RNA–Protein interactions for RNA: ENST00000374215.5

UBXN11-203, Transcript of UBX domain protein 11, humanhuman

TSL 5

Gene UBXN11, Length 938 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN11-203ENST00000374215 NISCHQ9Y2I1 1504 aa28.12■■■□□ 2.09
UBXN11-203ENST00000374215 CCDC180Q9P1Z9 1646 aa24.75■■□□□ 1.55
UBXN11-203ENST00000374215 ABCC9O60706 1549 aa24.53■■□□□ 1.52
UBXN11-203ENST00000374215 ZCCHC6Q5VYS8 1495 aaKnown RBP23.55■■□□□ 1.36
UBXN11-203ENST00000374215 DCAF8L2P0C7V8 631 aa23.48■■□□□ 1.35
UBXN11-203ENST00000374215 RB1CC1Q8TDY2 1594 aa23.31■■□□□ 1.32
UBXN11-203ENST00000374215 NACADO15069 1562 aa23.2■■□□□ 1.3
UBXN11-203ENST00000374215 DCAF1Q9Y4B6 1507 aa23.2■■□□□ 1.3
UBXN11-203ENST00000374215 DNAJC5BQ9UF47 199 aa23.07■■□□□ 1.28
UBXN11-203ENST00000374215 MYO15BQ96JP2 1530 aa23.07■■□□□ 1.28
UBXN11-203ENST00000374215 UNC13AQ9UPW8 1703 aa22.89■■□□□ 1.26
UBXN11-203ENST00000374215 PABPN1Q86U42 306 aaKnown RBP eCLIP22.86■■□□□ 1.25
UBXN11-203ENST00000374215 SCRIBQ14160 1630 aa22.78■■□□□ 1.24
UBXN11-203ENST00000374215 SHROOM4Q9ULL8 1493 aa22.77■■□□□ 1.24
UBXN11-203ENST00000374215 BICRAQ9NZM4 1560 aa22.71■■□□□ 1.23
UBXN11-203ENST00000374215 CC2D2AQ9P2K1 1620 aa22.14■■□□□ 1.14
UBXN11-203ENST00000374215 CECR2Q9BXF3 1484 aa22.1■■□□□ 1.13
UBXN11-203ENST00000374215 EIF4G1Q04637 1599 aaKnown RBP22.08■■□□□ 1.12
UBXN11-203ENST00000374215 BAZ1AQ9NRL2 1556 aaPredicted RBP21.78■■□□□ 1.08
UBXN11-203ENST00000374215 SMARCA4P51532 1647 aa21.74■■□□□ 1.07
UBXN11-203ENST00000374215 MROH2BQ7Z745 1585 aa21.72■■□□□ 1.07
UBXN11-203ENST00000374215 SUPT5HO00267 1087 aaKnown RBP21.67■■□□□ 1.06
UBXN11-203ENST00000374215 RSF1Q96T23 1441 aaPredicted RBP21.63■■□□□ 1.05
UBXN11-203ENST00000374215 WIZO95785 1651 aa21.55■■□□□ 1.04
UBXN11-203ENST00000374215 ATAD2BQ9ULI0 1458 aa21.48■■□□□ 1.03
UBXN11-203ENST00000374215 SMARCA2P51531 1590 aa21.47■■□□□ 1.03
UBXN11-203ENST00000374215 NCAPD3P42695 1498 aa21.43■■□□□ 1.02
UBXN11-203ENST00000374215 PEG3Q9GZU2 1588 aa21.41■■□□□ 1.02
UBXN11-203ENST00000374215 BAZ1BQ9UIG0 1483 aaKnown RBP21.38■■□□□ 1.01
UBXN11-203ENST00000374215 TOP2AP11388 1531 aaKnown RBP21.32■■□□□ 1
UBXN11-203ENST00000374215 HMGXB3Q12766 1538 aa21.32■■□□□ 1
UBXN11-203ENST00000374215 DNAJC5Q9H3Z4 198 aa21.26■□□□□ 0.99
UBXN11-203ENST00000374215 ERCC6Q03468 1493 aa21.21■□□□□ 0.99
UBXN11-203ENST00000374215 CUX2O14529 1486 aa21.15■□□□□ 0.98
UBXN11-203ENST00000374215 NESP48681 1621 aa21.13■□□□□ 0.97
UBXN11-203ENST00000374215 CCDC88BA6NC98 1476 aa21.07■□□□□ 0.96
UBXN11-203ENST00000374215 LAMC3Q9Y6N6 1575 aa20.88■□□□□ 0.93
UBXN11-203ENST00000374215 KIF21AQ7Z4S6 1674 aa20.84■□□□□ 0.93
UBXN11-203ENST00000374215 CADPSQ9ULU8 1353 aa20.81■□□□□ 0.92
UBXN11-203ENST00000374215 THOC2Q8NI27 1593 aaKnown RBP20.8■□□□□ 0.92
UBXN11-203ENST00000374215 PDS5BQ9NTI5 1447 aa20.79■□□□□ 0.92
UBXN11-203ENST00000374215 CFTRP13569 1480 aa20.73■□□□□ 0.91
UBXN11-203ENST00000374215 PRDM2Q13029 1718 aa20.67■□□□□ 0.9
UBXN11-203ENST00000374215 FANCD2Q9BXW9 1451 aa20.62■□□□□ 0.89
UBXN11-203ENST00000374215 MRC2Q9UBG0 1479 aa20.59■□□□□ 0.89
UBXN11-203ENST00000374215 CEP164Q9UPV0 1460 aa20.58■□□□□ 0.89
UBXN11-203ENST00000374215 WDR62O43379 1518 aa20.54■□□□□ 0.88
UBXN11-203ENST00000374215 ABCC8Q09428 1581 aa20.53■□□□□ 0.88
UBXN11-203ENST00000374215 URB2Q14146 1524 aaKnown RBP20.48■□□□□ 0.87
UBXN11-203ENST00000374215 WRNQ14191 1432 aaPredicted RBP eCLIP20.44■□□□□ 0.86
UBXN11-203ENST00000374215 CHIC1Q5VXU3 224 aa20.43■□□□□ 0.86
UBXN11-203ENST00000374215 TRIM41Q8WV44 630 aa20.38■□□□□ 0.85
UBXN11-203ENST00000374215 SYNJ1O43426 1573 aa20.37■□□□□ 0.85
UBXN11-203ENST00000374215 CUX1P39880 1505 aa20.36■□□□□ 0.85
UBXN11-203ENST00000374215 DNMBPQ6XZF7 1577 aa20.33■□□□□ 0.84
UBXN11-203ENST00000374215 TOPBP1Q92547 1522 aa20.3■□□□□ 0.84
UBXN11-203ENST00000374215 TOP2BQ02880 1626 aa20.3■□□□□ 0.84
UBXN11-203ENST00000374215 BIVM-ERCC5R4GMW8 1640 aa20.29■□□□□ 0.84
UBXN11-203ENST00000374215 OSCARQ8IYS5 282 aa20.25■□□□□ 0.83
UBXN11-203ENST00000374215 FGD5Q6ZNL6 1462 aa20.23■□□□□ 0.83
UBXN11-203ENST00000374215 ZNF608Q9ULD9 1512 aaPredicted RBP20.19■□□□□ 0.82
UBXN11-203ENST00000374215 POLA1P09884 1462 aaPredicted RBP20.16■□□□□ 0.82
UBXN11-203ENST00000374215 IFT140Q96RY7 1462 aa20.13■□□□□ 0.81
UBXN11-203ENST00000374215 RAD54L2Q9Y4B4 1467 aa20.11■□□□□ 0.81
UBXN11-203ENST00000374215 SOGA1O94964 1423 aa20.1■□□□□ 0.81
UBXN11-203ENST00000374215 TARBP1Q13395 1621 aaKnown RBP20.09■□□□□ 0.81
UBXN11-203ENST00000374215 EIF4G3O43432 1585 aaKnown RBP20.06■□□□□ 0.8
UBXN11-203ENST00000374215 FAM9AQ8IZU1 332 aaPredicted RBP20.06■□□□□ 0.8
UBXN11-203ENST00000374215 AQRO60306 1485 aaKnown RBP eCLIP20.02■□□□□ 0.85e-19■■■■■ 28
UBXN11-203ENST00000374215 ABCA10Q8WWZ4 1543 aa19.99■□□□□ 0.79
UBXN11-203ENST00000374215 WDR97A6NE52 1622 aa19.98■□□□□ 0.79
UBXN11-203ENST00000374215 RUSC2Q8N2Y8 1516 aa19.97■□□□□ 0.79
UBXN11-203ENST00000374215 KIF27Q86VH2 1401 aa19.96■□□□□ 0.79
UBXN11-203ENST00000374215 TDRD9Q8NDG6 1382 aaKnown RBP19.95■□□□□ 0.79
UBXN11-203ENST00000374215 RIMBP3CA6NJZ7 1639 aa19.91■□□□□ 0.78
UBXN11-203ENST00000374215 RIMBP3BA6NNM3 1639 aa19.91■□□□□ 0.78
UBXN11-203ENST00000374215 RIMBP3Q9UFD9 1639 aa19.91■□□□□ 0.78
UBXN11-203ENST00000374215 EEA1Q15075 1411 aa19.9■□□□□ 0.78
UBXN11-203ENST00000374215 ABCA5Q8WWZ7 1642 aa19.88■□□□□ 0.77
UBXN11-203ENST00000374215 GAPVD1Q14C86 1478 aa19.88■□□□□ 0.77
UBXN11-203ENST00000374215 FBLN2P98095 1184 aa19.85■□□□□ 0.77
UBXN11-203ENST00000374215 EHMT2Q96KQ7 1210 aa19.85■□□□□ 0.77
UBXN11-203ENST00000374215 ARHGEF11O15085 1522 aa19.85■□□□□ 0.77
UBXN11-203ENST00000374215 CHD1O14646 1710 aa19.85■□□□□ 0.77
UBXN11-203ENST00000374215 PBRM1Q86U86 1689 aa19.83■□□□□ 0.76
UBXN11-203ENST00000374215 SNAPC4Q5SXM2 1469 aa19.82■□□□□ 0.76
UBXN11-203ENST00000374215 CSRNP3Q8WYN3 585 aa19.82■□□□□ 0.76
UBXN11-203ENST00000374215 GRIN2BQ13224 1484 aa19.79■□□□□ 0.76
UBXN11-203ENST00000374215 CYB5RLQ6IPT4 315 aa19.79■□□□□ 0.76
UBXN11-203ENST00000374215 ERICH3Q5RHP9 1530 aa19.76■□□□□ 0.75
UBXN11-203ENST00000374215 IGF1RP08069 1367 aa19.76■□□□□ 0.75
UBXN11-203ENST00000374215 CUL7Q14999 1698 aa19.73■□□□□ 0.75
UBXN11-203ENST00000374215 ADAMTS12P58397 1594 aa19.7■□□□□ 0.74
UBXN11-203ENST00000374215 CARMIL1Q5VZK9 1371 aa19.7■□□□□ 0.74
UBXN11-203ENST00000374215 KIF21BO75037 1637 aa19.69■□□□□ 0.74
UBXN11-203ENST00000374215 MAGI1Q96QZ7 1491 aaPredicted RBP19.68■□□□□ 0.74
UBXN11-203ENST00000374215 CHMP7Q8WUX9 453 aaPredicted RBP19.68■□□□□ 0.74
UBXN11-203ENST00000374215 GOLGA3Q08378 1498 aa19.66■□□□□ 0.74
UBXN11-203ENST00000374215 PRXQ9BXM0 1461 aa19.66■□□□□ 0.74
UBXN11-203ENST00000374215 LOC105371045A0A1W2PR82 267 aa19.65■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 9 ms