RNA–Protein interactions for RNA: ENST00000372779.9

PPT1-202, Transcript of palmitoyl-protein thioesterase 1, humanhuman

TSL 5

Gene PPT1, Length 588 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPT1-202ENST00000372779 NISCHQ9Y2I1 1504 aa35.41■■■■□ 3.26
PPT1-202ENST00000372779 CCDC180Q9P1Z9 1646 aa31.42■■■□□ 2.62
PPT1-202ENST00000372779 ABCC9O60706 1549 aa30.7■■■□□ 2.51
PPT1-202ENST00000372779 DCAF8L2P0C7V8 631 aa29.56■■■□□ 2.32
PPT1-202ENST00000372779 RB1CC1Q8TDY2 1594 aa29.56■■■□□ 2.32
PPT1-202ENST00000372779 NACADO15069 1562 aa29.55■■■□□ 2.32
PPT1-202ENST00000372779 ZCCHC6Q5VYS8 1495 aaKnown RBP29.52■■■□□ 2.32
PPT1-202ENST00000372779 MYO15BQ96JP2 1530 aa29.41■■■□□ 2.3
PPT1-202ENST00000372779 DCAF1Q9Y4B6 1507 aa29.31■■■□□ 2.28
PPT1-202ENST00000372779 UNC13AQ9UPW8 1703 aa28.78■■■□□ 2.2
PPT1-202ENST00000372779 PABPN1Q86U42 306 aaKnown RBP eCLIP28.71■■■□□ 2.19
PPT1-202ENST00000372779 SCRIBQ14160 1630 aa28.69■■■□□ 2.18
PPT1-202ENST00000372779 BICRAQ9NZM4 1560 aa28.63■■■□□ 2.17
PPT1-202ENST00000372779 SHROOM4Q9ULL8 1493 aa28.4■■■□□ 2.14
PPT1-202ENST00000372779 DNAJC5BQ9UF47 199 aa28.09■■■□□ 2.09
PPT1-202ENST00000372779 EIF4G1Q04637 1599 aaKnown RBP27.89■■■□□ 2.05
PPT1-202ENST00000372779 CC2D2AQ9P2K1 1620 aa27.74■■■□□ 2.03
PPT1-202ENST00000372779 CECR2Q9BXF3 1484 aa27.58■■■□□ 2.01
PPT1-202ENST00000372779 BAZ1AQ9NRL2 1556 aaPredicted RBP27.44■■□□□ 1.98
PPT1-202ENST00000372779 SMARCA4P51532 1647 aa27.44■■□□□ 1.98
PPT1-202ENST00000372779 ATAD2BQ9ULI0 1458 aa27.3■■□□□ 1.96
PPT1-202ENST00000372779 MROH2BQ7Z745 1585 aa27.28■■□□□ 1.96
PPT1-202ENST00000372779 SMARCA2P51531 1590 aa27.27■■□□□ 1.96
PPT1-202ENST00000372779 NCAPD3P42695 1498 aa27.27■■□□□ 1.96
PPT1-202ENST00000372779 PEG3Q9GZU2 1588 aa27.18■■□□□ 1.94
PPT1-202ENST00000372779 HMGXB3Q12766 1538 aa27.14■■□□□ 1.94
PPT1-202ENST00000372779 BAZ1BQ9UIG0 1483 aaKnown RBP27.08■■□□□ 1.93
PPT1-202ENST00000372779 RSF1Q96T23 1441 aaPredicted RBP27.02■■□□□ 1.92
PPT1-202ENST00000372779 WIZO95785 1651 aa26.96■■□□□ 1.91
PPT1-202ENST00000372779 TOP2AP11388 1531 aaKnown RBP26.73■■□□□ 1.87
PPT1-202ENST00000372779 NESP48681 1621 aa26.57■■□□□ 1.84
PPT1-202ENST00000372779 LAMC3Q9Y6N6 1575 aa26.52■■□□□ 1.84
PPT1-202ENST00000372779 CADPSQ9ULU8 1353 aa26.49■■□□□ 1.83
PPT1-202ENST00000372779 ERCC6Q03468 1493 aa26.48■■□□□ 1.83
PPT1-202ENST00000372779 CCDC88BA6NC98 1476 aa26.41■■□□□ 1.82
PPT1-202ENST00000372779 SUPT5HO00267 1087 aaKnown RBP26.4■■□□□ 1.82
PPT1-202ENST00000372779 PDS5BQ9NTI5 1447 aa26.38■■□□□ 1.81
PPT1-202ENST00000372779 CFTRP13569 1480 aa26.35■■□□□ 1.81
PPT1-202ENST00000372779 KIF21AQ7Z4S6 1674 aa26.22■■□□□ 1.79
PPT1-202ENST00000372779 FANCD2Q9BXW9 1451 aa26.18■■□□□ 1.78
PPT1-202ENST00000372779 CUX2O14529 1486 aa26.16■■□□□ 1.78
PPT1-202ENST00000372779 CEP164Q9UPV0 1460 aa26.15■■□□□ 1.78
PPT1-202ENST00000372779 THOC2Q8NI27 1593 aaKnown RBP26.14■■□□□ 1.78
PPT1-202ENST00000372779 MRC2Q9UBG0 1479 aa26.1■■□□□ 1.77
PPT1-202ENST00000372779 PRDM2Q13029 1718 aa26.06■■□□□ 1.76
PPT1-202ENST00000372779 WDR62O43379 1518 aa25.98■■□□□ 1.75
PPT1-202ENST00000372779 URB2Q14146 1524 aaKnown RBP25.91■■□□□ 1.74
PPT1-202ENST00000372779 ABCC8Q09428 1581 aa25.78■■□□□ 1.72
PPT1-202ENST00000372779 TOPBP1Q92547 1522 aa25.77■■□□□ 1.72
PPT1-202ENST00000372779 DNMBPQ6XZF7 1577 aa25.73■■□□□ 1.71
PPT1-202ENST00000372779 IFT140Q96RY7 1462 aa25.6■■□□□ 1.69
PPT1-202ENST00000372779 CUX1P39880 1505 aa25.59■■□□□ 1.69
PPT1-202ENST00000372779 POLA1P09884 1462 aaPredicted RBP25.56■■□□□ 1.68
PPT1-202ENST00000372779 FGD5Q6ZNL6 1462 aa25.51■■□□□ 1.67
PPT1-202ENST00000372779 WRNQ14191 1432 aaPredicted RBP eCLIP25.48■■□□□ 1.67
PPT1-202ENST00000372779 SOGA1O94964 1423 aa25.46■■□□□ 1.67
PPT1-202ENST00000372779 ZNF608Q9ULD9 1512 aaPredicted RBP25.46■■□□□ 1.67
PPT1-202ENST00000372779 TARBP1Q13395 1621 aaKnown RBP25.45■■□□□ 1.66
PPT1-202ENST00000372779 RAD54L2Q9Y4B4 1467 aa25.44■■□□□ 1.66
PPT1-202ENST00000372779 TOP2BQ02880 1626 aa25.38■■□□□ 1.65
PPT1-202ENST00000372779 SYNJ1O43426 1573 aa25.38■■□□□ 1.65
PPT1-202ENST00000372779 BIVM-ERCC5R4GMW8 1640 aa25.37■■□□□ 1.65
PPT1-202ENST00000372779 EIF4G3O43432 1585 aaKnown RBP25.35■■□□□ 1.65
PPT1-202ENST00000372779 AQRO60306 1485 aaKnown RBP eCLIP25.33■■□□□ 1.65
PPT1-202ENST00000372779 TDRD9Q8NDG6 1382 aaKnown RBP25.31■■□□□ 1.64
PPT1-202ENST00000372779 WDR97A6NE52 1622 aa25.28■■□□□ 1.64
PPT1-202ENST00000372779 ABCA10Q8WWZ4 1543 aa25.27■■□□□ 1.64
PPT1-202ENST00000372779 DNAJC5Q9H3Z4 198 aa25.26■■□□□ 1.63
PPT1-202ENST00000372779 GRIN2BQ13224 1484 aa25.16■■□□□ 1.62
PPT1-202ENST00000372779 GAPVD1Q14C86 1478 aa25.16■■□□□ 1.62
PPT1-202ENST00000372779 ABCA5Q8WWZ7 1642 aa25.14■■□□□ 1.61
PPT1-202ENST00000372779 SNAPC4Q5SXM2 1469 aa25.11■■□□□ 1.61
PPT1-202ENST00000372779 OSCARQ8IYS5 282 aa25.1■■□□□ 1.61
PPT1-202ENST00000372779 MAGI1Q96QZ7 1491 aaPredicted RBP25.09■■□□□ 1.61
PPT1-202ENST00000372779 PBRM1Q86U86 1689 aa25.04■■□□□ 1.6
PPT1-202ENST00000372779 FBLN2P98095 1184 aa25.03■■□□□ 1.6
PPT1-202ENST00000372779 SYNJ2O15056 1496 aa24.98■■□□□ 1.59
PPT1-202ENST00000372779 CHMP7Q8WUX9 453 aaPredicted RBP24.98■■□□□ 1.59
PPT1-202ENST00000372779 CHD1O14646 1710 aa24.97■■□□□ 1.59
PPT1-202ENST00000372779 ERICH3Q5RHP9 1530 aa24.96■■□□□ 1.59
PPT1-202ENST00000372779 KIF27Q86VH2 1401 aa24.95■■□□□ 1.59
PPT1-202ENST00000372779 TRIM41Q8WV44 630 aa24.94■■□□□ 1.58
PPT1-202ENST00000372779 ADAMTS12P58397 1594 aa24.89■■□□□ 1.58
PPT1-202ENST00000372779 FHAD1B1AJZ9 1412 aa24.89■■□□□ 1.58
PPT1-202ENST00000372779 IGF1RP08069 1367 aa24.83■■□□□ 1.57
PPT1-202ENST00000372779 GRIN2AQ12879 1464 aa24.83■■□□□ 1.56
PPT1-202ENST00000372779 CLASP1Q7Z460 1538 aa24.76■■□□□ 1.55
PPT1-202ENST00000372779 CUL7Q14999 1698 aa24.73■■□□□ 1.55
PPT1-202ENST00000372779 NUP160Q12769 1436 aa24.72■■□□□ 1.55
PPT1-202ENST00000372779 RUSC2Q8N2Y8 1516 aa24.71■■□□□ 1.55
PPT1-202ENST00000372779 CARMIL1Q5VZK9 1371 aa24.68■■□□□ 1.54
PPT1-202ENST00000372779 CEP170Q5SW79 1584 aa24.68■■□□□ 1.54
PPT1-202ENST00000372779 ARHGEF11O15085 1522 aa24.67■■□□□ 1.54
PPT1-202ENST00000372779 CHIC1Q5VXU3 224 aa24.67■■□□□ 1.54
PPT1-202ENST00000372779 RIMBP3CA6NJZ7 1639 aa24.64■■□□□ 1.53
PPT1-202ENST00000372779 RIMBP3BA6NNM3 1639 aa24.64■■□□□ 1.53
PPT1-202ENST00000372779 RIMBP3Q9UFD9 1639 aa24.64■■□□□ 1.53
PPT1-202ENST00000372779 RAPGEF2Q9Y4G8 1499 aa24.55■■□□□ 1.52
PPT1-202ENST00000372779 EEA1Q15075 1411 aa24.53■■□□□ 1.52
PPT1-202ENST00000372779 KIAA0586Q9BVV6 1533 aa24.51■■□□□ 1.51
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms