RNA–Protein interactions for RNA: ENST00000371649.5

EDF1-203, Transcript of endothelial differentiation related factor 1, humanhuman

TSL 2 BASIC

Gene EDF1, Length 790 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EDF1-203ENST00000371649 NISCHQ9Y2I1 1504 aa39.56■■■■□ 3.92
EDF1-203ENST00000371649 ABCC9O60706 1549 aa36.24■■■■□ 3.39
EDF1-203ENST00000371649 CCDC180Q9P1Z9 1646 aa35.74■■■■□ 3.31
EDF1-203ENST00000371649 RB1CC1Q8TDY2 1594 aa34.31■■■■□ 3.08
EDF1-203ENST00000371649 DNAJC5BQ9UF47 199 aa34.25■■■■□ 3.07
EDF1-203ENST00000371649 NACADO15069 1562 aa33.9■■■■□ 3.02
EDF1-203ENST00000371649 DCAF8L2P0C7V8 631 aa33.9■■■■□ 3.02
EDF1-203ENST00000371649 PABPN1Q86U42 306 aaKnown RBP eCLIP33.69■■■□□ 2.98
EDF1-203ENST00000371649 UNC13AQ9UPW8 1703 aa33.45■■■□□ 2.95
EDF1-203ENST00000371649 MYO15BQ96JP2 1530 aa33.19■■■□□ 2.9
EDF1-203ENST00000371649 BICRAQ9NZM4 1560 aa33.15■■■□□ 2.9
EDF1-203ENST00000371649 SHROOM4Q9ULL8 1493 aa32.74■■■□□ 2.83
EDF1-203ENST00000371649 CECR2Q9BXF3 1484 aa32.68■■■□□ 2.82
EDF1-203ENST00000371649 CC2D2AQ9P2K1 1620 aa32.67■■■□□ 2.82
EDF1-203ENST00000371649 ZCCHC6Q5VYS8 1495 aaKnown RBP32.65■■■□□ 2.82
EDF1-203ENST00000371649 DCAF1Q9Y4B6 1507 aa32.61■■■□□ 2.81
EDF1-203ENST00000371649 SCRIBQ14160 1630 aa32.59■■■□□ 2.81
EDF1-203ENST00000371649 EIF4G1Q04637 1599 aaKnown RBP32.48■■■□□ 2.79
EDF1-203ENST00000371649 DNAJC5Q9H3Z4 198 aa31.9■■■□□ 2.7
EDF1-203ENST00000371649 ERCC6Q03468 1493 aa31.44■■■□□ 2.62
EDF1-203ENST00000371649 CUX2O14529 1486 aa31.4■■■□□ 2.62
EDF1-203ENST00000371649 NCAPD3P42695 1498 aa31.25■■■□□ 2.59
EDF1-203ENST00000371649 ATAD2BQ9ULI0 1458 aa31.1■■■□□ 2.57
EDF1-203ENST00000371649 SMARCA2P51531 1590 aa31.07■■■□□ 2.56
EDF1-203ENST00000371649 HMGXB3Q12766 1538 aa31■■■□□ 2.55
EDF1-203ENST00000371649 SMARCA4P51532 1647 aa30.98■■■□□ 2.55
EDF1-203ENST00000371649 NESP48681 1621 aa30.94■■■□□ 2.54
EDF1-203ENST00000371649 BAZ1BQ9UIG0 1483 aaKnown RBP30.88■■■□□ 2.53
EDF1-203ENST00000371649 BAZ1AQ9NRL2 1556 aaPredicted RBP30.8■■■□□ 2.52
EDF1-203ENST00000371649 LAMC3Q9Y6N6 1575 aa30.71■■■□□ 2.51
EDF1-203ENST00000371649 THOC2Q8NI27 1593 aaKnown RBP30.69■■■□□ 2.5
EDF1-203ENST00000371649 PEG3Q9GZU2 1588 aa30.61■■■□□ 2.49
EDF1-203ENST00000371649 PDS5BQ9NTI5 1447 aa30.59■■■□□ 2.49
EDF1-203ENST00000371649 KIF21AQ7Z4S6 1674 aa30.57■■■□□ 2.48
EDF1-203ENST00000371649 TRIM41Q8WV44 630 aa30.49■■■□□ 2.47
EDF1-203ENST00000371649 MROH2BQ7Z745 1585 aa30.46■■■□□ 2.47
EDF1-203ENST00000371649 CADPSQ9ULU8 1353 aa30.33■■■□□ 2.45
EDF1-203ENST00000371649 MRC2Q9UBG0 1479 aa30.31■■■□□ 2.44
EDF1-203ENST00000371649 WDR62O43379 1518 aa30.18■■■□□ 2.42
EDF1-203ENST00000371649 WIZO95785 1651 aa30.14■■■□□ 2.41
EDF1-203ENST00000371649 CEP164Q9UPV0 1460 aa30.13■■■□□ 2.41
EDF1-203ENST00000371649 FANCD2Q9BXW9 1451 aa30.02■■■□□ 2.4
EDF1-203ENST00000371649 OSCARQ8IYS5 282 aa29.99■■■□□ 2.39
EDF1-203ENST00000371649 CFTRP13569 1480 aa29.84■■■□□ 2.37
EDF1-203ENST00000371649 URB2Q14146 1524 aaKnown RBP29.72■■■□□ 2.35
EDF1-203ENST00000371649 TOP2AP11388 1531 aaKnown RBP29.71■■■□□ 2.35
EDF1-203ENST00000371649 RSF1Q96T23 1441 aaPredicted RBP29.66■■■□□ 2.34
EDF1-203ENST00000371649 PRDM2Q13029 1718 aa29.6■■■□□ 2.33
EDF1-203ENST00000371649 RIMBP3CA6NJZ7 1639 aa29.56■■■□□ 2.32
EDF1-203ENST00000371649 RIMBP3BA6NNM3 1639 aa29.56■■■□□ 2.32
EDF1-203ENST00000371649 RIMBP3Q9UFD9 1639 aa29.56■■■□□ 2.32
EDF1-203ENST00000371649 IFT140Q96RY7 1462 aa29.51■■■□□ 2.31
EDF1-203ENST00000371649 ZNF608Q9ULD9 1512 aaPredicted RBP29.45■■■□□ 2.3
EDF1-203ENST00000371649 ARHGEF11O15085 1522 aa29.41■■■□□ 2.3
EDF1-203ENST00000371649 CCDC88BA6NC98 1476 aa29.36■■■□□ 2.29
EDF1-203ENST00000371649 TOPBP1Q92547 1522 aa29.36■■■□□ 2.29
EDF1-203ENST00000371649 ABCC8Q09428 1581 aa29.35■■■□□ 2.29
EDF1-203ENST00000371649 CYB5RLQ6IPT4 315 aa29.33■■■□□ 2.29
EDF1-203ENST00000371649 EIF4G3O43432 1585 aaKnown RBP29.31■■■□□ 2.28
EDF1-203ENST00000371649 TRHP20396 242 aaPredicted RBP29.28■■■□□ 2.28
EDF1-203ENST00000371649 FBLN2P98095 1184 aa29.27■■■□□ 2.28
EDF1-203ENST00000371649 DNMBPQ6XZF7 1577 aa29.24■■■□□ 2.27
EDF1-203ENST00000371649 CHD1O14646 1710 aa29.22■■■□□ 2.27
EDF1-203ENST00000371649 AQRO60306 1485 aaKnown RBP eCLIP29.17■■■□□ 2.263e-7■■■■■ 38.9
EDF1-203ENST00000371649 TARBP1Q13395 1621 aaKnown RBP29.09■■■□□ 2.25
EDF1-203ENST00000371649 ARAP1Q96P48 1450 aa29.04■■■□□ 2.24
EDF1-203ENST00000371649 POLA1P09884 1462 aaPredicted RBP29.02■■■□□ 2.24
EDF1-203ENST00000371649 SOGA1O94964 1423 aa28.96■■■□□ 2.23
EDF1-203ENST00000371649 TDRD9Q8NDG6 1382 aaKnown RBP28.95■■■□□ 2.22
EDF1-203ENST00000371649 RAD54L2Q9Y4B4 1467 aa28.94■■■□□ 2.22
EDF1-203ENST00000371649 CHMP7Q8WUX9 453 aaPredicted RBP28.93■■■□□ 2.22
EDF1-203ENST00000371649 SNAPC4Q5SXM2 1469 aa28.87■■■□□ 2.21
EDF1-203ENST00000371649 SYNJ1O43426 1573 aa28.85■■■□□ 2.21
EDF1-203ENST00000371649 AEBP2Q6ZN18 517 aaPredicted RBP28.84■■■□□ 2.21
EDF1-203ENST00000371649 WDR97A6NE52 1622 aa28.83■■■□□ 2.21
EDF1-203ENST00000371649 FGD5Q6ZNL6 1462 aa28.81■■■□□ 2.2
EDF1-203ENST00000371649 MAGI1Q96QZ7 1491 aaPredicted RBP28.78■■■□□ 2.2
EDF1-203ENST00000371649 CLASP1Q7Z460 1538 aa28.77■■■□□ 2.2
EDF1-203ENST00000371649 GRIN2BQ13224 1484 aa28.74■■■□□ 2.19
EDF1-203ENST00000371649 SYNJ2O15056 1496 aa28.69■■■□□ 2.18
EDF1-203ENST00000371649 CUX1P39880 1505 aa28.65■■■□□ 2.18
EDF1-203ENST00000371649 PBRM1Q86U86 1689 aa28.62■■■□□ 2.17
EDF1-203ENST00000371649 GAPVD1Q14C86 1478 aa28.59■■■□□ 2.17
EDF1-203ENST00000371649 ABCA10Q8WWZ4 1543 aa28.42■■■□□ 2.14
EDF1-203ENST00000371649 ABCA5Q8WWZ7 1642 aa28.4■■■□□ 2.14
EDF1-203ENST00000371649 GRIN2AQ12879 1464 aa28.35■■■□□ 2.13
EDF1-203ENST00000371649 WRNQ14191 1432 aaPredicted RBP eCLIP28.31■■■□□ 2.12
EDF1-203ENST00000371649 ERCC6L2Q5T890 1561 aa28.28■■■□□ 2.12
EDF1-203ENST00000371649 CEP170Q5SW79 1584 aa28.27■■■□□ 2.12
EDF1-203ENST00000371649 ADAMTS12P58397 1594 aa28.25■■■□□ 2.11
EDF1-203ENST00000371649 SUPT5HO00267 1087 aaKnown RBP28.24■■■□□ 2.11
EDF1-203ENST00000371649 NUP160Q12769 1436 aa28.2■■■□□ 2.11
EDF1-203ENST00000371649 FHAD1B1AJZ9 1412 aa28.19■■■□□ 2.1
EDF1-203ENST00000371649 SHROOM2Q13796 1616 aa28.14■■■□□ 2.09
EDF1-203ENST00000371649 TOP2BQ02880 1626 aa28.11■■■□□ 2.09
EDF1-203ENST00000371649 BIVM-ERCC5R4GMW8 1640 aa28.1■■■□□ 2.09
EDF1-203ENST00000371649 NPM1P06748 294 aaKnown RBP eCLIP28.1■■■□□ 2.09
EDF1-203ENST00000371649 PRG4Q92954 1404 aaPredicted RBP28.09■■■□□ 2.09
EDF1-203ENST00000371649 ERICH3Q5RHP9 1530 aa28.08■■■□□ 2.09
EDF1-203ENST00000371649 KIF13AQ9H1H9 1805 aa28.07■■■□□ 2.08
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms