RNA–Protein interactions for RNA: ENST00000370236.5

MRPL43-206, Transcript of mitochondrial ribosomal protein L43, humanhuman

APPRIS P1 TSL 2 BASIC

Gene MRPL43, Length 866 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL43-206ENST00000370236 NISCHQ9Y2I1 1504 aa35.65■■■■□ 3.3
MRPL43-206ENST00000370236 AEBP2Q6ZN18 517 aaPredicted RBP34.18■■■■□ 3.06
MRPL43-206ENST00000370236 CHIC1Q5VXU3 224 aa33.3■■■□□ 2.92
MRPL43-206ENST00000370236 CCDC180Q9P1Z9 1646 aa31.77■■■□□ 2.68
MRPL43-206ENST00000370236 ABCC9O60706 1549 aa30.86■■■□□ 2.53
MRPL43-206ENST00000370236 RB1CC1Q8TDY2 1594 aa29.77■■■□□ 2.36
MRPL43-206ENST00000370236 ZCCHC6Q5VYS8 1495 aaKnown RBP29.77■■■□□ 2.36
MRPL43-206ENST00000370236 NACADO15069 1562 aa29.73■■■□□ 2.35
MRPL43-206ENST00000370236 DCAF8L2P0C7V8 631 aa29.66■■■□□ 2.34
MRPL43-206ENST00000370236 MYO15BQ96JP2 1530 aa29.53■■■□□ 2.32
MRPL43-206ENST00000370236 DCAF1Q9Y4B6 1507 aa29.48■■■□□ 2.31
MRPL43-206ENST00000370236 PHF23Q9BUL5 403 aaPredicted RBP29.29■■■□□ 2.28
MRPL43-206ENST00000370236 UNC13AQ9UPW8 1703 aa29.27■■■□□ 2.28
MRPL43-206ENST00000370236 DNAJC5BQ9UF47 199 aa29.08■■■□□ 2.25
MRPL43-206ENST00000370236 SCRIBQ14160 1630 aa29.02■■■□□ 2.24
MRPL43-206ENST00000370236 SENP3Q9H4L4 574 aaPredicted RBP28.98■■■□□ 2.23
MRPL43-206ENST00000370236 BICRAQ9NZM4 1560 aa28.85■■■□□ 2.21
MRPL43-206ENST00000370236 PABPN1Q86U42 306 aaKnown RBP eCLIP28.77■■■□□ 2.2
MRPL43-206ENST00000370236 SHROOM4Q9ULL8 1493 aa28.52■■■□□ 2.16
MRPL43-206ENST00000370236 EIF4G1Q04637 1599 aaKnown RBP28.09■■■□□ 2.09
MRPL43-206ENST00000370236 CC2D2AQ9P2K1 1620 aa27.96■■■□□ 2.07
MRPL43-206ENST00000370236 CECR2Q9BXF3 1484 aa27.79■■■□□ 2.04
MRPL43-206ENST00000370236 SMARCA4P51532 1647 aa27.72■■■□□ 2.03
MRPL43-206ENST00000370236 BAZ1AQ9NRL2 1556 aaPredicted RBP27.67■■■□□ 2.02
MRPL43-206ENST00000370236 MROH2BQ7Z745 1585 aa27.5■■□□□ 1.99
MRPL43-206ENST00000370236 SMARCA2P51531 1590 aa27.46■■□□□ 1.99
MRPL43-206ENST00000370236 ATAD2BQ9ULI0 1458 aa27.43■■□□□ 1.98
MRPL43-206ENST00000370236 PEG3Q9GZU2 1588 aa27.39■■□□□ 1.97
MRPL43-206ENST00000370236 NCAPD3P42695 1498 aa27.34■■□□□ 1.97
MRPL43-206ENST00000370236 HMGXB3Q12766 1538 aa27.34■■□□□ 1.97
MRPL43-206ENST00000370236 WIZO95785 1651 aa27.3■■□□□ 1.96
