RNA–Protein interactions for RNA: ENST00000374213.2

CD52-201, Transcript of CD52 molecule, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CD52, Length 468 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD52-201ENST00000374213 NISCHQ9Y2I1 1504 aa16.24■□□□□ 0.19
CD52-201ENST00000374213 CCDC180Q9P1Z9 1646 aa14.72□□□□□ -0.05
CD52-201ENST00000374213 ABCC9O60706 1549 aa14.4□□□□□ -0.1
CD52-201ENST00000374213 AEBP2Q6ZN18 517 aaPredicted RBP13.92□□□□□ -0.18
CD52-201ENST00000374213 RB1CC1Q8TDY2 1594 aa13.83□□□□□ -0.19
CD52-201ENST00000374213 UNC13AQ9UPW8 1703 aa13.8□□□□□ -0.2
CD52-201ENST00000374213 NACADO15069 1562 aa13.74□□□□□ -0.21
CD52-201ENST00000374213 MYO15BQ96JP2 1530 aa13.56□□□□□ -0.24
CD52-201ENST00000374213 ZCCHC6Q5VYS8 1495 aaKnown RBP13.52□□□□□ -0.25
CD52-201ENST00000374213 BICRAQ9NZM4 1560 aa13.46□□□□□ -0.25
CD52-201ENST00000374213 DCAF1Q9Y4B6 1507 aa13.44□□□□□ -0.26
CD52-201ENST00000374213 DCAF8L2P0C7V8 631 aa13.43□□□□□ -0.26
CD52-201ENST00000374213 SCRIBQ14160 1630 aa13.34□□□□□ -0.27
CD52-201ENST00000374213 DNAJC5BQ9UF47 199 aa13.3□□□□□ -0.28
CD52-201ENST00000374213 PABPN1Q86U42 306 aaKnown RBP eCLIP13.29□□□□□ -0.28
CD52-201ENST00000374213 SHROOM4Q9ULL8 1493 aa13.23□□□□□ -0.29
CD52-201ENST00000374213 CHIC1Q5VXU3 224 aa13.23□□□□□ -0.29
CD52-201ENST00000374213 CC2D2AQ9P2K1 1620 aa13.12□□□□□ -0.31
CD52-201ENST00000374213 EIF4G1Q04637 1599 aaKnown RBP13.1□□□□□ -0.31
CD52-201ENST00000374213 CECR2Q9BXF3 1484 aa12.95□□□□□ -0.34
CD52-201ENST00000374213 SMARCA4P51532 1647 aa12.74□□□□□ -0.37
CD52-201ENST00000374213 HMGXB3Q12766 1538 aa12.63□□□□□ -0.39
CD52-201ENST00000374213 SMARCA2P51531 1590 aa12.63□□□□□ -0.39
CD52-201ENST00000374213 BAZ1AQ9NRL2 1556 aaPredicted RBP12.62□□□□□ -0.39
CD52-201ENST00000374213 PEG3Q9GZU2 1588 aa12.6□□□□□ -0.39
CD52-201ENST00000374213 ATAD2BQ9ULI0 1458 aa12.59□□□□□ -0.39
CD52-201ENST00000374213 NCAPD3P42695 1498 aa12.59□□□□□ -0.39
CD52-201ENST00000374213 MROH2BQ7Z745 1585 aa12.52□□□□□ -0.41
CD52-201ENST00000374213 BAZ1BQ9UIG0 1483 aaKnown RBP12.51□□□□□ -0.41
CD52-201ENST00000374213 KIF21AQ7Z4S6 1674 aa12.48□□□□□ -0.41
CD52-201ENST00000374213 WIZO95785 1651 aa12.47□□□□□ -0.41
CD52-201ENST00000374213 NESP48681 1621 aa12.43□□□□□ -0.42
CD52-201ENST00000374213 THOC2Q8NI27 1593 aaKnown RBP12.43□□□□□ -0.42
CD52-201ENST00000374213 LAMC3Q9Y6N6 1575 aa12.42□□□□□ -0.42
CD52-201ENST00000374213 ERCC6Q03468 1493 aa12.4□□□□□ -0.42
CD52-201ENST00000374213 CUX2O14529 1486 aa12.39□□□□□ -0.43
CD52-201ENST00000374213 PRDM2Q13029 1718 aa12.37□□□□□ -0.43
CD52-201ENST00000374213 TOP2AP11388 1531 aaKnown RBP12.27□□□□□ -0.45
CD52-201ENST00000374213 RSF1Q96T23 1441 aaPredicted RBP12.22□□□□□ -0.45
CD52-201ENST00000374213 PDS5BQ9NTI5 1447 aa12.2□□□□□ -0.46
CD52-201ENST00000374213 WDR62O43379 1518 aa12.19□□□□□ -0.46
CD52-201ENST00000374213 CADPSQ9ULU8 1353 aa12.18□□□□□ -0.46
CD52-201ENST00000374213 MRC2Q9UBG0 1479 aa12.16□□□□□ -0.46
CD52-201ENST00000374213 CEP164Q9UPV0 1460 aa12.14□□□□□ -0.47
CD52-201ENST00000374213 CFTRP13569 1480 aa12.12□□□□□ -0.47
CD52-201ENST00000374213 FANCD2Q9BXW9 1451 aa12.11□□□□□ -0.47
CD52-201ENST00000374213 DNAJC5Q9H3Z4 198 aa12.11□□□□□ -0.47
CD52-201ENST00000374213 URB2Q14146 1524 aaKnown RBP12.04□□□□□ -0.48
CD52-201ENST00000374213 CCDC88BA6NC98 1476 aa12.03□□□□□ -0.48
CD52-201ENST00000374213 DNMBPQ6XZF7 1577 aa11.94□□□□□ -0.5
CD52-201ENST00000374213 EIF4G3O43432 1585 aaKnown RBP11.92□□□□□ -0.5
CD52-201ENST00000374213 TOPBP1Q92547 1522 aa11.92□□□□□ -0.5
CD52-201ENST00000374213 CHD1O14646 1710 aa11.91□□□□□ -0.5
CD52-201ENST00000374213 TARBP1Q13395 1621 aaKnown RBP11.89□□□□□ -0.51
CD52-201ENST00000374213 WDR97A6NE52 1622 aa11.87□□□□□ -0.51
CD52-201ENST00000374213 SENP3Q9H4L4 574 aaPredicted RBP11.86□□□□□ -0.51
CD52-201ENST00000374213 IFT140Q96RY7 1462 aa11.86□□□□□ -0.51
CD52-201ENST00000374213 ABCC8Q09428 1581 aa11.86□□□□□ -0.51
CD52-201ENST00000374213 ZNF608Q9ULD9 1512 aaPredicted RBP11.85□□□□□ -0.51
CD52-201ENST00000374213 PBRM1Q86U86 1689 aa11.82□□□□□ -0.52
CD52-201ENST00000374213 POLA1P09884 1462 aaPredicted RBP11.8□□□□□ -0.52
CD52-201ENST00000374213 RIMBP3CA6NJZ7 1639 aa11.78□□□□□ -0.52
CD52-201ENST00000374213 RIMBP3BA6NNM3 1639 aa11.78□□□□□ -0.52
CD52-201ENST00000374213 RIMBP3Q9UFD9 1639 aa11.78□□□□□ -0.52
CD52-201ENST00000374213 CUX1P39880 1505 aa11.77□□□□□ -0.52
CD52-201ENST00000374213 FGD5Q6ZNL6 1462 aa11.75□□□□□ -0.53
CD52-201ENST00000374213 BIVM-ERCC5R4GMW8 1640 aa11.73□□□□□ -0.53
CD52-201ENST00000374213 RAD54L2Q9Y4B4 1467 aa11.72□□□□□ -0.53
CD52-201ENST00000374213 ABCA5Q8WWZ7 1642 aa11.71□□□□□ -0.54
CD52-201ENST00000374213 PHF23Q9BUL5 403 aaPredicted RBP11.7□□□□□ -0.54
CD52-201ENST00000374213 AQRO60306 1485 aaKnown RBP eCLIP11.7□□□□□ -0.54
CD52-201ENST00000374213 ARHGEF11O15085 1522 aa11.67□□□□□ -0.54
CD52-201ENST00000374213 OSCARQ8IYS5 282 aa11.66□□□□□ -0.54
CD52-201ENST00000374213 SYNJ1O43426 1573 aa11.66□□□□□ -0.54
CD52-201ENST00000374213 SNAPC4Q5SXM2 1469 aa11.65□□□□□ -0.54
CD52-201ENST00000374213 TOP2BQ02880 1626 aa11.65□□□□□ -0.54
CD52-201ENST00000374213 SOGA1O94964 1423 aa11.65□□□□□ -0.54
CD52-201ENST00000374213 CLASP1Q7Z460 1538 aa11.64□□□□□ -0.55
CD52-201ENST00000374213 SUPT5HO00267 1087 aaKnown RBP11.63□□□□□ -0.55
CD52-201ENST00000374213 TRIM41Q8WV44 630 aa11.63□□□□□ -0.55
CD52-201ENST00000374213 MAGI1Q96QZ7 1491 aaPredicted RBP11.63□□□□□ -0.55
CD52-201ENST00000374213 ABCA10Q8WWZ4 1543 aa11.61□□□□□ -0.55
CD52-201ENST00000374213 ADAMTS12P58397 1594 aa11.6□□□□□ -0.55
CD52-201ENST00000374213 TDRD9Q8NDG6 1382 aaKnown RBP11.6□□□□□ -0.55
CD52-201ENST00000374213 GRIN2BQ13224 1484 aa11.59□□□□□ -0.55
CD52-201ENST00000374213 GAPVD1Q14C86 1478 aa11.57□□□□□ -0.56
CD52-201ENST00000374213 SYNJ2O15056 1496 aa11.57□□□□□ -0.56
CD52-201ENST00000374213 ARAP1Q96P48 1450 aa11.56□□□□□ -0.56
CD52-201ENST00000374213 WRNQ14191 1432 aaPredicted RBP eCLIP11.53□□□□□ -0.56
CD52-201ENST00000374213 CEP170Q5SW79 1584 aa11.51□□□□□ -0.57
CD52-201ENST00000374213 FBLN2P98095 1184 aa11.5□□□□□ -0.57
CD52-201ENST00000374213 SHROOM2Q13796 1616 aa11.49□□□□□ -0.57
CD52-201ENST00000374213 GRIN2AQ12879 1464 aa11.49□□□□□ -0.57
CD52-201ENST00000374213 ERICH3Q5RHP9 1530 aa11.49□□□□□ -0.57
CD52-201ENST00000374213 ERCC6L2Q5T890 1561 aa11.45□□□□□ -0.58
CD52-201ENST00000374213 RUSC2Q8N2Y8 1516 aa11.45□□□□□ -0.58
CD52-201ENST00000374213 CUL7Q14999 1698 aa11.44□□□□□ -0.58
CD52-201ENST00000374213 CHMP7Q8WUX9 453 aaPredicted RBP11.44□□□□□ -0.58
CD52-201ENST00000374213 NUP160Q12769 1436 aa11.43□□□□□ -0.58
CD52-201ENST00000374213 KIF13AQ9H1H9 1805 aa11.4□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms