RNA–Protein interactions for RNA: ENST00000371993.6

DCX-203, Transcript of doublecortin, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene DCX, Length 9,231 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DCX-203ENST00000371993 NISCHQ9Y2I1 1504 aa12.36□□□□□ -0.43
DCX-203ENST00000371993 DCAF8L2P0C7V8 631 aa12.19□□□□□ -0.46
DCX-203ENST00000371993 SUPT5HO00267 1087 aaKnown RBP11.63□□□□□ -0.55
DCX-203ENST00000371993 SHROOM4Q9ULL8 1493 aa11.36□□□□□ -0.59
DCX-203ENST00000371993 FAM9AQ8IZU1 332 aaPredicted RBP11.3□□□□□ -0.6
DCX-203ENST00000371993 APLP2Q06481 763 aa11.29□□□□□ -0.6
DCX-203ENST00000371993 PELP1Q8IZL8 1130 aaKnown RBP11.28□□□□□ -0.6
DCX-203ENST00000371993 ZEB1P37275 1124 aaPredicted RBP11.14□□□□□ -0.63
DCX-203ENST00000371993 TRIM41Q8WV44 630 aa11□□□□□ -0.65
DCX-203ENST00000371993 CENPBP07199 599 aaPredicted RBP10.86□□□□□ -0.67
DCX-203ENST00000371993 EHMT2Q96KQ7 1210 aa10.84□□□□□ -0.67
DCX-203ENST00000371993 PCGF6Q9BYE7 350 aa10.81□□□□□ -0.68
DCX-203ENST00000371993 UBTFP17480 764 aaKnown RBP10.79□□□□□ -0.68
DCX-203ENST00000371993 CCER1Q8TC90 406 aaPredicted RBP10.78□□□□□ -0.68
DCX-203ENST00000371993 TRIM26Q12899 539 aaPredicted RBP10.7□□□□□ -0.7
DCX-203ENST00000371993 ATP1B4Q9UN42 357 aaPredicted RBP10.62□□□□□ -0.71
DCX-203ENST00000371993 MYT1Q01538 1121 aa10.61□□□□□ -0.71
DCX-203ENST00000371993 CHIC1Q5VXU3 224 aa10.58□□□□□ -0.72
DCX-203ENST00000371993 NEFLP07196 543 aa10.58□□□□□ -0.72
DCX-203ENST00000371993 ERICH6Q7L0X2 663 aa10.55□□□□□ -0.72
DCX-203ENST00000371993 TTBK1Q5TCY1 1321 aaPredicted RBP10.51□□□□□ -0.73
DCX-203ENST00000371993 RANGAP1P46060 587 aaPredicted RBP10.51□□□□□ -0.73
DCX-203ENST00000371993 HRCP23327 699 aa10.48□□□□□ -0.73
DCX-203ENST00000371993 ABCC9O60706 1549 aa10.33□□□□□ -0.76
DCX-203ENST00000371993 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP10.33□□□□□ -0.76
DCX-203ENST00000371993 HNRNPUL2Q1KMD3 747 aaKnown RBP10.33□□□□□ -0.76
DCX-203ENST00000371993 LOC105371045A0A1W2PR82 267 aa10.31□□□□□ -0.76
DCX-203ENST00000371993 ZCCHC6Q5VYS8 1495 aaKnown RBP10.25□□□□□ -0.77
DCX-203ENST00000371993 MYT1LQ9UL68 1186 aa10.25□□□□□ -0.77
DCX-203ENST00000371993 CCDC180Q9P1Z9 1646 aa10.23□□□□□ -0.77
DCX-203ENST00000371993 ITGAEP38570 1179 aa10.22□□□□□ -0.77
DCX-203ENST00000371993 CSRNP3Q8WYN3 585 aa10.22□□□□□ -0.77
DCX-203ENST00000371993 PPARGC1BQ86YN6 1023 aaKnown RBP10.21□□□□□ -0.78
DCX-203ENST00000371993 DAXXQ9UER7 740 aaPredicted RBP10.19□□□□□ -0.78
DCX-203ENST00000371993 YTHDC1Q96MU7 727 aaKnown RBP10.18□□□□□ -0.78
DCX-203ENST00000371993 PABPN1Q86U42 306 aaKnown RBP eCLIP10.17□□□□□ -0.78
DCX-203ENST00000371993 DIEXFQ68CQ4 756 aaKnown RBP10.16□□□□□ -0.78
DCX-203ENST00000371993 ACIN1Q9UKV3 1341 aaKnown RBP10.15□□□□□ -0.79
DCX-203ENST00000371993 FAM50AQ14320 339 aaKnown RBP10.14□□□□□ -0.79
DCX-203ENST00000371993 CDK11AQ9UQ88 783 aaPredicted RBP10.14□□□□□ -0.79
DCX-203ENST00000371993 TRIM52Q96A61 297 aa10.1□□□□□ -0.79
DCX-203ENST00000371993 CLSPNQ9HAW4 1339 aa10.09□□□□□ -0.79
DCX-203ENST00000371993 POLR3GLQ9BT43 218 aa10.08□□□□□ -0.8
DCX-203ENST00000371993 ANP32CO43423 234 aa10.07□□□□□ -0.8
DCX-203ENST00000371993 DCAF1Q9Y4B6 1507 aa10.07□□□□□ -0.8
DCX-203ENST00000371993 EEA1Q15075 1411 aa10.06□□□□□ -0.8
DCX-203ENST00000371993 ZNF316A6NFI3 1004 aaPredicted RBP10.06□□□□□ -0.8
DCX-203ENST00000371993 SCRIBQ14160 1630 aa10.04□□□□□ -0.8
DCX-203ENST00000371993 RB1CC1Q8TDY2 1594 aa9.99□□□□□ -0.81
DCX-203ENST00000371993 NACADO15069 1562 aa9.99□□□□□ -0.81
DCX-203ENST00000371993 NEUROD1Q13562 356 aa9.95□□□□□ -0.82
DCX-203ENST00000371993 RTL5Q5HYW3 569 aaPredicted RBP9.95□□□□□ -0.82
DCX-203ENST00000371993 NEFMP07197 916 aa9.93□□□□□ -0.82
DCX-203ENST00000371993 SLC4A1APQ9BWU0 796 aaKnown RBP9.93□□□□□ -0.82
DCX-203ENST00000371993 ZBTB47Q9UFB7 747 aaPredicted RBP9.91□□□□□ -0.82
DCX-203ENST00000371993 FBLN2P98095 1184 aa9.89□□□□□ -0.83
DCX-203ENST00000371993 TONSLQ96HA7 1378 aa9.87□□□□□ -0.83
DCX-203ENST00000371993 NPM1P06748 294 aaKnown RBP eCLIP9.87□□□□□ -0.83
DCX-203ENST00000371993 RSF1Q96T23 1441 aaPredicted RBP9.86□□□□□ -0.83
DCX-203ENST00000371993 GOLGA3Q08378 1498 aa9.83□□□□□ -0.84
DCX-203ENST00000371993 TSPY4P0CV99 314 aa9.82□□□□□ -0.84
DCX-203ENST00000371993 TSPY10P0CW01 314 aa9.82□□□□□ -0.84
DCX-203ENST00000371993 P3H3Q8IVL6 736 aa9.81□□□□□ -0.84
DCX-203ENST00000371993 TNIKQ9UKE5 1360 aa9.79□□□□□ -0.84
DCX-203ENST00000371993 GTF3C3Q9Y5Q9 886 aa9.79□□□□□ -0.84
DCX-203ENST00000371993 MTUS2Q5JR59 1369 aa9.79□□□□□ -0.84
DCX-203ENST00000371993 CLIP1P30622 1438 aa9.79□□□□□ -0.84
DCX-203ENST00000371993 ZNF326Q5BKZ1 582 aaKnown RBP9.79□□□□□ -0.84
DCX-203ENST00000371993 BAZ1AQ9NRL2 1556 aaPredicted RBP9.78□□□□□ -0.84
DCX-203ENST00000371993 CNGB1Q14028 1251 aaPredicted RBP9.78□□□□□ -0.84
DCX-203ENST00000371993 ESF1Q9H501 851 aaKnown RBP9.78□□□□□ -0.84
DCX-203ENST00000371993 KIF27Q86VH2 1401 aa9.77□□□□□ -0.85
DCX-203ENST00000371993 WRNQ14191 1432 aaPredicted RBP eCLIP9.77□□□□□ -0.85
DCX-203ENST00000371993 CEP164Q9UPV0 1460 aa9.76□□□□□ -0.85
DCX-203ENST00000371993 ZNF777Q9ULD5 760 aaPredicted RBP9.76□□□□□ -0.85
DCX-203ENST00000371993 GOLGA6L2Q8N9W4 650 aaPredicted RBP9.76□□□□□ -0.85
DCX-203ENST00000371993 MYO15BQ96JP2 1530 aa9.75□□□□□ -0.85
DCX-203ENST00000371993 CANXP27824 592 aaKnown RBP9.75□□□□□ -0.85
DCX-203ENST00000371993 SLC24A1O60721 1099 aa9.75□□□□□ -0.85
DCX-203ENST00000371993 TIMELESSQ9UNS1 1208 aa9.74□□□□□ -0.85
DCX-203ENST00000371993 BAZ1BQ9UIG0 1483 aaKnown RBP9.74□□□□□ -0.85
DCX-203ENST00000371993 ANP32AP39687 249 aaKnown RBP9.73□□□□□ -0.85
DCX-203ENST00000371993 CHMP7Q8WUX9 453 aaPredicted RBP9.72□□□□□ -0.85
DCX-203ENST00000371993 PLEKHD1A6NEE1 506 aa9.7□□□□□ -0.86
DCX-203ENST00000371993 EIF4G2P78344 907 aaKnown RBP eCLIP9.69□□□□□ -0.86
DCX-203ENST00000371993 CDCA8Q53HL2 280 aa9.69□□□□□ -0.86
DCX-203ENST00000371993 CEP162Q5TB80 1403 aa9.69□□□□□ -0.86
DCX-203ENST00000371993 FHAD1B1AJZ9 1412 aa9.68□□□□□ -0.86
DCX-203ENST00000371993 BCANQ96GW7 911 aa9.67□□□□□ -0.86
DCX-203ENST00000371993 STAG3Q9UJ98 1225 aa9.67□□□□□ -0.86
DCX-203ENST00000371993 UPF2Q9HAU5 1272 aaKnown RBP9.67□□□□□ -0.86
DCX-203ENST00000371993 TMC1Q8TDI8 760 aa9.67□□□□□ -0.86
DCX-203ENST00000371993 EIF5BO60841 1220 aaKnown RBP9.67□□□□□ -0.86
DCX-203ENST00000371993 HNRNPUQ00839 825 aaKnown RBP eCLIP9.63□□□□□ -0.87
DCX-203ENST00000371993 DDX10Q13206 875 aaKnown RBP9.63□□□□□ -0.87
DCX-203ENST00000371993 WDR43Q15061 677 aaKnown RBP eCLIP9.63□□□□□ -0.87
DCX-203ENST00000371993 CHGAP10645 457 aaKnown RBP9.61□□□□□ -0.87
DCX-203ENST00000371993 ARID3CA6NKF2 412 aa9.59□□□□□ -0.87
DCX-203ENST00000371993 ANP32BQ92688 251 aaKnown RBP9.59□□□□□ -0.87
DCX-203ENST00000371993 FKBP8Q14318 412 aa9.58□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 10.8 ms