RNA–Protein interactions for RNA: ENST00000370228.1

TWNK-202, Transcript of twinkle mtDNA helicase, humanhuman

TSL 1 (best) BASIC

Gene TWNK, Length 3,175 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TWNK-202ENST00000370228 NISCHQ9Y2I1 1504 aa22.79■■□□□ 1.24
TWNK-202ENST00000370228 DCAF8L2P0C7V8 631 aa19.76■□□□□ 0.75
TWNK-202ENST00000370228 CCDC180Q9P1Z9 1646 aa19.73■□□□□ 0.75
TWNK-202ENST00000370228 ABCC9O60706 1549 aa19.7■□□□□ 0.74
TWNK-202ENST00000370228 PELP1Q8IZL8 1130 aaKnown RBP19.3■□□□□ 0.68
TWNK-202ENST00000370228 SHROOM4Q9ULL8 1493 aa19.01■□□□□ 0.63
TWNK-202ENST00000370228 ZCCHC6Q5VYS8 1495 aaKnown RBP19■□□□□ 0.63
TWNK-202ENST00000370228 MYT1Q01538 1121 aa18.93■□□□□ 0.62
TWNK-202ENST00000370228 PABPN1Q86U42 306 aaKnown RBP eCLIP18.71■□□□□ 0.59
TWNK-202ENST00000370228 RB1CC1Q8TDY2 1594 aa18.63■□□□□ 0.57
TWNK-202ENST00000370228 NACADO15069 1562 aa18.61■□□□□ 0.57
TWNK-202ENST00000370228 SCRIBQ14160 1630 aa18.61■□□□□ 0.57
TWNK-202ENST00000370228 DCAF1Q9Y4B6 1507 aa18.51■□□□□ 0.55
TWNK-202ENST00000370228 MYO15BQ96JP2 1530 aa18.37■□□□□ 0.53
TWNK-202ENST00000370228 UNC13AQ9UPW8 1703 aa18.25■□□□□ 0.51
TWNK-202ENST00000370228 TTBK1Q5TCY1 1321 aaPredicted RBP18.18■□□□□ 0.5
TWNK-202ENST00000370228 BICRAQ9NZM4 1560 aa18.14■□□□□ 0.49
TWNK-202ENST00000370228 HRCP23327 699 aa18.1■□□□□ 0.49
TWNK-202ENST00000370228 SUPT5HO00267 1087 aaKnown RBP18.1■□□□□ 0.49
TWNK-202ENST00000370228 CECR2Q9BXF3 1484 aa18■□□□□ 0.47
TWNK-202ENST00000370228 DNAJC5BQ9UF47 199 aa17.9■□□□□ 0.46
TWNK-202ENST00000370228 PRKCSHP14314 528 aaPredicted RBP17.81■□□□□ 0.44
TWNK-202ENST00000370228 SCAF1Q9H7N4 1312 aaKnown RBP17.78■□□□□ 0.44
TWNK-202ENST00000370228 MROH2BQ7Z745 1585 aa17.74■□□□□ 0.43
TWNK-202ENST00000370228 EIF4G1Q04637 1599 aaKnown RBP17.68■□□□□ 0.42
TWNK-202ENST00000370228 RSF1Q96T23 1441 aaPredicted RBP17.66■□□□□ 0.42
TWNK-202ENST00000370228 PPARGC1BQ86YN6 1023 aaKnown RBP17.59■□□□□ 0.41
TWNK-202ENST00000370228 SMARCA4P51532 1647 aa17.58■□□□□ 0.4
TWNK-202ENST00000370228 BAZ1AQ9NRL2 1556 aaPredicted RBP17.57■□□□□ 0.4
TWNK-202ENST00000370228 WIZO95785 1651 aa17.57■□□□□ 0.4
TWNK-202ENST00000370228 CC2D2AQ9P2K1 1620 aa17.57■□□□□ 0.4
TWNK-202ENST00000370228 BCL11AQ9H165 835 aa17.5■□□□□ 0.39
TWNK-202ENST00000370228 ATAD2BQ9ULI0 1458 aa17.47■□□□□ 0.39
TWNK-202ENST00000370228 BAZ1BQ9UIG0 1483 aaKnown RBP17.4■□□□□ 0.38
TWNK-202ENST00000370228 ERICH6Q7L0X2 663 aa17.36■□□□□ 0.37
TWNK-202ENST00000370228 APLP2Q06481 763 aa17.36■□□□□ 0.37
TWNK-202ENST00000370228 FAM9AQ8IZU1 332 aaPredicted RBP17.32■□□□□ 0.36
TWNK-202ENST00000370228 SMARCA2P51531 1590 aa17.3■□□□□ 0.36
TWNK-202ENST00000370228 NCAPD3P42695 1498 aa17.28■□□□□ 0.36
TWNK-202ENST00000370228 CCDC88BA6NC98 1476 aa17.19■□□□□ 0.34
TWNK-202ENST00000370228 TOP2AP11388 1531 aaKnown RBP17.18■□□□□ 0.34
TWNK-202ENST00000370228 PEG3Q9GZU2 1588 aa17.16■□□□□ 0.34
TWNK-202ENST00000370228 NESP48681 1621 aa17.15■□□□□ 0.34
TWNK-202ENST00000370228 HMGXB3Q12766 1538 aa17.11■□□□□ 0.33
TWNK-202ENST00000370228 PCGF6Q9BYE7 350 aa17.05■□□□□ 0.32
TWNK-202ENST00000370228 CENPBP07199 599 aaPredicted RBP17.02■□□□□ 0.31
TWNK-202ENST00000370228 ACIN1Q9UKV3 1341 aaKnown RBP16.97■□□□□ 0.31
TWNK-202ENST00000370228 CADPSQ9ULU8 1353 aa16.95■□□□□ 0.3
TWNK-202ENST00000370228 SLC24A1O60721 1099 aa16.95■□□□□ 0.3
TWNK-202ENST00000370228 EHMT2Q96KQ7 1210 aa16.9■□□□□ 0.3
TWNK-202ENST00000370228 ERCC6Q03468 1493 aa16.87■□□□□ 0.29
TWNK-202ENST00000370228 GTF3C3Q9Y5Q9 886 aa16.85■□□□□ 0.29
TWNK-202ENST00000370228 ABCC8Q09428 1581 aa16.85■□□□□ 0.29
TWNK-202ENST00000370228 NEUROD1Q13562 356 aa16.84■□□□□ 0.29
TWNK-202ENST00000370228 CFTRP13569 1480 aa16.84■□□□□ 0.29
TWNK-202ENST00000370228 CHIC1Q5VXU3 224 aa16.82■□□□□ 0.28
TWNK-202ENST00000370228 TRIM41Q8WV44 630 aa16.82■□□□□ 0.28
TWNK-202ENST00000370228 FANCD2Q9BXW9 1451 aa16.8■□□□□ 0.28
TWNK-202ENST00000370228 PDS5BQ9NTI5 1447 aa16.74■□□□□ 0.27
TWNK-202ENST00000370228 LAMC3Q9Y6N6 1575 aa16.69■□□□□ 0.26
TWNK-202ENST00000370228 KIF21AQ7Z4S6 1674 aa16.69■□□□□ 0.26
TWNK-202ENST00000370228 CEP164Q9UPV0 1460 aa16.69■□□□□ 0.26
TWNK-202ENST00000370228 ANP32EQ9BTT0 268 aa16.69■□□□□ 0.26
TWNK-202ENST00000370228 WRNQ14191 1432 aaPredicted RBP eCLIP16.65■□□□□ 0.26
TWNK-202ENST00000370228 ZEB1P37275 1124 aaPredicted RBP16.63■□□□□ 0.25
TWNK-202ENST00000370228 URB2Q14146 1524 aaKnown RBP16.6■□□□□ 0.25
TWNK-202ENST00000370228 SYNJ1O43426 1573 aa16.57■□□□□ 0.24
TWNK-202ENST00000370228 CUX1P39880 1505 aa16.57■□□□□ 0.24
TWNK-202ENST00000370228 RAD54L2Q9Y4B4 1467 aa16.56■□□□□ 0.24
TWNK-202ENST00000370228 CSRNP3Q8WYN3 585 aa16.53■□□□□ 0.24
TWNK-202ENST00000370228 TDRD9Q8NDG6 1382 aaKnown RBP16.53■□□□□ 0.24
TWNK-202ENST00000370228 TOPBP1Q92547 1522 aa16.52■□□□□ 0.23
TWNK-202ENST00000370228 MRC2Q9UBG0 1479 aa16.52■□□□□ 0.23
TWNK-202ENST00000370228 FGD5Q6ZNL6 1462 aa16.5■□□□□ 0.23
TWNK-202ENST00000370228 RANGAP1P46060 587 aaPredicted RBP16.49■□□□□ 0.23
TWNK-202ENST00000370228 SOGA1O94964 1423 aa16.48■□□□□ 0.23
TWNK-202ENST00000370228 FBLN2P98095 1184 aa16.47■□□□□ 0.23
TWNK-202ENST00000370228 RUSC2Q8N2Y8 1516 aa16.47■□□□□ 0.23
TWNK-202ENST00000370228 POLA1P09884 1462 aaPredicted RBP16.45■□□□□ 0.22
TWNK-202ENST00000370228 LOC105371045A0A1W2PR82 267 aa16.44■□□□□ 0.22
TWNK-202ENST00000370228 AQRO60306 1485 aaKnown RBP eCLIP16.43■□□□□ 0.228e-7■■■□□ 16.1
TWNK-202ENST00000370228 PRDM2Q13029 1718 aa16.42■□□□□ 0.22
TWNK-202ENST00000370228 ZNF608Q9ULD9 1512 aaPredicted RBP16.42■□□□□ 0.22
TWNK-202ENST00000370228 THOC2Q8NI27 1593 aaKnown RBP16.41■□□□□ 0.22
TWNK-202ENST00000370228 DNMBPQ6XZF7 1577 aa16.39■□□□□ 0.21
TWNK-202ENST00000370228 DAXXQ9UER7 740 aaPredicted RBP16.39■□□□□ 0.21
TWNK-202ENST00000370228 CUX2O14529 1486 aa16.39■□□□□ 0.21
TWNK-202ENST00000370228 TOP2BQ02880 1626 aa16.37■□□□□ 0.21
TWNK-202ENST00000370228 TRIM26Q12899 539 aaPredicted RBP16.35■□□□□ 0.21
TWNK-202ENST00000370228 WDR62O43379 1518 aa16.35■□□□□ 0.21
TWNK-202ENST00000370228 EIF5BO60841 1220 aaKnown RBP16.31■□□□□ 0.2
TWNK-202ENST00000370228 BIVM-ERCC5R4GMW8 1640 aa16.26■□□□□ 0.19
TWNK-202ENST00000370228 UBTFP17480 764 aaKnown RBP16.26■□□□□ 0.19
TWNK-202ENST00000370228 ANO8Q9HCE9 1232 aaPredicted RBP16.25■□□□□ 0.19
TWNK-202ENST00000370228 KIF27Q86VH2 1401 aa16.23■□□□□ 0.19
TWNK-202ENST00000370228 IFT140Q96RY7 1462 aa16.22■□□□□ 0.19
TWNK-202ENST00000370228 CHMP7Q8WUX9 453 aaPredicted RBP16.22■□□□□ 0.19
TWNK-202ENST00000370228 GAPVD1Q14C86 1478 aa16.21■□□□□ 0.19
TWNK-202ENST00000370228 UBE2Q2Q8WVN8 375 aa16.2■□□□□ 0.18
TWNK-202ENST00000370228 TARBP1Q13395 1621 aaKnown RBP16.19■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms