.93
CTSL-204ENST00000375894 ATAD2BQ9ULI0 1458 aa27.11■■□□□ 1.93
CTSL-204ENST00000375894 SMARCA2P51531 1590 aa27.08■■□□□ 1.93
CTSL-204ENST00000375894 HMGXB3Q12766 1538 aa27.06■■□□□ 1.92
CTSL-204ENST00000375894 NESP48681 1621 aa26.95■■□□□ 1.91
CTSL-204ENST00000375894 BAZ1AQ9NRL2 1556 aaPredicted RBP26.89■■□□□ 1.9
CTSL-204ENST00000375894 BAZ1BQ9UIG0 1483 aaKnown RBP26.89■■□□□ 1.9
CTSL-204ENST00000375894 THOC2Q8NI27 1593 aaKnown RBP26.79■■□□□ 1.88
CTSL-204ENST00000375894 PEG3Q9GZU2 1588 aa26.79■■□□□ 1.88
CTSL-204ENST00000375894 KIF21AQ7Z4S6 1674 aa26.75■■□□□ 1.87
CTSL-204ENST00000375894 LAMC3Q9Y6N6 1575 aa26.73■■□□□ 1.87
CTSL-204ENST00000375894 MROH2BQ7Z745 1585 aa26.67■■□□□ 1.86
CTSL-204ENST00000375894 PDS5BQ9NTI5 1447 aa26.52■■□□□ 1.84
CTSL-204ENST00000375894 WIZO95785 1651 aa26.42■■□□□ 1.82
CTSL-204ENST00000375894 CADPSQ9ULU8 1353 aa26.36■■□□□ 1.81
CTSL-204ENST00000375894 MRC2Q9UBG0 1479 aa26.35■■□□□ 1.81
CTSL-204ENST00000375894 WDR62O43379 1518 aa26.3■■□□□ 1.8
CTSL-204ENST00000375894 TRIM41Q8WV44 630 aa26.21■■□□□ 1.79
CTSL-204ENST00000375894 CEP164Q9UPV0 1460 aa26.2■■□□□ 1.78
CTSL-204ENST00000375894 FANCD2Q9BXW9 1451 aa26.13■■□□□ 1.77
CTSL-204ENST00000375894 PRDM2Q13029 1718 aa26.03■■□□□ 1.76
CTSL-204ENST00000375894 CFTRP13569 1480 aa26.02■■□□□ 1.76
CTSL-204ENST00000375894 TOP2AP11388 1531 aaKnown RBP26■■□□□ 1.75
CTSL-204ENST00000375894 RSF1Q96T23 1441 aaPredicted RBP25.96■■□□□ 1.75
CTSL-204ENST00000375894 URB2Q14146 1524 aaKnown RBP25.94■■□□□ 1.74
CTSL-204ENST00000375894 OSCARQ8IYS5 282 aa25.86■■□□□ 1.73
CTSL-204ENST00000375894 RIMBP3CA6NJZ7 1639 aa25.7■■□□□ 1.71
CTSL-204ENST00000375894 RIMBP3BA6NNM3 1639 aa25.7■■□□□ 1.71
CTSL-204ENST00000375894 RIMBP3Q9UFD9 1639 aa25.7■■□□□ 1.71
CTSL-204ENST00000375894 CCDC88BA6NC98 1476 aa25.66■■□□□ 1.7
CTSL-204ENST00000375894 ZNF608Q9ULD9 1512 aaPredicted RBP25.66■■□□□ 1.7
CTSL-204ENST00000375894 IFT140Q96RY7 1462 aa25.66■■□□□ 1.7
CTSL-204ENST00000375894 TOPBP1Q92547 1522 aa25.62■■□□□ 1.69
CTSL-204ENST00000375894 EIF4G3O43432 1585 aaKnown RBP25.59■■□□□ 1.69
CTSL-204ENST00000375894 CHD1O14646 1710 aa25.55■■□□□ 1.68
CTSL-204ENST00000375894 DNMBPQ6XZF7 1577 aa25.53■■□□□ 1.68
CTSL-204ENST00000375894 ARHGEF11O15085 1522 aa25.53■■□□□ 1.68
CTSL-204ENST00000375894 ABCC8Q09428 1581 aa25.51■■□□□ 1.67
CTSL-204ENST00000375894 TARBP1Q13395 1621 aaKnown RBP25.45■■□□□ 1.66
CTSL-204ENST00000375894 AQRO60306 1485 aaKnown RBP eCLIP25.38■■□□□ 1.657e-6■□□□□ 9.9
CTSL-204ENST00000375894 POLA1P09884 1462 aaPredicted RBP25.32■■□□□ 1.64
CTSL-204ENST00000375894 CYB5RLQ6IPT4 315 aa25.31■■□□□ 1.64
CTSL-204ENST00000375894 FBLN2P98095 1184 aa25.29■■□□□ 1.64
CTSL-204ENST00000375894 ARAP1Q96P48 1450 aa25.24■■□□□ 1.63
CTSL-204ENST00000375894 RAD54L2Q9Y4B4 1467 aa25.24■■□□□ 1.63
CTSL-204ENST00000375894 SOGA1O94964 1423 aa25.18■■□□□ 1.62
CTSL-204ENST00000375894 TDRD9Q8NDG6 1382 aaKnown RBP25.17■■□□□ 1.62
CTSL-204ENST00000375894 TRHP20396 242 aaPredicted RBP25.16■■□□□ 1.62
CTSL-204ENST00000375894 WDR97A6NE52 1622 aa25.15■■□□□ 1.62
CTSL-204ENST00000375894 SNAPC4Q5SXM2 1469 aa25.15■■□□□ 1.62
CTSL-204ENST00000375894 FGD5Q6ZNL6 1462 aa25.15■■□□□ 1.62
CTSL-204ENST00000375894 CLASP1Q7Z460 1538 aa25.09■■□□□ 1.61
CTSL-204ENST00000375894 SYNJ1O43426 1573 aa25.09■■□□□ 1.61
CTSL-204ENST00000375894 CUX1P39880 1505 aa25.08■■□□□ 1.61
CTSL-204ENST00000375894 PBRM1Q86U86 1689 aa25.08■■□□□ 1.61
CTSL-204ENST00000375894 MAGI1Q96QZ7 1491 aaPredicted RBP25.05■■□□□ 1.6
CTSL-204ENST00000375894 CHMP7Q8WUX9 453 aaPredicted RBP25.02■■□□□ 1.6
CTSL-204ENST00000375894 GRIN2BQ13224 1484 aa25.01■■□□□ 1.59
CTSL-204ENST00000375894 SYNJ2O15056 1496 aa24.96■■□□□ 1.59
CTSL-204ENST00000375894 GAPVD1Q14C86 1478 aa24.89■■□□□ 1.58
CTSL-204ENST00000375894 ABCA5Q8WWZ7 1642 aa24.88■■□□□ 1.57
CTSL-204ENST00000375894 ABCA10Q8WWZ4 1543 aa24.81■■□□□ 1.56
CTSL-204ENST00000375894 ADAMTS12P58397 1594 aa24.71■■□□□ 1.55
CTSL-204ENST00000375894 ERCC6L2Q5T890 1561 aa24.71■■□□□ 1.55
CTSL-204ENST00000375894 GRIN2AQ12879 1464 aa24.7■■□□□ 1.55
CTSL-204ENST00000375894 BIVM-ERCC5R4GMW8 1640 aa24.68■■□□□ 1.54
CTSL-204ENST00000375894 CEP170Q5SW79 1584 aa24.67■■□□□ 1.54
CTSL-204ENST00000375894 SUPT5HO00267 1087 aaKnown RBP24.65■■□□□ 1.54
CTSL-204ENST00000375894 WRNQ14191 1432 aaPredicted RBP eCLIP24.65■■□□□ 1.54
CTSL-204ENST00000375894 AEBP2Q6ZN18 517 aaPredicted RBP24.64■■□□□ 1.54
CTSL-204ENST00000375894 TOP2BQ02880 1626 aa24.63■■□□□ 1.53
CTSL-204ENST00000375894 SHROOM2Q13796 1616 aa24.61■■□□□ 1.53
CTSL-204ENST00000375894 NUP160Q12769 1436 aa24.59■■□□□ 1.53
CTSL-204ENST00000375894 KIF13AQ9H1H9 1805 aa24.56■■□□□ 1.52
CTSL-204ENST00000375894 FHAD1B1AJZ9 1412 aa24.53■■□□□ 1.52
CTSL-204ENST00000375894 ERICH3Q5RHP9 1530 aa24.51■■□□□ 1.51
CTSL-204ENST00000375894 PRG4Q92954 1404 aaPredicted RBP24.4■■□□□ 1.5
CTSL-204ENST00000375894 RUSC2Q8N2Y8 1516 aa24.38■■□□□ 1.49
Retrieved 100 of 20,778 RNA–protein pairs in 64.1 ms