RNA–Protein interactions for RNA: ENST00000372802.5

CAP1-205, Transcript of cyclase associated actin cytoskeleton regulatory protein 1, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene CAP1, Length 2,964 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAP1-205ENST00000372802 NISCHQ9Y2I1 1504 aa29.97■■■□□ 2.39
CAP1-205ENST00000372802 SHROOM4Q9ULL8 1493 aa26.8■■□□□ 1.88
CAP1-205ENST00000372802 SUPT5HO00267 1087 aaKnown RBP26.66■■□□□ 1.86
CAP1-205ENST00000372802 HRCP23327 699 aa26.55■■□□□ 1.84
CAP1-205ENST00000372802 PCGF6Q9BYE7 350 aa26.26■■□□□ 1.79
CAP1-205ENST00000372802 PPARGC1BQ86YN6 1023 aaKnown RBP26.22■■□□□ 1.79
CAP1-205ENST00000372802 MYO15BQ96JP2 1530 aa26.13■■□□□ 1.77
CAP1-205ENST00000372802 CHIC1Q5VXU3 224 aa26.01■■□□□ 1.75
CAP1-205ENST00000372802 LOC105371045A0A1W2PR82 267 aa25.55■■□□□ 1.68
CAP1-205ENST00000372802 ZCCHC6Q5VYS8 1495 aaKnown RBP25.44■■□□□ 1.66
CAP1-205ENST00000372802 DCAF8L2P0C7V8 631 aa25.44■■□□□ 1.66
CAP1-205ENST00000372802 DCAF1Q9Y4B6 1507 aa25.37■■□□□ 1.65
CAP1-205ENST00000372802 TRIM26Q12899 539 aaPredicted RBP25.29■■□□□ 1.64
CAP1-205ENST00000372802 PELP1Q8IZL8 1130 aaKnown RBP25.24■■□□□ 1.63
CAP1-205ENST00000372802 SCAF1Q9H7N4 1312 aaKnown RBP25.11■■□□□ 1.61
CAP1-205ENST00000372802 CCDC180Q9P1Z9 1646 aa25.01■■□□□ 1.59
CAP1-205ENST00000372802 ZEB1P37275 1124 aaPredicted RBP24.96■■□□□ 1.59
CAP1-205ENST00000372802 EHMT2Q96KQ7 1210 aa24.74■■□□□ 1.55
CAP1-205ENST00000372802 FAM9AQ8IZU1 332 aaPredicted RBP24.71■■□□□ 1.55
CAP1-205ENST00000372802 TRIM41Q8WV44 630 aa24.57■■□□□ 1.52
CAP1-205ENST00000372802 NEUROD1Q13562 356 aa24.51■■□□□ 1.51
CAP1-205ENST00000372802 ACIN1Q9UKV3 1341 aaKnown RBP24.5■■□□□ 1.51
CAP1-205ENST00000372802 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP24.4■■□□□ 1.5
CAP1-205ENST00000372802 GTF3C3Q9Y5Q9 886 aa24.38■■□□□ 1.49
CAP1-205ENST00000372802 CCER1Q8TC90 406 aaPredicted RBP24.31■■□□□ 1.48
CAP1-205ENST00000372802 DIEXFQ68CQ4 756 aaKnown RBP24.22■■□□□ 1.47
CAP1-205ENST00000372802 CENPBP07199 599 aaPredicted RBP24.2■■□□□ 1.46
CAP1-205ENST00000372802 RSF1Q96T23 1441 aaPredicted RBP24.15■■□□□ 1.46
CAP1-205ENST00000372802 MYT1Q01538 1121 aa24.14■■□□□ 1.46
CAP1-205ENST00000372802 ABCC9O60706 1549 aa24.14■■□□□ 1.45
CAP1-205ENST00000372802 TTBK1Q5TCY1 1321 aaPredicted RBP24.09■■□□□ 1.45
CAP1-205ENST00000372802 RB1CC1Q8TDY2 1594 aa24.06■■□□□ 1.44
CAP1-205ENST00000372802 YTHDC1Q96MU7 727 aaKnown RBP23.97■■□□□ 1.43
CAP1-205ENST00000372802 SCRIBQ14160 1630 aa23.89■■□□□ 1.42
CAP1-205ENST00000372802 ZNF316A6NFI3 1004 aaPredicted RBP23.74■■□□□ 1.39
CAP1-205ENST00000372802 MIER1Q8N108 512 aa23.64■■□□□ 1.38
CAP1-205ENST00000372802 CECR2Q9BXF3 1484 aa23.58■■□□□ 1.37
CAP1-205ENST00000372802 MROH2BQ7Z745 1585 aa23.49■■□□□ 1.35
CAP1-205ENST00000372802 CEP162Q5TB80 1403 aa23.44■■□□□ 1.34
CAP1-205ENST00000372802 WIZO95785 1651 aa23.43■■□□□ 1.34
CAP1-205ENST00000372802 HNRNPUL2Q1KMD3 747 aaKnown RBP23.43■■□□□ 1.34
CAP1-205ENST00000372802 WRNQ14191 1432 aaPredicted RBP eCLIP23.4■■□□□ 1.342e-8■■■□□ 16.7
CAP1-205ENST00000372802 UBTFP17480 764 aaKnown RBP23.38■■□□□ 1.33
CAP1-205ENST00000372802 CCDC88BA6NC98 1476 aa23.32■■□□□ 1.32
CAP1-205ENST00000372802 ABCC8Q09428 1581 aa23.31■■□□□ 1.32
CAP1-205ENST00000372802 SOGA1O94964 1423 aa23.27■■□□□ 1.32
CAP1-205ENST00000372802 TNIKQ9UKE5 1360 aa23.23■■□□□ 1.31
CAP1-205ENST00000372802 CSRNP3Q8WYN3 585 aa23.18■■□□□ 1.3
CAP1-205ENST00000372802 SUPT16HQ9Y5B9 1047 aaKnown RBP23.18■■□□□ 1.3
CAP1-205ENST00000372802 EIF4G1Q04637 1599 aaKnown RBP23.17■■□□□ 1.3
CAP1-205ENST00000372802 RUSC2Q8N2Y8 1516 aa23.14■■□□□ 1.3
CAP1-205ENST00000372802 BAZ1AQ9NRL2 1556 aaPredicted RBP23.11■■□□□ 1.29
CAP1-205ENST00000372802 RANGAP1P46060 587 aaPredicted RBP23.05■■□□□ 1.28
CAP1-205ENST00000372802 TSHZ2Q9NRE2 1034 aa23.04■■□□□ 1.28
CAP1-205ENST00000372802 ANP32EQ9BTT0 268 aa22.98■■□□□ 1.27
CAP1-205ENST00000372802 APLP2Q06481 763 aa22.96■■□□□ 1.27
CAP1-205ENST00000372802 GOLGA3Q08378 1498 aa22.95■■□□□ 1.27
CAP1-205ENST00000372802 CLSPNQ9HAW4 1339 aa22.9■■□□□ 1.26
CAP1-205ENST00000372802 EEA1Q15075 1411 aa22.9■■□□□ 1.26
CAP1-205ENST00000372802 NACADO15069 1562 aa22.89■■□□□ 1.26
CAP1-205ENST00000372802 BCANQ96GW7 911 aa22.89■■□□□ 1.25
CAP1-205ENST00000372802 BCL11AQ9H165 835 aa22.86■■□□□ 1.25
CAP1-205ENST00000372802 TOP2AP11388 1531 aaKnown RBP22.85■■□□□ 1.25
CAP1-205ENST00000372802 CLIP1P30622 1438 aa22.84■■□□□ 1.25
CAP1-205ENST00000372802 SMARCA2P51531 1590 aa22.83■■□□□ 1.25
CAP1-205ENST00000372802 KCNH8Q96L42 1107 aa22.81■■□□□ 1.24
CAP1-205ENST00000372802 DHX57Q6P158 1386 aaKnown RBP22.75■■□□□ 1.23
CAP1-205ENST00000372802 VPS8Q8N3P4 1428 aa22.75■■□□□ 1.23
CAP1-205ENST00000372802 CEP164Q9UPV0 1460 aa22.71■■□□□ 1.23
CAP1-205ENST00000372802 FKBP8Q14318 412 aa22.68■■□□□ 1.22
CAP1-205ENST00000372802 SMARCA4P51532 1647 aa22.65■■□□□ 1.22
CAP1-205ENST00000372802 ITGAEP38570 1179 aa22.6■■□□□ 1.21
CAP1-205ENST00000372802 RAPGEF2Q9Y4G8 1499 aa22.59■■□□□ 1.21
CAP1-205ENST00000372802 KANK4Q5T7N3 995 aaPredicted RBP22.57■■□□□ 1.2
CAP1-205ENST00000372802 KIF21BO75037 1637 aa22.56■■□□□ 1.2
CAP1-205ENST00000372802 RBM19Q9Y4C8 960 aaKnown RBP22.53■■□□□ 1.2
CAP1-205ENST00000372802 SYNJ1O43426 1573 aa22.52■■□□□ 1.2
CAP1-205ENST00000372802 DDX10Q13206 875 aaKnown RBP22.5■■□□□ 1.19
CAP1-205ENST00000372802 NEFLP07196 543 aa22.45■■□□□ 1.18
CAP1-205ENST00000372802 TRIM52Q96A61 297 aa22.44■■□□□ 1.18
CAP1-205ENST00000372802 BAZ1BQ9UIG0 1483 aaKnown RBP22.43■■□□□ 1.18
CAP1-205ENST00000372802 HIRIP3Q9BW71 556 aaPredicted RBP22.39■■□□□ 1.17
CAP1-205ENST00000372802 PABPN1Q86U42 306 aaKnown RBP eCLIP22.35■■□□□ 1.17
CAP1-205ENST00000372802 MSH5O43196 834 aa22.31■■□□□ 1.16
CAP1-205ENST00000372802 SIN3AQ96ST3 1273 aa22.3■■□□□ 1.16
CAP1-205ENST00000372802 ARAP1Q96P48 1450 aa22.3■■□□□ 1.16
CAP1-205ENST00000372802 CCNB3Q8WWL7 1395 aa22.28■■□□□ 1.16
CAP1-205ENST00000372802 RRBP1Q9P2E9 1410 aaKnown RBP22.27■■□□□ 1.16
CAP1-205ENST00000372802 RAB3GAP2Q9H2M9 1393 aa22.26■■□□□ 1.15
CAP1-205ENST00000372802 IRX6P78412 446 aaPredicted RBP22.2■■□□□ 1.15
CAP1-205ENST00000372802 PPP1R15AO75807 674 aaPredicted RBP22.2■■□□□ 1.14
CAP1-205ENST00000372802 ANP32CO43423 234 aa22.19■■□□□ 1.14
CAP1-205ENST00000372802 WDR97A6NE52 1622 aa22.19■■□□□ 1.14
CAP1-205ENST00000372802 MAPKBP1O60336 1514 aa22.18■■□□□ 1.14
CAP1-205ENST00000372802 ERICH6Q7L0X2 663 aa22.17■■□□□ 1.14
CAP1-205ENST00000372802 CUX2O14529 1486 aa22.16■■□□□ 1.14
CAP1-205ENST00000372802 UNC13AQ9UPW8 1703 aa22.16■■□□□ 1.14
CAP1-205ENST00000372802 FAM50AQ14320 339 aaKnown RBP22.11■■□□□ 1.13
CAP1-205ENST00000372802 CCER2I3L3R5 266 aa22.09■■□□□ 1.13
CAP1-205ENST00000372802 PRXQ9BXM0 1461 aa22.08■■□□□ 1.13
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms