RNA–Protein interactions for RNA: ENST00000370314.8

GABRA3-201, Transcript of gamma-aminobutyric acid type A receptor alpha3 subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GABRA3, Length 3,712 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABRA3-201ENST00000370314 NISCHQ9Y2I1 1504 aa11.11□□□□□ -0.63
GABRA3-201ENST00000370314 CCDC180Q9P1Z9 1646 aa10.57□□□□□ -0.72
GABRA3-201ENST00000370314 SLC24A1O60721 1099 aa10.56□□□□□ -0.72
GABRA3-201ENST00000370314 ABCC9O60706 1549 aa10.39□□□□□ -0.75
GABRA3-201ENST00000370314 DNAJC5BQ9UF47 199 aa10.34□□□□□ -0.75
GABRA3-201ENST00000370314 UNC13AQ9UPW8 1703 aa10.12□□□□□ -0.79
GABRA3-201ENST00000370314 RB1CC1Q8TDY2 1594 aa10.02□□□□□ -0.81
GABRA3-201ENST00000370314 BICRAQ9NZM4 1560 aa9.96□□□□□ -0.81
GABRA3-201ENST00000370314 EHMT2Q96KQ7 1210 aa9.96□□□□□ -0.82
GABRA3-201ENST00000370314 DNAJC5Q9H3Z4 198 aa9.94□□□□□ -0.82
GABRA3-201ENST00000370314 SHROOM4Q9ULL8 1493 aa9.92□□□□□ -0.82
GABRA3-201ENST00000370314 NACADO15069 1562 aa9.91□□□□□ -0.82
GABRA3-201ENST00000370314 MYO15BQ96JP2 1530 aa9.87□□□□□ -0.83
GABRA3-201ENST00000370314 PLPPR3Q6T4P5 718 aa9.84□□□□□ -0.83
GABRA3-201ENST00000370314 CHIC1Q5VXU3 224 aa9.78□□□□□ -0.84
GABRA3-201ENST00000370314 CC2D2AQ9P2K1 1620 aa9.7□□□□□ -0.86
GABRA3-201ENST00000370314 RTN4Q9NQC3 1192 aaKnown RBP9.62□□□□□ -0.87
GABRA3-201ENST00000370314 CUX2O14529 1486 aa9.6□□□□□ -0.87
GABRA3-201ENST00000370314 EIF4G1Q04637 1599 aaKnown RBP9.57□□□□□ -0.88
GABRA3-201ENST00000370314 CECR2Q9BXF3 1484 aa9.55□□□□□ -0.88
GABRA3-201ENST00000370314 DAXXQ9UER7 740 aaPredicted RBP9.47□□□□□ -0.89
GABRA3-201ENST00000370314 DCAF1Q9Y4B6 1507 aa9.47□□□□□ -0.89
GABRA3-201ENST00000370314 PRKCSHP14314 528 aaPredicted RBP9.38□□□□□ -0.91
GABRA3-201ENST00000370314 THOC2Q8NI27 1593 aaKnown RBP9.33□□□□□ -0.92
GABRA3-201ENST00000370314 NCBP3Q53F19 620 aaKnown RBP9.31□□□□□ -0.92
GABRA3-201ENST00000370314 PABPN1Q86U42 306 aaKnown RBP eCLIP9.31□□□□□ -0.92
GABRA3-201ENST00000370314 AEBP2Q6ZN18 517 aaPredicted RBP9.31□□□□□ -0.92
GABRA3-201ENST00000370314 KCNA4P22459 653 aa9.25□□□□□ -0.93
GABRA3-201ENST00000370314 ZCCHC6Q5VYS8 1495 aaKnown RBP9.18□□□□□ -0.94
GABRA3-201ENST00000370314 CSRNP3Q8WYN3 585 aa9.15□□□□□ -0.94
GABRA3-201ENST00000370314 TIMELESSQ9UNS1 1208 aa9.1□□□□□ -0.95
GABRA3-201ENST00000370314 HMGXB3Q12766 1538 aa9.1□□□□□ -0.95
GABRA3-201ENST00000370314 NCAPD3P42695 1498 aa9.1□□□□□ -0.95
GABRA3-201ENST00000370314 APLP2Q06481 763 aa9.09□□□□□ -0.95
GABRA3-201ENST00000370314 SCRIBQ14160 1630 aa9.06□□□□□ -0.96
GABRA3-201ENST00000370314 AMER1Q5JTC6 1135 aaPredicted RBP9.06□□□□□ -0.96
GABRA3-201ENST00000370314 PHF23Q9BUL5 403 aaPredicted RBP9.06□□□□□ -0.96
GABRA3-201ENST00000370314 PEG3Q9GZU2 1588 aa9.04□□□□□ -0.96
GABRA3-201ENST00000370314 KIF21AQ7Z4S6 1674 aa9.04□□□□□ -0.96
GABRA3-201ENST00000370314 LAMC3Q9Y6N6 1575 aa9.03□□□□□ -0.96
GABRA3-201ENST00000370314 WDR62O43379 1518 aa9.01□□□□□ -0.97
GABRA3-201ENST00000370314 BAZ1AQ9NRL2 1556 aaPredicted RBP8.99□□□□□ -0.97
GABRA3-201ENST00000370314 PELP1Q8IZL8 1130 aaKnown RBP8.97□□□□□ -0.97
GABRA3-201ENST00000370314 RIMBP3CA6NJZ7 1639 aa8.96□□□□□ -0.98
GABRA3-201ENST00000370314 RIMBP3BA6NNM3 1639 aa8.96□□□□□ -0.98
GABRA3-201ENST00000370314 RIMBP3Q9UFD9 1639 aa8.96□□□□□ -0.98
GABRA3-201ENST00000370314 SMARCA2P51531 1590 aa8.95□□□□□ -0.98
GABRA3-201ENST00000370314 TULP1O00294 542 aaPredicted RBP8.92□□□□□ -0.98
GABRA3-201ENST00000370314 ERCC6Q03468 1493 aa8.91□□□□□ -0.98
GABRA3-201ENST00000370314 MYT1Q01538 1121 aa8.9□□□□□ -0.98
GABRA3-201ENST00000370314 ATAD2BQ9ULI0 1458 aa8.89□□□□□ -0.99
GABRA3-201ENST00000370314 NESP48681 1621 aa8.88□□□□□ -0.99
GABRA3-201ENST00000370314 SMARCA4P51532 1647 aa8.85□□□□□ -0.99
GABRA3-201ENST00000370314 ERICH6Q7L0X2 663 aa8.85□□□□□ -0.99
GABRA3-201ENST00000370314 ARXQ96QS3 562 aa8.85□□□□□ -0.99
GABRA3-201ENST00000370314 KLHL34Q8N239 644 aa8.84□□□□□ -0.99
GABRA3-201ENST00000370314 TAOK2Q9UL54 1235 aa8.82□□□□□ -1
GABRA3-201ENST00000370314 TTBK1Q5TCY1 1321 aaPredicted RBP8.82□□□□□ -1
GABRA3-201ENST00000370314 MRC2Q9UBG0 1479 aa8.79□□□□□ -1
GABRA3-201ENST00000370314 PLEKHG5O94827 1062 aa8.79□□□□□ -1
GABRA3-201ENST00000370314 PRDM2Q13029 1718 aa8.78□□□□□ -1
GABRA3-201ENST00000370314 ARHGEF11O15085 1522 aa8.76□□□□□ -1.01
GABRA3-201ENST00000370314 TPRNQ4KMQ1 711 aa8.73□□□□□ -1.01
GABRA3-201ENST00000370314 PDS5BQ9NTI5 1447 aa8.69□□□□□ -1.02
GABRA3-201ENST00000370314 TRIM41Q8WV44 630 aa8.68□□□□□ -1.02
GABRA3-201ENST00000370314 ARAP1Q96P48 1450 aa8.66□□□□□ -1.02
GABRA3-201ENST00000370314 PODXL2Q9NZ53 605 aa8.66□□□□□ -1.02
GABRA3-201ENST00000370314 EIF5BO60841 1220 aaKnown RBP8.64□□□□□ -1.03
GABRA3-201ENST00000370314 CLASP1Q7Z460 1538 aa8.63□□□□□ -1.03
GABRA3-201ENST00000370314 CHD1O14646 1710 aa8.62□□□□□ -1.03
GABRA3-201ENST00000370314 BCL11AQ9H165 835 aa8.62□□□□□ -1.03
GABRA3-201ENST00000370314 RSF1Q96T23 1441 aaPredicted RBP8.61□□□□□ -1.03
GABRA3-201ENST00000370314 BAZ1BQ9UIG0 1483 aaKnown RBP8.61□□□□□ -1.03
GABRA3-201ENST00000370314 RANGAP1P46060 587 aaPredicted RBP8.6□□□□□ -1.03
GABRA3-201ENST00000370314 HOMEZQ8IX15 550 aa8.6□□□□□ -1.03
GABRA3-201ENST00000370314 WDR97A6NE52 1622 aa8.6□□□□□ -1.03
GABRA3-201ENST00000370314 URB2Q14146 1524 aaKnown RBP8.58□□□□□ -1.04
GABRA3-201ENST00000370314 CADPSQ9ULU8 1353 aa8.57□□□□□ -1.04
GABRA3-201ENST00000370314 KIF13AQ9H1H9 1805 aa8.56□□□□□ -1.04
GABRA3-201ENST00000370314 TARBP1Q13395 1621 aaKnown RBP8.55□□□□□ -1.04
GABRA3-201ENST00000370314 OSCARQ8IYS5 282 aa8.54□□□□□ -1.04
GABRA3-201ENST00000370314 BCANQ96GW7 911 aa8.54□□□□□ -1.04
GABRA3-201ENST00000370314 EIF4G3O43432 1585 aaKnown RBP8.54□□□□□ -1.04
GABRA3-201ENST00000370314 CFTRP13569 1480 aa8.53□□□□□ -1.04
GABRA3-201ENST00000370314 CEP164Q9UPV0 1460 aa8.53□□□□□ -1.04
GABRA3-201ENST00000370314 SLC4A1APQ9BWU0 796 aaKnown RBP8.52□□□□□ -1.05
GABRA3-201ENST00000370314 FAM9AQ8IZU1 332 aaPredicted RBP8.52□□□□□ -1.05
GABRA3-201ENST00000370314 GTF3C3Q9Y5Q9 886 aa8.5□□□□□ -1.05
GABRA3-201ENST00000370314 PLCB2Q00722 1185 aa8.49□□□□□ -1.05
GABRA3-201ENST00000370314 IFT140Q96RY7 1462 aa8.48□□□□□ -1.05
GABRA3-201ENST00000370314 FANCD2Q9BXW9 1451 aa8.47□□□□□ -1.05
GABRA3-201ENST00000370314 MROH2BQ7Z745 1585 aa8.46□□□□□ -1.05
GABRA3-201ENST00000370314 DCAF8L2P0C7V8 631 aa8.45□□□□□ -1.06
GABRA3-201ENST00000370314 HAP1P54257 671 aaPredicted RBP8.45□□□□□ -1.06
GABRA3-201ENST00000370314 ZBTB22O15209 634 aa8.45□□□□□ -1.06
GABRA3-201ENST00000370314 SHROOM2Q13796 1616 aa8.43□□□□□ -1.06
GABRA3-201ENST00000370314 ZNF608Q9ULD9 1512 aaPredicted RBP8.42□□□□□ -1.06
GABRA3-201ENST00000370314 ERCC6L2Q5T890 1561 aa8.41□□□□□ -1.06
GABRA3-201ENST00000370314 NPM2Q86SE8 214 aaKnown RBP8.39□□□□□ -1.07
GABRA3-201ENST00000370314 DNMBPQ6XZF7 1577 aa8.36□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms