RNA–Protein interactions for RNA: ENST00000373570.8

RPL35-202, Transcript of ribosomal protein L35, humanhuman

TSL 3 BASIC

Gene RPL35, Length 493 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPL35-202ENST00000373570 NISCHQ9Y2I1 1504 aa23.48■■□□□ 1.35
RPL35-202ENST00000373570 ABCC9O60706 1549 aa21.34■■□□□ 1.01
RPL35-202ENST00000373570 CCDC180Q9P1Z9 1646 aa21.32■■□□□ 1
RPL35-202ENST00000373570 RB1CC1Q8TDY2 1594 aa20.29■□□□□ 0.84
RPL35-202ENST00000373570 DNAJC5BQ9UF47 199 aa20.19■□□□□ 0.82
RPL35-202ENST00000373570 UNC13AQ9UPW8 1703 aa20.1■□□□□ 0.81
RPL35-202ENST00000373570 NACADO15069 1562 aa20.09■□□□□ 0.81
RPL35-202ENST00000373570 BICRAQ9NZM4 1560 aa19.77■□□□□ 0.76
RPL35-202ENST00000373570 MYO15BQ96JP2 1530 aa19.75■□□□□ 0.75
RPL35-202ENST00000373570 PABPN1Q86U42 306 aaKnown RBP eCLIP19.74■□□□□ 0.75
RPL35-202ENST00000373570 DCAF8L2P0C7V8 631 aa19.7■□□□□ 0.74
RPL35-202ENST00000373570 ZCCHC6Q5VYS8 1495 aaKnown RBP19.42■□□□□ 0.7
RPL35-202ENST00000373570 DCAF1Q9Y4B6 1507 aa19.41■□□□□ 0.7
RPL35-202ENST00000373570 SHROOM4Q9ULL8 1493 aa19.41■□□□□ 0.7
RPL35-202ENST00000373570 CC2D2AQ9P2K1 1620 aa19.37■□□□□ 0.69
RPL35-202ENST00000373570 SCRIBQ14160 1630 aa19.3■□□□□ 0.68
RPL35-202ENST00000373570 EIF4G1Q04637 1599 aaKnown RBP19.24■□□□□ 0.67
RPL35-202ENST00000373570 CECR2Q9BXF3 1484 aa19.23■□□□□ 0.67
RPL35-202ENST00000373570 DNAJC5Q9H3Z4 198 aa18.67■□□□□ 0.58
RPL35-202ENST00000373570 CUX2O14529 1486 aa18.51■□□□□ 0.55
RPL35-202ENST00000373570 NCAPD3P42695 1498 aa18.49■□□□□ 0.55
RPL35-202ENST00000373570 SMARCA4P51532 1647 aa18.43■□□□□ 0.54
RPL35-202ENST00000373570 ATAD2BQ9ULI0 1458 aa18.41■□□□□ 0.54
RPL35-202ENST00000373570 HMGXB3Q12766 1538 aa18.4■□□□□ 0.54
RPL35-202ENST00000373570 ERCC6Q03468 1493 aa18.39■□□□□ 0.54
RPL35-202ENST00000373570 SMARCA2P51531 1590 aa18.38■□□□□ 0.53
RPL35-202ENST00000373570 NESP48681 1621 aa18.3■□□□□ 0.52
RPL35-202ENST00000373570 THOC2Q8NI27 1593 aaKnown RBP18.27■□□□□ 0.52
RPL35-202ENST00000373570 PEG3Q9GZU2 1588 aa18.25■□□□□ 0.51
RPL35-202ENST00000373570 BAZ1AQ9NRL2 1556 aaPredicted RBP18.25■□□□□ 0.51
RPL35-202ENST00000373570 KIF21AQ7Z4S6 1674 aa18.22■□□□□ 0.51
RPL35-202ENST00000373570 BAZ1BQ9UIG0 1483 aaKnown RBP18.2■□□□□ 0.5
RPL35-202ENST00000373570 LAMC3Q9Y6N6 1575 aa18.19■□□□□ 0.5
RPL35-202ENST00000373570 MROH2BQ7Z745 1585 aa18.09■□□□□ 0.49
RPL35-202ENST00000373570 PDS5BQ9NTI5 1447 aa17.97■□□□□ 0.47
RPL35-202ENST00000373570 WIZO95785 1651 aa17.95■□□□□ 0.46
RPL35-202ENST00000373570 WDR62O43379 1518 aa17.9■□□□□ 0.46
RPL35-202ENST00000373570 CADPSQ9ULU8 1353 aa17.88■□□□□ 0.45
RPL35-202ENST00000373570 MRC2Q9UBG0 1479 aa17.88■□□□□ 0.45
RPL35-202ENST00000373570 PRDM2Q13029 1718 aa17.78■□□□□ 0.44
RPL35-202ENST00000373570 CEP164Q9UPV0 1460 aa17.75■□□□□ 0.43
RPL35-202ENST00000373570 FANCD2Q9BXW9 1451 aa17.71■□□□□ 0.43
RPL35-202ENST00000373570 TRIM41Q8WV44 630 aa17.7■□□□□ 0.42
RPL35-202ENST00000373570 CFTRP13569 1480 aa17.68■□□□□ 0.42
RPL35-202ENST00000373570 TOP2AP11388 1531 aaKnown RBP17.64■□□□□ 0.41
RPL35-202ENST00000373570 URB2Q14146 1524 aaKnown RBP17.62■□□□□ 0.41
RPL35-202ENST00000373570 RSF1Q96T23 1441 aaPredicted RBP17.57■□□□□ 0.4
RPL35-202ENST00000373570 OSCARQ8IYS5 282 aa17.52■□□□□ 0.4
RPL35-202ENST00000373570 RIMBP3CA6NJZ7 1639 aa17.51■□□□□ 0.39
RPL35-202ENST00000373570 RIMBP3BA6NNM3 1639 aa17.51■□□□□ 0.39
RPL35-202ENST00000373570 RIMBP3Q9UFD9 1639 aa17.51■□□□□ 0.39
RPL35-202ENST00000373570 ZNF608Q9ULD9 1512 aaPredicted RBP17.42■□□□□ 0.38
RPL35-202ENST00000373570 CHD1O14646 1710 aa17.41■□□□□ 0.38
RPL35-202ENST00000373570 IFT140Q96RY7 1462 aa17.4■□□□□ 0.38
RPL35-202ENST00000373570 EIF4G3O43432 1585 aaKnown RBP17.4■□□□□ 0.38
RPL35-202ENST00000373570 CCDC88BA6NC98 1476 aa17.39■□□□□ 0.37
RPL35-202ENST00000373570 TOPBP1Q92547 1522 aa17.38■□□□□ 0.37
RPL35-202ENST00000373570 ARHGEF11O15085 1522 aa17.36■□□□□ 0.37
RPL35-202ENST00000373570 TARBP1Q13395 1621 aaKnown RBP17.33■□□□□ 0.37
RPL35-202ENST00000373570 DNMBPQ6XZF7 1577 aa17.33■□□□□ 0.37
RPL35-202ENST00000373570 ABCC8Q09428 1581 aa17.31■□□□□ 0.36
RPL35-202ENST00000373570 AQRO60306 1485 aaKnown RBP eCLIP17.18■□□□□ 0.341e-11■■■■■ 75.8
RPL35-202ENST00000373570 POLA1P09884 1462 aaPredicted RBP17.18■□□□□ 0.34
RPL35-202ENST00000373570 ARAP1Q96P48 1450 aa17.17■□□□□ 0.34
RPL35-202ENST00000373570 WDR97A6NE52 1622 aa17.14■□□□□ 0.33
RPL35-202ENST00000373570 CYB5RLQ6IPT4 315 aa17.11■□□□□ 0.33
RPL35-202ENST00000373570 RAD54L2Q9Y4B4 1467 aa17.1■□□□□ 0.33
RPL35-202ENST00000373570 CLASP1Q7Z460 1538 aa17.09■□□□□ 0.33
RPL35-202ENST00000373570 PBRM1Q86U86 1689 aa17.07■□□□□ 0.32
RPL35-202ENST00000373570 SNAPC4Q5SXM2 1469 aa17.04■□□□□ 0.32
RPL35-202ENST00000373570 FGD5Q6ZNL6 1462 aa17.04■□□□□ 0.32
RPL35-202ENST00000373570 SOGA1O94964 1423 aa17.04■□□□□ 0.32
RPL35-202ENST00000373570 SYNJ1O43426 1573 aa17.02■□□□□ 0.32
RPL35-202ENST00000373570 CUX1P39880 1505 aa17.02■□□□□ 0.32
RPL35-202ENST00000373570 FBLN2P98095 1184 aa17.02■□□□□ 0.32
RPL35-202ENST00000373570 TDRD9Q8NDG6 1382 aaKnown RBP17.02■□□□□ 0.31
RPL35-202ENST00000373570 MAGI1Q96QZ7 1491 aaPredicted RBP16.99■□□□□ 0.31
RPL35-202ENST00000373570 TRHP20396 242 aaPredicted RBP16.96■□□□□ 0.31
RPL35-202ENST00000373570 GRIN2BQ13224 1484 aa16.94■□□□□ 0.3
RPL35-202ENST00000373570 ABCA5Q8WWZ7 1642 aa16.93■□□□□ 0.3
RPL35-202ENST00000373570 SYNJ2O15056 1496 aa16.93■□□□□ 0.3
RPL35-202ENST00000373570 CHMP7Q8WUX9 453 aaPredicted RBP16.88■□□□□ 0.29
RPL35-202ENST00000373570 GAPVD1Q14C86 1478 aa16.86■□□□□ 0.29
RPL35-202ENST00000373570 ABCA10Q8WWZ4 1543 aa16.84■□□□□ 0.29
RPL35-202ENST00000373570 ERCC6L2Q5T890 1561 aa16.8■□□□□ 0.28
RPL35-202ENST00000373570 BIVM-ERCC5R4GMW8 1640 aa16.79■□□□□ 0.28
RPL35-202ENST00000373570 ADAMTS12P58397 1594 aa16.78■□□□□ 0.28
RPL35-202ENST00000373570 SHROOM2Q13796 1616 aa16.78■□□□□ 0.28
RPL35-202ENST00000373570 KIF13AQ9H1H9 1805 aa16.77■□□□□ 0.28
RPL35-202ENST00000373570 CEP170Q5SW79 1584 aa16.77■□□□□ 0.27
RPL35-202ENST00000373570 GRIN2AQ12879 1464 aa16.75■□□□□ 0.27
RPL35-202ENST00000373570 TOP2BQ02880 1626 aa16.73■□□□□ 0.27
RPL35-202ENST00000373570 NUP160Q12769 1436 aa16.7■□□□□ 0.26
RPL35-202ENST00000373570 AEBP2Q6ZN18 517 aaPredicted RBP16.68■□□□□ 0.26
RPL35-202ENST00000373570 WRNQ14191 1432 aaPredicted RBP eCLIP16.65■□□□□ 0.26
RPL35-202ENST00000373570 ERICH3Q5RHP9 1530 aa16.65■□□□□ 0.26
RPL35-202ENST00000373570 FHAD1B1AJZ9 1412 aa16.62■□□□□ 0.25
RPL35-202ENST00000373570 RUSC2Q8N2Y8 1516 aa16.57■□□□□ 0.24
RPL35-202ENST00000373570 SUPT5HO00267 1087 aaKnown RBP16.51■□□□□ 0.23
RPL35-202ENST00000373570 PRG4Q92954 1404 aaPredicted RBP16.51■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 11.8 ms