RNA–Protein interactions for RNA: ENST00000370404.5

CXorf40B-202, Transcript of chromosome X open reading frame 40B, humanhuman

APPRIS P2 TSL 2 BASIC

Gene CXorf40B, Length 1,316 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXorf40B-202ENST00000370404 NISCHQ9Y2I1 1504 aa35.45■■■■□ 3.27
CXorf40B-202ENST00000370404 ABCC9O60706 1549 aa32.13■■■□□ 2.73
CXorf40B-202ENST00000370404 CCDC180Q9P1Z9 1646 aa31.43■■■□□ 2.62
CXorf40B-202ENST00000370404 DNAJC5BQ9UF47 199 aa31.05■■■□□ 2.56
CXorf40B-202ENST00000370404 RB1CC1Q8TDY2 1594 aa30.11■■■□□ 2.41
CXorf40B-202ENST00000370404 DCAF8L2P0C7V8 631 aa29.68■■■□□ 2.34
CXorf40B-202ENST00000370404 PABPN1Q86U42 306 aaKnown RBP eCLIP29.68■■■□□ 2.34
CXorf40B-202ENST00000370404 NACADO15069 1562 aa29.59■■■□□ 2.33
CXorf40B-202ENST00000370404 ZCCHC6Q5VYS8 1495 aaKnown RBP29.55■■■□□ 2.32
CXorf40B-202ENST00000370404 UNC13AQ9UPW8 1703 aa29.51■■■□□ 2.31
CXorf40B-202ENST00000370404 MYO15BQ96JP2 1530 aa29.41■■■□□ 2.3
CXorf40B-202ENST00000370404 DNAJC5Q9H3Z4 198 aa29.37■■■□□ 2.29
CXorf40B-202ENST00000370404 DCAF1Q9Y4B6 1507 aa29.31■■■□□ 2.28
CXorf40B-202ENST00000370404 BICRAQ9NZM4 1560 aa29.24■■■□□ 2.27
CXorf40B-202ENST00000370404 CECR2Q9BXF3 1484 aa29.06■■■□□ 2.24
CXorf40B-202ENST00000370404 CC2D2AQ9P2K1 1620 aa29■■■□□ 2.23
CXorf40B-202ENST00000370404 SCRIBQ14160 1630 aa28.75■■■□□ 2.19
CXorf40B-202ENST00000370404 SHROOM4Q9ULL8 1493 aa28.73■■■□□ 2.19
CXorf40B-202ENST00000370404 EIF4G1Q04637 1599 aaKnown RBP28.64■■■□□ 2.18
CXorf40B-202ENST00000370404 CUX2O14529 1486 aa28.16■■■□□ 2.1
CXorf40B-202ENST00000370404 ERCC6Q03468 1493 aa27.86■■■□□ 2.05
CXorf40B-202ENST00000370404 TRIM41Q8WV44 630 aa27.68■■■□□ 2.02
CXorf40B-202ENST00000370404 SMARCA4P51532 1647 aa27.48■■□□□ 1.99
CXorf40B-202ENST00000370404 BAZ1AQ9NRL2 1556 aaPredicted RBP27.47■■□□□ 1.99
CXorf40B-202ENST00000370404 MROH2BQ7Z745 1585 aa27.34■■□□□ 1.97
CXorf40B-202ENST00000370404 ATAD2BQ9ULI0 1458 aa27.34■■□□□ 1.97
CXorf40B-202ENST00000370404 NCAPD3P42695 1498 aa27.3■■□□□ 1.96
CXorf40B-202ENST00000370404 SMARCA2P51531 1590 aa27.3■■□□□ 1.96
CXorf40B-202ENST00000370404 THOC2Q8NI27 1593 aaKnown RBP27.28■■□□□ 1.96
CXorf40B-202ENST00000370404 NESP48681 1621 aa27.27■■□□□ 1.96
CXorf40B-202ENST00000370404 PEG3Q9GZU2 1588 aa27.19■■□□□ 1.94
CXorf40B-202ENST00000370404 HMGXB3Q12766 1538 aa27.16■■□□□ 1.94
CXorf40B-202ENST00000370404 BAZ1BQ9UIG0 1483 aaKnown RBP27.13■■□□□ 1.93
CXorf40B-202ENST00000370404 RSF1Q96T23 1441 aaPredicted RBP27.06■■□□□ 1.92
CXorf40B-202ENST00000370404 WIZO95785 1651 aa27.02■■□□□ 1.92
CXorf40B-202ENST00000370404 KIF21AQ7Z4S6 1674 aa26.98■■□□□ 1.91
CXorf40B-202ENST00000370404 LAMC3Q9Y6N6 1575 aa26.92■■□□□ 1.9
CXorf40B-202ENST00000370404 PDS5BQ9NTI5 1447 aa26.76■■□□□ 1.87
CXorf40B-202ENST00000370404 TOP2AP11388 1531 aaKnown RBP26.76■■□□□ 1.87
CXorf40B-202ENST00000370404 MRC2Q9UBG0 1479 aa26.63■■□□□ 1.85
CXorf40B-202ENST00000370404 OSCARQ8IYS5 282 aa26.62■■□□□ 1.85
CXorf40B-202ENST00000370404 WDR62O43379 1518 aa26.61■■□□□ 1.85
CXorf40B-202ENST00000370404 CADPSQ9ULU8 1353 aa26.54■■□□□ 1.84
CXorf40B-202ENST00000370404 RIMBP3CA6NJZ7 1639 aa26.52■■□□□ 1.84
CXorf40B-202ENST00000370404 RIMBP3BA6NNM3 1639 aa26.52■■□□□ 1.84
CXorf40B-202ENST00000370404 RIMBP3Q9UFD9 1639 aa26.52■■□□□ 1.84
CXorf40B-202ENST00000370404 SUPT5HO00267 1087 aaKnown RBP26.49■■□□□ 1.83
CXorf40B-202ENST00000370404 CCDC88BA6NC98 1476 aa26.46■■□□□ 1.83
CXorf40B-202ENST00000370404 CFTRP13569 1480 aa26.38■■□□□ 1.81
CXorf40B-202ENST00000370404 AEBP2Q6ZN18 517 aaPredicted RBP26.31■■□□□ 1.8
CXorf40B-202ENST00000370404 CEP164Q9UPV0 1460 aa26.3■■□□□ 1.8
CXorf40B-202ENST00000370404 ARHGEF11O15085 1522 aa26.28■■□□□ 1.8
CXorf40B-202ENST00000370404 FANCD2Q9BXW9 1451 aa26.23■■□□□ 1.79
CXorf40B-202ENST00000370404 TRHP20396 242 aaPredicted RBP26.2■■□□□ 1.79
CXorf40B-202ENST00000370404 CYB5RLQ6IPT4 315 aa26.09■■□□□ 1.77
CXorf40B-202ENST00000370404 PRDM2Q13029 1718 aa26.07■■□□□ 1.76
CXorf40B-202ENST00000370404 URB2Q14146 1524 aaKnown RBP26■■□□□ 1.75
CXorf40B-202ENST00000370404 ARAP1Q96P48 1450 aa25.93■■□□□ 1.74
CXorf40B-202ENST00000370404 ZNF608Q9ULD9 1512 aaPredicted RBP25.87■■□□□ 1.73
CXorf40B-202ENST00000370404 CHD1O14646 1710 aa25.81■■□□□ 1.72
CXorf40B-202ENST00000370404 TOPBP1Q92547 1522 aa25.81■■□□□ 1.72
CXorf40B-202ENST00000370404 IFT140Q96RY7 1462 aa25.79■■□□□ 1.72
CXorf40B-202ENST00000370404 ABCC8Q09428 1581 aa25.78■■□□□ 1.72
CXorf40B-202ENST00000370404 DNMBPQ6XZF7 1577 aa25.77■■□□□ 1.72
CXorf40B-202ENST00000370404 EIF4G3O43432 1585 aaKnown RBP25.75■■□□□ 1.71
CXorf40B-202ENST00000370404 CUX1P39880 1505 aa25.64■■□□□ 1.7
CXorf40B-202ENST00000370404 POLA1P09884 1462 aaPredicted RBP25.59■■□□□ 1.69
CXorf40B-202ENST00000370404 FGD5Q6ZNL6 1462 aa25.55■■□□□ 1.68
CXorf40B-202ENST00000370404 FBLN2P98095 1184 aa25.54■■□□□ 1.68
CXorf40B-202ENST00000370404 WRNQ14191 1432 aaPredicted RBP eCLIP25.53■■□□□ 1.68
CXorf40B-202ENST00000370404 SOGA1O94964 1423 aa25.51■■□□□ 1.67
CXorf40B-202ENST00000370404 RAD54L2Q9Y4B4 1467 aa25.5■■□□□ 1.67
CXorf40B-202ENST00000370404 TARBP1Q13395 1621 aaKnown RBP25.48■■□□□ 1.67
CXorf40B-202ENST00000370404 AQRO60306 1485 aaKnown RBP eCLIP25.47■■□□□ 1.678e-7■■■■■ 28.7
CXorf40B-202ENST00000370404 SYNJ1O43426 1573 aa25.43■■□□□ 1.66
CXorf40B-202ENST00000370404 TOP2BQ02880 1626 aa25.41■■□□□ 1.66
CXorf40B-202ENST00000370404 CLASP1Q7Z460 1538 aa25.4■■□□□ 1.66
CXorf40B-202ENST00000370404 BIVM-ERCC5R4GMW8 1640 aa25.39■■□□□ 1.66
CXorf40B-202ENST00000370404 TDRD9Q8NDG6 1382 aaKnown RBP25.38■■□□□ 1.65
CXorf40B-202ENST00000370404 ILDR1Q86SU0 546 aaPredicted RBP25.32■■□□□ 1.64
CXorf40B-202ENST00000370404 ABCA10Q8WWZ4 1543 aa25.29■■□□□ 1.64
CXorf40B-202ENST00000370404 WDR97A6NE52 1622 aa25.27■■□□□ 1.64
CXorf40B-202ENST00000370404 SNAPC4Q5SXM2 1469 aa25.22■■□□□ 1.63
CXorf40B-202ENST00000370404 GAPVD1Q14C86 1478 aa25.21■■□□□ 1.63
CXorf40B-202ENST00000370404 GRIN2BQ13224 1484 aa25.19■■□□□ 1.62
CXorf40B-202ENST00000370404 ABCA5Q8WWZ7 1642 aa25.16■■□□□ 1.62
CXorf40B-202ENST00000370404 CHMP7Q8WUX9 453 aaPredicted RBP25.14■■□□□ 1.62
CXorf40B-202ENST00000370404 MAGI1Q96QZ7 1491 aaPredicted RBP25.1■■□□□ 1.61
CXorf40B-202ENST00000370404 PBRM1Q86U86 1689 aa25.08■■□□□ 1.61
CXorf40B-202ENST00000370404 KIF13AQ9H1H9 1805 aa25.05■■□□□ 1.6
CXorf40B-202ENST00000370404 SYNJ2O15056 1496 aa25.02■■□□□ 1.6
CXorf40B-202ENST00000370404 ERICH3Q5RHP9 1530 aa24.99■■□□□ 1.59
CXorf40B-202ENST00000370404 KIF27Q86VH2 1401 aa24.99■■□□□ 1.59
CXorf40B-202ENST00000370404 ADAMTS12P58397 1594 aa24.93■■□□□ 1.58
CXorf40B-202ENST00000370404 FHAD1B1AJZ9 1412 aa24.93■■□□□ 1.58
CXorf40B-202ENST00000370404 ERCC6L2Q5T890 1561 aa24.92■■□□□ 1.58
CXorf40B-202ENST00000370404 IGF1RP08069 1367 aa24.87■■□□□ 1.57
CXorf40B-202ENST00000370404 KDM4FA0A1W2PPD8 638 aa24.86■■□□□ 1.57
CXorf40B-202ENST00000370404 GRIN2AQ12879 1464 aa24.86■■□□□ 1.57
CXorf40B-202ENST00000370404 RUSC2Q8N2Y8 1516 aa24.78■■□□□ 1.56
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms