RNA–Protein interactions for RNA: ENST00000374077.7

ROMO1-203, Transcript of reactive oxygen species modulator 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ROMO1, Length 422 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ROMO1-203ENST00000374077 NISCHQ9Y2I1 1504 aa42.95■■■■■ 4.47
ROMO1-203ENST00000374077 ABCC9O60706 1549 aa38.25■■■■□ 3.71
ROMO1-203ENST00000374077 CCDC180Q9P1Z9 1646 aa38.16■■■■□ 3.7
ROMO1-203ENST00000374077 DNAJC5BQ9UF47 199 aa36.39■■■■□ 3.42
ROMO1-203ENST00000374077 RB1CC1Q8TDY2 1594 aa36.29■■■■□ 3.4
ROMO1-203ENST00000374077 NACADO15069 1562 aa35.93■■■■□ 3.34
ROMO1-203ENST00000374077 ZCCHC6Q5VYS8 1495 aaKnown RBP35.84■■■■□ 3.33
ROMO1-203ENST00000374077 DCAF8L2P0C7V8 631 aa35.65■■■■□ 3.3
ROMO1-203ENST00000374077 MYO15BQ96JP2 1530 aa35.63■■■■□ 3.29
ROMO1-203ENST00000374077 DCAF1Q9Y4B6 1507 aa35.53■■■■□ 3.28
ROMO1-203ENST00000374077 UNC13AQ9UPW8 1703 aa35.43■■■■□ 3.26
ROMO1-203ENST00000374077 PABPN1Q86U42 306 aaKnown RBP eCLIP35.39■■■■□ 3.26
ROMO1-203ENST00000374077 BICRAQ9NZM4 1560 aa35.25■■■■□ 3.23
ROMO1-203ENST00000374077 SHROOM4Q9ULL8 1493 aa34.91■■■■□ 3.18
ROMO1-203ENST00000374077 SCRIBQ14160 1630 aa34.84■■■■□ 3.17
ROMO1-203ENST00000374077 CC2D2AQ9P2K1 1620 aa34.61■■■■□ 3.13
ROMO1-203ENST00000374077 CECR2Q9BXF3 1484 aa34.59■■■■□ 3.13
ROMO1-203ENST00000374077 EIF4G1Q04637 1599 aaKnown RBP34.42■■■■□ 3.1
ROMO1-203ENST00000374077 DNAJC5Q9H3Z4 198 aa33.98■■■■□ 3.03
ROMO1-203ENST00000374077 CUX2O14529 1486 aa33.42■■■□□ 2.94
ROMO1-203ENST00000374077 SMARCA4P51532 1647 aa33.34■■■□□ 2.93
ROMO1-203ENST00000374077 BAZ1AQ9NRL2 1556 aaPredicted RBP33.26■■■□□ 2.91
ROMO1-203ENST00000374077 NCAPD3P42695 1498 aa33.16■■■□□ 2.9
ROMO1-203ENST00000374077 MROH2BQ7Z745 1585 aa33.14■■■□□ 2.9
ROMO1-203ENST00000374077 ERCC6Q03468 1493 aa33.11■■■□□ 2.89
ROMO1-203ENST00000374077 ATAD2BQ9ULI0 1458 aa33.11■■■□□ 2.89
ROMO1-203ENST00000374077 SMARCA2P51531 1590 aa33.02■■■□□ 2.88
ROMO1-203ENST00000374077 PEG3Q9GZU2 1588 aa33.01■■■□□ 2.88
ROMO1-203ENST00000374077 HMGXB3Q12766 1538 aa32.92■■■□□ 2.86
ROMO1-203ENST00000374077 BAZ1BQ9UIG0 1483 aaKnown RBP32.8■■■□□ 2.84
ROMO1-203ENST00000374077 WIZO95785 1651 aa32.79■■■□□ 2.84
ROMO1-203ENST00000374077 RSF1Q96T23 1441 aaPredicted RBP32.76■■■□□ 2.83
ROMO1-203ENST00000374077 NESP48681 1621 aa32.68■■■□□ 2.82
ROMO1-203ENST00000374077 THOC2Q8NI27 1593 aaKnown RBP32.64■■■□□ 2.82
ROMO1-203ENST00000374077 LAMC3Q9Y6N6 1575 aa32.53■■■□□ 2.8
ROMO1-203ENST00000374077 TOP2AP11388 1531 aaKnown RBP32.42■■■□□ 2.78
ROMO1-203ENST00000374077 KIF21AQ7Z4S6 1674 aa32.31■■■□□ 2.76
ROMO1-203ENST00000374077 PDS5BQ9NTI5 1447 aa32.29■■■□□ 2.76
ROMO1-203ENST00000374077 MRC2Q9UBG0 1479 aa32.07■■■□□ 2.72
ROMO1-203ENST00000374077 CADPSQ9ULU8 1353 aa32.06■■■□□ 2.72
ROMO1-203ENST00000374077 WDR62O43379 1518 aa32.05■■■□□ 2.72
ROMO1-203ENST00000374077 TRIM41Q8WV44 630 aa32.03■■■□□ 2.72
ROMO1-203ENST00000374077 CCDC88BA6NC98 1476 aa32.02■■■□□ 2.72
ROMO1-203ENST00000374077 CFTRP13569 1480 aa31.93■■■□□ 2.7
ROMO1-203ENST00000374077 SUPT5HO00267 1087 aaKnown RBP31.87■■■□□ 2.69
ROMO1-203ENST00000374077 CEP164Q9UPV0 1460 aa31.79■■■□□ 2.68
ROMO1-203ENST00000374077 PRDM2Q13029 1718 aa31.75■■■□□ 2.67
ROMO1-203ENST00000374077 FANCD2Q9BXW9 1451 aa31.72■■■□□ 2.67
ROMO1-203ENST00000374077 OSCARQ8IYS5 282 aa31.61■■■□□ 2.65
ROMO1-203ENST00000374077 URB2Q14146 1524 aaKnown RBP31.47■■■□□ 2.63
ROMO1-203ENST00000374077 RIMBP3CA6NJZ7 1639 aa31.35■■■□□ 2.61
ROMO1-203ENST00000374077 RIMBP3BA6NNM3 1639 aa31.35■■■□□ 2.61
ROMO1-203ENST00000374077 RIMBP3Q9UFD9 1639 aa31.35■■■□□ 2.61
ROMO1-203ENST00000374077 TOPBP1Q92547 1522 aa31.25■■■□□ 2.59
ROMO1-203ENST00000374077 DNMBPQ6XZF7 1577 aa31.22■■■□□ 2.59
ROMO1-203ENST00000374077 IFT140Q96RY7 1462 aa31.21■■■□□ 2.59
ROMO1-203ENST00000374077 ARHGEF11O15085 1522 aa31.2■■■□□ 2.59
ROMO1-203ENST00000374077 ABCC8Q09428 1581 aa31.14■■■□□ 2.58
ROMO1-203ENST00000374077 ZNF608Q9ULD9 1512 aaPredicted RBP31.13■■■□□ 2.57
ROMO1-203ENST00000374077 CUX1P39880 1505 aa31.08■■■□□ 2.57
ROMO1-203ENST00000374077 POLA1P09884 1462 aaPredicted RBP31.01■■■□□ 2.55
ROMO1-203ENST00000374077 EIF4G3O43432 1585 aaKnown RBP31■■■□□ 2.55
ROMO1-203ENST00000374077 TARBP1Q13395 1621 aaKnown RBP30.95■■■□□ 2.55
ROMO1-203ENST00000374077 FGD5Q6ZNL6 1462 aa30.93■■■□□ 2.54
ROMO1-203ENST00000374077 RAD54L2Q9Y4B4 1467 aa30.87■■■□□ 2.53
ROMO1-203ENST00000374077 SYNJ1O43426 1573 aa30.86■■■□□ 2.53
ROMO1-203ENST00000374077 CHD1O14646 1710 aa30.85■■■□□ 2.53
ROMO1-203ENST00000374077 ARAP1Q96P48 1450 aa30.85■■■□□ 2.53
ROMO1-203ENST00000374077 BIVM-ERCC5R4GMW8 1640 aa30.84■■■□□ 2.53
ROMO1-203ENST00000374077 WRNQ14191 1432 aaPredicted RBP eCLIP30.83■■■□□ 2.53
ROMO1-203ENST00000374077 CYB5RLQ6IPT4 315 aa30.82■■■□□ 2.52
ROMO1-203ENST00000374077 TOP2BQ02880 1626 aa30.82■■■□□ 2.52
ROMO1-203ENST00000374077 SOGA1O94964 1423 aa30.79■■■□□ 2.52
ROMO1-203ENST00000374077 WDR97A6NE52 1622 aa30.76■■■□□ 2.51
ROMO1-203ENST00000374077 AQRO60306 1485 aaKnown RBP eCLIP30.72■■■□□ 2.511e-6■■■■■ 32.7
ROMO1-203ENST00000374077 TRHP20396 242 aaPredicted RBP30.65■■■□□ 2.5
ROMO1-203ENST00000374077 TDRD9Q8NDG6 1382 aaKnown RBP30.64■■■□□ 2.5
ROMO1-203ENST00000374077 ABCA10Q8WWZ4 1543 aa30.63■■■□□ 2.49
ROMO1-203ENST00000374077 CLASP1Q7Z460 1538 aa30.57■■■□□ 2.49
ROMO1-203ENST00000374077 ABCA5Q8WWZ7 1642 aa30.56■■■□□ 2.48
ROMO1-203ENST00000374077 FBLN2P98095 1184 aa30.52■■■□□ 2.48
ROMO1-203ENST00000374077 PBRM1Q86U86 1689 aa30.47■■■□□ 2.47
ROMO1-203ENST00000374077 GAPVD1Q14C86 1478 aa30.46■■■□□ 2.47
ROMO1-203ENST00000374077 SNAPC4Q5SXM2 1469 aa30.46■■■□□ 2.47
ROMO1-203ENST00000374077 MAGI1Q96QZ7 1491 aaPredicted RBP30.45■■■□□ 2.47
ROMO1-203ENST00000374077 GRIN2BQ13224 1484 aa30.44■■■□□ 2.46
ROMO1-203ENST00000374077 SYNJ2O15056 1496 aa30.32■■■□□ 2.44
ROMO1-203ENST00000374077 CHMP7Q8WUX9 453 aaPredicted RBP30.29■■■□□ 2.44
ROMO1-203ENST00000374077 ADAMTS12P58397 1594 aa30.25■■■□□ 2.43
ROMO1-203ENST00000374077 ERICH3Q5RHP9 1530 aa30.24■■■□□ 2.43
ROMO1-203ENST00000374077 AEBP2Q6ZN18 517 aaPredicted RBP30.24■■■□□ 2.43
ROMO1-203ENST00000374077 KIF27Q86VH2 1401 aa30.14■■■□□ 2.42
ROMO1-203ENST00000374077 FHAD1B1AJZ9 1412 aa30.11■■■□□ 2.41
ROMO1-203ENST00000374077 GRIN2AQ12879 1464 aa30.09■■■□□ 2.41
ROMO1-203ENST00000374077 IGF1RP08069 1367 aa30.05■■■□□ 2.4
ROMO1-203ENST00000374077 RUSC2Q8N2Y8 1516 aa30.03■■■□□ 2.4
ROMO1-203ENST00000374077 CEP170Q5SW79 1584 aa29.99■■■□□ 2.39
ROMO1-203ENST00000374077 CUL7Q14999 1698 aa29.99■■■□□ 2.39
ROMO1-203ENST00000374077 NUP160Q12769 1436 aa29.97■■■□□ 2.39
ROMO1-203ENST00000374077 ERCC6L2Q5T890 1561 aa29.92■■■□□ 2.38
Retrieved 100 of 20,778 RNA–protein pairs in 149.8 ms