MRPL43-206ENST00000370236 BAZ1BQ9UIG0 1483 aaKnown RBP27.27■■□□□ 1.96
MRPL43-206ENST00000370236 RSF1Q96T23 1441 aaPredicted RBP27.17■■□□□ 1.94
MRPL43-206ENST00000370236 PLPPR3Q6T4P5 718 aa26.98■■□□□ 1.91
MRPL43-206ENST00000370236 TOP2AP11388 1531 aaKnown RBP26.98■■□□□ 1.91
MRPL43-206ENST00000370236 DNAJC5Q9H3Z4 198 aa26.97■■□□□ 1.91
MRPL43-206ENST00000370236 FOXD1Q16676 465 aa26.93■■□□□ 1.9
MRPL43-206ENST00000370236 NESP48681 1621 aa26.75■■□□□ 1.87
MRPL43-206ENST00000370236 LAMC3Q9Y6N6 1575 aa26.72■■□□□ 1.87
MRPL43-206ENST00000370236 CUX2O14529 1486 aa26.7■■□□□ 1.87
MRPL43-206ENST00000370236 ERCC6Q03468 1493 aa26.66■■□□□ 1.86
MRPL43-206ENST00000370236 SUPT5HO00267 1087 aaKnown RBP26.6■■□□□ 1.85
MRPL43-206ENST00000370236 CCDC88BA6NC98 1476 aa26.58■■□□□ 1.85
MRPL43-206ENST00000370236 KIF21AQ7Z4S6 1674 aa26.57■■□□□ 1.84
MRPL43-206ENST00000370236 PRDM2Q13029 1718 aa26.55■■□□□ 1.84
MRPL43-206ENST00000370236 CADPSQ9ULU8 1353 aa26.55■■□□□ 1.84
MRPL43-206ENST00000370236 CFTRP13569 1480 aa26.46■■□□□ 1.83
MRPL43-206ENST00000370236 PDS5BQ9NTI5 1447 aa26.44■■□□□ 1.82
MRPL43-206ENST00000370236 THOC2Q8NI27 1593 aaKnown RBP26.39■■□□□ 1.82
MRPL43-206ENST00000370236 FANCD2Q9BXW9 1451 aa26.34■■□□□ 1.81
MRPL43-206ENST00000370236 CEP164Q9UPV0 1460 aa26.31■■□□□ 1.8
MRPL43-206ENST00000370236 MRC2Q9UBG0 1479 aa26.23■■□□□ 1.79
MRPL43-206ENST00000370236 WDR62O43379 1518 aa26.16■■□□□ 1.78
MRPL43-206ENST00000370236 URB2Q14146 1524 aaKnown RBP26.07■■□□□ 1.76
MRPL43-206ENST00000370236 DNMBPQ6XZF7 1577 aa25.96■■□□□ 1.75
MRPL43-206ENST00000370236 TOPBP1Q92547 1522 aa25.94■■□□□ 1.74
MRPL43-206ENST00000370236 ABCC8Q09428 1581 aa25.89■■□□□ 1.73
MRPL43-206ENST00000370236 PPP6R1Q9UPN7 881 aa25.86■■□□□ 1.73
MRPL43-206ENST00000370236 CUX1P39880 1505 aa25.81■■□□□ 1.72
MRPL43-206ENST00000370236 ADRA2BP18089 450 aa25.8■■□□□ 1.72
MRPL43-206ENST00000370236 POLA1P09884 1462 aaPredicted RBP25.72■■□□□ 1.71
MRPL43-206ENST00000370236 IFT140Q96RY7 1462 aa25.72■■□□□ 1.71
MRPL43-206ENST00000370236 FGD5Q6ZNL6 1462 aa25.71■■□□□ 1.71
MRPL43-206ENST00000370236 BIVM-ERCC5R4GMW8 1640 aa25.7■■□□□ 1.7
MRPL43-206ENST00000370236 TARBP1Q13395 1621 aaKnown RBP25.68■■□□□ 1.7
MRPL43-206ENST00000370236 TRIM41Q8WV44 630 aa25.68■■□□□ 1.7
MRPL43-206ENST00000370236 SYNJ1O43426 1573 aa25.68■■□□□ 1.7
MRPL43-206ENST00000370236 WRNQ14191 1432 aaPredicted RBP eCLIP25.66■■□□□ 1.7
MRPL43-206ENST00000370236 TOP2BQ02880 1626 aa25.65■■□□□ 1.7
MRPL43-206ENST00000370236 EIF4G3O43432 1585 aaKnown RBP25.62■■□□□ 1.69
MRPL43-206ENST00000370236 RAD54L2Q9Y4B4 1467 aa25.6■■□□□ 1.69
MRPL43-206ENST00000370236 WDR97A6NE52 1622 aa25.6■■□□□ 1.69
MRPL43-206ENST00000370236 ZNF608Q9ULD9 1512 aaPredicted RBP25.6■■□□□ 1.69
MRPL43-206ENST00000370236 SOGA1O94964 1423 aa25.55■■□□□ 1.68
MRPL43-206ENST00000370236 OSCARQ8IYS5 282 aa25.44■■□□□ 1.66
MRPL43-206ENST00000370236 AQRO60306 1485 aaKnown RBP eCLIP25.44■■□□□ 1.665e-8■■■■□ 19.3
MRPL43-206ENST00000370236 PBRM1Q86U86 1689 aa25.44■■□□□ 1.66
MRPL43-206ENST00000370236 ABCA10Q8WWZ4 1543 aa25.42■■□□□ 1.66
MRPL43-206ENST00000370236 ABCA5Q8WWZ7 1642 aa25.41■■□□□ 1.66
MRPL43-206ENST00000370236 TDRD9Q8NDG6 1382 aaKnown RBP25.4■■□□□ 1.66
MRPL43-206ENST00000370236 CHD1O14646 1710 aa25.34■■□□□ 1.65
MRPL43-206ENST00000370236 PIAS4Q8N2W9 510 aaPredicted RBP25.32■■□□□ 1.64
MRPL43-206ENST00000370236 GAPVD1Q14C86 1478 aa25.31■■□□□ 1.64
MRPL43-206ENST00000370236 GRIN2BQ13224 1484 aa25.28■■□□□ 1.64
MRPL43-206ENST00000370236 SNAPC4Q5SXM2 1469 aa25.28■■□□□ 1.64
MRPL43-206ENST00000370236 MAGI1Q96QZ7 1491 aaPredicted RBP25.22■■□□□ 1.63
MRPL43-206ENST00000370236 ADAMTS12P58397 1594 aa25.17■■□□□ 1.62
MRPL43-206ENST00000370236 ERICH3Q5RHP9 1530 aa25.14■■□□□ 1.62
MRPL43-206ENST00000370236 SYNJ2O15056 1496 aa25.11■■□□□ 1.61
MRPL43-206ENST00000370236 KIF27Q86VH2 1401 aa25.1■■□□□ 1.61
MRPL43-206ENST00000370236 RIMBP3CA6NJZ7 1639 aa25.09■■□□□ 1.61
MRPL43-206ENST00000370236 RIMBP3BA6NNM3 1639 aa25.09■■□□□ 1.61
MRPL43-206ENST00000370236 RIMBP3Q9UFD9 1639 aa25.09■■□□□ 1.61
MRPL43-206ENST00000370236 FBLN2P98095 1184 aa25.09■■□□□ 1.61
MRPL43-206ENST00000370236 CUL7Q14999 1698 aa25.04■■□□□ 1.6
MRPL43-206ENST00000370236 CHMP7Q8WUX9 453 aaPredicted RBP25.01■■□□□ 1.59
MRPL43-206ENST00000370236 FHAD1B1AJZ9 1412 aa25■■□□□ 1.59
MRPL43-206ENST00000370236 ARHGEF11O15085 1522 aa25■■□□□ 1.59
MRPL43-206ENST00000370236 GRIN2AQ12879 1464 aa24.99■■□□□ 1.59
MRPL43-206ENST00000370236 CLASP1Q7Z460 1538 aa24.93■■□□□ 1.58
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms