RNA–Protein interactions for RNA: ENST00000372122.3

GFI1B-202, Transcript of growth factor independent 1B transcriptional repressor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GFI1B, Length 1,797 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GFI1B-202ENST00000372122 NISCHQ9Y2I1 1504 aa31.45■■■□□ 2.63
GFI1B-202ENST00000372122 CCDC180Q9P1Z9 1646 aa27.54■■■□□ 2
GFI1B-202ENST00000372122 ZCCHC6Q5VYS8 1495 aaKnown RBP26.37■■□□□ 1.81
GFI1B-202ENST00000372122 ABCC9O60706 1549 aa26.23■■□□□ 1.79
GFI1B-202ENST00000372122 DCAF1Q9Y4B6 1507 aa26.01■■□□□ 1.75
GFI1B-202ENST00000372122 DCAF8L2P0C7V8 631 aa26■■□□□ 1.75
GFI1B-202ENST00000372122 MYO15BQ96JP2 1530 aa25.79■■□□□ 1.72
GFI1B-202ENST00000372122 NACADO15069 1562 aa25.7■■□□□ 1.7
GFI1B-202ENST00000372122 RB1CC1Q8TDY2 1594 aa25.53■■□□□ 1.68
GFI1B-202ENST00000372122 SHROOM4Q9ULL8 1493 aa25.46■■□□□ 1.67
GFI1B-202ENST00000372122 SCRIBQ14160 1630 aa25.27■■□□□ 1.64
GFI1B-202ENST00000372122 UNC13AQ9UPW8 1703 aa25.04■■□□□ 1.6
GFI1B-202ENST00000372122 BICRAQ9NZM4 1560 aa24.78■■□□□ 1.56
GFI1B-202ENST00000372122 PABPN1Q86U42 306 aaKnown RBP eCLIP24.68■■□□□ 1.54
GFI1B-202ENST00000372122 CECR2Q9BXF3 1484 aa24.45■■□□□ 1.5
GFI1B-202ENST00000372122 SUPT5HO00267 1087 aaKnown RBP24.37■■□□□ 1.49
GFI1B-202ENST00000372122 RSF1Q96T23 1441 aaPredicted RBP24.3■■□□□ 1.48
GFI1B-202ENST00000372122 BAZ1AQ9NRL2 1556 aaPredicted RBP24.29■■□□□ 1.48
GFI1B-202ENST00000372122 MROH2BQ7Z745 1585 aa24.29■■□□□ 1.48
GFI1B-202ENST00000372122 SMARCA4P51532 1647 aa24.23■■□□□ 1.47
GFI1B-202ENST00000372122 WIZO95785 1651 aa24.08■■□□□ 1.45
GFI1B-202ENST00000372122 EIF4G1Q04637 1599 aaKnown RBP24.04■■□□□ 1.44
GFI1B-202ENST00000372122 PEG3Q9GZU2 1588 aa23.95■■□□□ 1.42
GFI1B-202ENST00000372122 ATAD2BQ9ULI0 1458 aa23.88■■□□□ 1.41
GFI1B-202ENST00000372122 SMARCA2P51531 1590 aa23.86■■□□□ 1.41
GFI1B-202ENST00000372122 TOP2AP11388 1531 aaKnown RBP23.82■■□□□ 1.4
GFI1B-202ENST00000372122 CC2D2AQ9P2K1 1620 aa23.74■■□□□ 1.39
GFI1B-202ENST00000372122 BAZ1BQ9UIG0 1483 aaKnown RBP23.73■■□□□ 1.39
GFI1B-202ENST00000372122 NCAPD3P42695 1498 aa23.72■■□□□ 1.39
GFI1B-202ENST00000372122 HMGXB3Q12766 1538 aa23.67■■□□□ 1.38
GFI1B-202ENST00000372122 CCDC88BA6NC98 1476 aa23.57■■□□□ 1.36
GFI1B-202ENST00000372122 DNAJC5BQ9UF47 199 aa23.36■■□□□ 1.33
GFI1B-202ENST00000372122 CHIC1Q5VXU3 224 aa23.23■■□□□ 1.31
GFI1B-202ENST00000372122 CFTRP13569 1480 aa23.13■■□□□ 1.29
GFI1B-202ENST00000372122 CADPSQ9ULU8 1353 aa23.09■■□□□ 1.29
GFI1B-202ENST00000372122 PRDM2Q13029 1718 aa23.02■■□□□ 1.27
GFI1B-202ENST00000372122 ABCC8Q09428 1581 aa23■■□□□ 1.27
GFI1B-202ENST00000372122 NESP48681 1621 aa22.96■■□□□ 1.27
GFI1B-202ENST00000372122 LAMC3Q9Y6N6 1575 aa22.95■■□□□ 1.26
GFI1B-202ENST00000372122 TRIM41Q8WV44 630 aa22.94■■□□□ 1.26
GFI1B-202ENST00000372122 WRNQ14191 1432 aaPredicted RBP eCLIP22.87■■□□□ 1.25
GFI1B-202ENST00000372122 FANCD2Q9BXW9 1451 aa22.83■■□□□ 1.25
GFI1B-202ENST00000372122 SYNJ1O43426 1573 aa22.8■■□□□ 1.24
GFI1B-202ENST00000372122 PDS5BQ9NTI5 1447 aa22.76■■□□□ 1.23
GFI1B-202ENST00000372122 TOP2BQ02880 1626 aa22.73■■□□□ 1.23
GFI1B-202ENST00000372122 CUX1P39880 1505 aa22.73■■□□□ 1.23
GFI1B-202ENST00000372122 BIVM-ERCC5R4GMW8 1640 aa22.72■■□□□ 1.23
GFI1B-202ENST00000372122 CEP164Q9UPV0 1460 aa22.71■■□□□ 1.23
GFI1B-202ENST00000372122 KIF21AQ7Z4S6 1674 aa22.7■■□□□ 1.22
GFI1B-202ENST00000372122 DNMBPQ6XZF7 1577 aa22.59■■□□□ 1.21
GFI1B-202ENST00000372122 URB2Q14146 1524 aaKnown RBP22.57■■□□□ 1.2
GFI1B-202ENST00000372122 TOPBP1Q92547 1522 aa22.56■■□□□ 1.2
GFI1B-202ENST00000372122 SOGA1O94964 1423 aa22.51■■□□□ 1.19
GFI1B-202ENST00000372122 ERCC6Q03468 1493 aa22.5■■□□□ 1.19
GFI1B-202ENST00000372122 FGD5Q6ZNL6 1462 aa22.5■■□□□ 1.19
GFI1B-202ENST00000372122 FAM9AQ8IZU1 332 aaPredicted RBP22.5■■□□□ 1.19
GFI1B-202ENST00000372122 MRC2Q9UBG0 1479 aa22.49■■□□□ 1.19
GFI1B-202ENST00000372122 RUSC2Q8N2Y8 1516 aa22.45■■□□□ 1.19
GFI1B-202ENST00000372122 POLA1P09884 1462 aaPredicted RBP22.43■■□□□ 1.18
GFI1B-202ENST00000372122 EEA1Q15075 1411 aa22.42■■□□□ 1.18
GFI1B-202ENST00000372122 WDR62O43379 1518 aa22.39■■□□□ 1.18
GFI1B-202ENST00000372122 THOC2Q8NI27 1593 aaKnown RBP22.39■■□□□ 1.17
GFI1B-202ENST00000372122 RAD54L2Q9Y4B4 1467 aa22.36■■□□□ 1.17
GFI1B-202ENST00000372122 LOC105371045A0A1W2PR82 267 aa22.33■■□□□ 1.16
GFI1B-202ENST00000372122 CSRNP3Q8WYN3 585 aa22.32■■□□□ 1.16
GFI1B-202ENST00000372122 KIF27Q86VH2 1401 aa22.31■■□□□ 1.16
GFI1B-202ENST00000372122 CUX2O14529 1486 aa22.31■■□□□ 1.16
GFI1B-202ENST00000372122 ABCA10Q8WWZ4 1543 aa22.3■■□□□ 1.16
GFI1B-202ENST00000372122 WDR97A6NE52 1622 aa22.27■■□□□ 1.16
GFI1B-202ENST00000372122 TARBP1Q13395 1621 aaKnown RBP22.26■■□□□ 1.15
GFI1B-202ENST00000372122 EHMT2Q96KQ7 1210 aa22.18■■□□□ 1.14
GFI1B-202ENST00000372122 IFT140Q96RY7 1462 aa22.18■■□□□ 1.14
GFI1B-202ENST00000372122 KIF21BO75037 1637 aa22.16■■□□□ 1.14
GFI1B-202ENST00000372122 IGF1RP08069 1367 aa22.15■■□□□ 1.14
GFI1B-202ENST00000372122 TDRD9Q8NDG6 1382 aaKnown RBP22.15■■□□□ 1.14
GFI1B-202ENST00000372122 ABCA5Q8WWZ7 1642 aa22.15■■□□□ 1.14
GFI1B-202ENST00000372122 PRXQ9BXM0 1461 aa22.12■■□□□ 1.13
GFI1B-202ENST00000372122 GAPVD1Q14C86 1478 aa22.1■■□□□ 1.13
GFI1B-202ENST00000372122 GOLGA3Q08378 1498 aa22.1■■□□□ 1.13
GFI1B-202ENST00000372122 ZNF608Q9ULD9 1512 aaPredicted RBP22.08■■□□□ 1.12
GFI1B-202ENST00000372122 RAPGEF2Q9Y4G8 1499 aa22.07■■□□□ 1.12
GFI1B-202ENST00000372122 AQRO60306 1485 aaKnown RBP eCLIP22.06■■□□□ 1.123e-7■■■■■ 29.2
GFI1B-202ENST00000372122 ERICH3Q5RHP9 1530 aa22.05■■□□□ 1.12
GFI1B-202ENST00000372122 CARMIL1Q5VZK9 1371 aa22.03■■□□□ 1.12
GFI1B-202ENST00000372122 PBRM1Q86U86 1689 aa22.01■■□□□ 1.11
GFI1B-202ENST00000372122 CUL7Q14999 1698 aa22■■□□□ 1.11
GFI1B-202ENST00000372122 EIF4G3O43432 1585 aaKnown RBP22■■□□□ 1.11
GFI1B-202ENST00000372122 UBTFP17480 764 aaKnown RBP21.99■■□□□ 1.11
GFI1B-202ENST00000372122 TNIKQ9UKE5 1360 aa21.99■■□□□ 1.11
GFI1B-202ENST00000372122 GRIN2BQ13224 1484 aa21.97■■□□□ 1.11
GFI1B-202ENST00000372122 ADAMTS12P58397 1594 aa21.88■■□□□ 1.09
GFI1B-202ENST00000372122 FHAD1B1AJZ9 1412 aa21.86■■□□□ 1.09
GFI1B-202ENST00000372122 CEP162Q5TB80 1403 aa21.85■■□□□ 1.09
GFI1B-202ENST00000372122 SNAPC4Q5SXM2 1469 aa21.85■■□□□ 1.09
GFI1B-202ENST00000372122 MAGI1Q96QZ7 1491 aaPredicted RBP21.81■■□□□ 1.08
GFI1B-202ENST00000372122 CTTNBP2Q8WZ74 1663 aa21.73■■□□□ 1.07
GFI1B-202ENST00000372122 SYNJ2O15056 1496 aa21.73■■□□□ 1.07
GFI1B-202ENST00000372122 CLIP1P30622 1438 aa21.73■■□□□ 1.07
GFI1B-202ENST00000372122 GRIN2AQ12879 1464 aa21.71■■□□□ 1.07
GFI1B-202ENST00000372122 RANGAP1P46060 587 aaPredicted RBP21.7■■□□□ 1.06
Retrieved 100 of 20,778 RNA–protein pairs in 73.8 ms