RNA–Protein interactions for RNA: ENST00000369747.7

UBE3D-203, Transcript of ubiquitin protein ligase E3D, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBE3D, Length 1,917 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3D-203ENST00000369747 NISCHQ9Y2I1 1504 aa39.92■■■■□ 3.98
UBE3D-203ENST00000369747 CCDC180Q9P1Z9 1646 aa35.04■■■■□ 3.2
UBE3D-203ENST00000369747 ABCC9O60706 1549 aa33.69■■■□□ 2.98
UBE3D-203ENST00000369747 ZCCHC6Q5VYS8 1495 aaKnown RBP33.42■■■□□ 2.94
UBE3D-203ENST00000369747 DCAF8L2P0C7V8 631 aa33.19■■■□□ 2.9
UBE3D-203ENST00000369747 DCAF1Q9Y4B6 1507 aa32.97■■■□□ 2.87
UBE3D-203ENST00000369747 MYO15BQ96JP2 1530 aa32.78■■■□□ 2.84
UBE3D-203ENST00000369747 NACADO15069 1562 aa32.77■■■□□ 2.84
UBE3D-203ENST00000369747 RB1CC1Q8TDY2 1594 aa32.62■■■□□ 2.81
UBE3D-203ENST00000369747 SHROOM4Q9ULL8 1493 aa32.22■■■□□ 2.75
UBE3D-203ENST00000369747 SCRIBQ14160 1630 aa32.19■■■□□ 2.74
UBE3D-203ENST00000369747 UNC13AQ9UPW8 1703 aa31.98■■■□□ 2.71
UBE3D-203ENST00000369747 BICRAQ9NZM4 1560 aa31.69■■■□□ 2.66
UBE3D-203ENST00000369747 PABPN1Q86U42 306 aaKnown RBP eCLIP31.67■■■□□ 2.66
UBE3D-203ENST00000369747 CECR2Q9BXF3 1484 aa31.1■■■□□ 2.57
UBE3D-203ENST00000369747 BAZ1AQ9NRL2 1556 aaPredicted RBP30.85■■■□□ 2.53
UBE3D-203ENST00000369747 MROH2BQ7Z745 1585 aa30.84■■■□□ 2.53
UBE3D-203ENST00000369747 SMARCA4P51532 1647 aa30.8■■■□□ 2.52
UBE3D-203ENST00000369747 RSF1Q96T23 1441 aaPredicted RBP30.77■■■□□ 2.52
UBE3D-203ENST00000369747 EIF4G1Q04637 1599 aaKnown RBP30.77■■■□□ 2.52
UBE3D-203ENST00000369747 SUPT5HO00267 1087 aaKnown RBP30.73■■■□□ 2.51
UBE3D-203ENST00000369747 WIZO95785 1651 aa30.56■■■□□ 2.48
UBE3D-203ENST00000369747 CC2D2AQ9P2K1 1620 aa30.46■■■□□ 2.47
UBE3D-203ENST00000369747 ATAD2BQ9ULI0 1458 aa30.44■■■□□ 2.46
UBE3D-203ENST00000369747 PEG3Q9GZU2 1588 aa30.44■■■□□ 2.46
UBE3D-203ENST00000369747 SMARCA2P51531 1590 aa30.38■■■□□ 2.45
UBE3D-203ENST00000369747 NCAPD3P42695 1498 aa30.26■■■□□ 2.44
UBE3D-203ENST00000369747 DNAJC5BQ9UF47 199 aa30.26■■■□□ 2.43
UBE3D-203ENST00000369747 BAZ1BQ9UIG0 1483 aaKnown RBP30.23■■■□□ 2.43
UBE3D-203ENST00000369747 TOP2AP11388 1531 aaKnown RBP30.2■■■□□ 2.42
UBE3D-203ENST00000369747 HMGXB3Q12766 1538 aa30.16■■■□□ 2.42
UBE3D-203ENST00000369747 CCDC88BA6NC98 1476 aa29.9■■■□□ 2.38
UBE3D-203ENST00000369747 CADPSQ9ULU8 1353 aa29.46■■■□□ 2.31
UBE3D-203ENST00000369747 CFTRP13569 1480 aa29.45■■■□□ 2.3
UBE3D-203ENST00000369747 NESP48681 1621 aa29.41■■■□□ 2.3
UBE3D-203ENST00000369747 LAMC3Q9Y6N6 1575 aa29.31■■■□□ 2.28
UBE3D-203ENST00000369747 PRDM2Q13029 1718 aa29.23■■■□□ 2.27
UBE3D-203ENST00000369747 CHIC1Q5VXU3 224 aa29.22■■■□□ 2.27
UBE3D-203ENST00000369747 FANCD2Q9BXW9 1451 aa29.13■■■□□ 2.25
UBE3D-203ENST00000369747 ABCC8Q09428 1581 aa29.12■■■□□ 2.25
UBE3D-203ENST00000369747 PDS5BQ9NTI5 1447 aa29.1■■■□□ 2.25
UBE3D-203ENST00000369747 KIF21AQ7Z4S6 1674 aa29.04■■■□□ 2.24
UBE3D-203ENST00000369747 CEP164Q9UPV0 1460 aa28.99■■■□□ 2.23
UBE3D-203ENST00000369747 WRNQ14191 1432 aaPredicted RBP eCLIP28.97■■■□□ 2.23
UBE3D-203ENST00000369747 ERCC6Q03468 1493 aa28.91■■■□□ 2.22
UBE3D-203ENST00000369747 TRIM41Q8WV44 630 aa28.9■■■□□ 2.22
UBE3D-203ENST00000369747 SYNJ1O43426 1573 aa28.89■■■□□ 2.22
UBE3D-203ENST00000369747 CUX1P39880 1505 aa28.87■■■□□ 2.21
UBE3D-203ENST00000369747 URB2Q14146 1524 aaKnown RBP28.81■■■□□ 2.2
UBE3D-203ENST00000369747 TOP2BQ02880 1626 aa28.79■■■□□ 2.2
UBE3D-203ENST00000369747 BIVM-ERCC5R4GMW8 1640 aa28.76■■■□□ 2.19
UBE3D-203ENST00000369747 MRC2Q9UBG0 1479 aa28.76■■■□□ 2.19
UBE3D-203ENST00000369747 TOPBP1Q92547 1522 aa28.76■■■□□ 2.19
UBE3D-203ENST00000369747 DNMBPQ6XZF7 1577 aa28.75■■■□□ 2.19
UBE3D-203ENST00000369747 THOC2Q8NI27 1593 aaKnown RBP28.69■■■□□ 2.18
UBE3D-203ENST00000369747 WDR62O43379 1518 aa28.64■■■□□ 2.18
UBE3D-203ENST00000369747 FGD5Q6ZNL6 1462 aa28.63■■■□□ 2.17
UBE3D-203ENST00000369747 POLA1P09884 1462 aaPredicted RBP28.59■■■□□ 2.17
UBE3D-203ENST00000369747 RAD54L2Q9Y4B4 1467 aa28.5■■■□□ 2.15
UBE3D-203ENST00000369747 SOGA1O94964 1423 aa28.47■■■□□ 2.15
UBE3D-203ENST00000369747 CUX2O14529 1486 aa28.46■■■□□ 2.15
UBE3D-203ENST00000369747 RUSC2Q8N2Y8 1516 aa28.4■■■□□ 2.14
UBE3D-203ENST00000369747 FAM9AQ8IZU1 332 aaPredicted RBP28.39■■■□□ 2.13
UBE3D-203ENST00000369747 TARBP1Q13395 1621 aaKnown RBP28.38■■■□□ 2.13
UBE3D-203ENST00000369747 ABCA10Q8WWZ4 1543 aa28.35■■■□□ 2.13
UBE3D-203ENST00000369747 IFT140Q96RY7 1462 aa28.32■■■□□ 2.12
UBE3D-203ENST00000369747 WDR97A6NE52 1622 aa28.31■■■□□ 2.12
UBE3D-203ENST00000369747 TDRD9Q8NDG6 1382 aaKnown RBP28.28■■■□□ 2.12
UBE3D-203ENST00000369747 KIF27Q86VH2 1401 aa28.27■■■□□ 2.12
UBE3D-203ENST00000369747 ZNF608Q9ULD9 1512 aaPredicted RBP28.24■■■□□ 2.11
UBE3D-203ENST00000369747 EEA1Q15075 1411 aa28.2■■■□□ 2.11
UBE3D-203ENST00000369747 AQRO60306 1485 aaKnown RBP eCLIP28.19■■■□□ 2.1
UBE3D-203ENST00000369747 ABCA5Q8WWZ7 1642 aa28.18■■■□□ 2.1
UBE3D-203ENST00000369747 LOC105371045A0A1W2PR82 267 aa28.17■■■□□ 2.1
UBE3D-203ENST00000369747 CSRNP3Q8WYN3 585 aa28.16■■■□□ 2.1
UBE3D-203ENST00000369747 GAPVD1Q14C86 1478 aa28.15■■■□□ 2.1
UBE3D-203ENST00000369747 EIF4G3O43432 1585 aaKnown RBP28.11■■■□□ 2.09
UBE3D-203ENST00000369747 IGF1RP08069 1367 aa28.1■■■□□ 2.09
UBE3D-203ENST00000369747 EHMT2Q96KQ7 1210 aa28.04■■■□□ 2.08
UBE3D-203ENST00000369747 PBRM1Q86U86 1689 aa28.02■■■□□ 2.08
UBE3D-203ENST00000369747 ERICH3Q5RHP9 1530 aa28■■■□□ 2.07
UBE3D-203ENST00000369747 GRIN2BQ13224 1484 aa28■■■□□ 2.07
UBE3D-203ENST00000369747 PRXQ9BXM0 1461 aa27.96■■■□□ 2.07
UBE3D-203ENST00000369747 CARMIL1Q5VZK9 1371 aa27.94■■■□□ 2.06
UBE3D-203ENST00000369747 KIF21BO75037 1637 aa27.9■■■□□ 2.06
UBE3D-203ENST00000369747 SNAPC4Q5SXM2 1469 aa27.89■■■□□ 2.06
UBE3D-203ENST00000369747 RAPGEF2Q9Y4G8 1499 aa27.89■■■□□ 2.06
UBE3D-203ENST00000369747 CUL7Q14999 1698 aa27.89■■■□□ 2.06
UBE3D-203ENST00000369747 ADAMTS12P58397 1594 aa27.84■■■□□ 2.05
UBE3D-203ENST00000369747 GOLGA3Q08378 1498 aa27.82■■■□□ 2.04
UBE3D-203ENST00000369747 MAGI1Q96QZ7 1491 aaPredicted RBP27.82■■■□□ 2.04
UBE3D-203ENST00000369747 FHAD1B1AJZ9 1412 aa27.82■■■□□ 2.04
UBE3D-203ENST00000369747 UBTFP17480 764 aaKnown RBP27.76■■■□□ 2.03
UBE3D-203ENST00000369747 SYNJ2O15056 1496 aa27.73■■■□□ 2.03
UBE3D-203ENST00000369747 FBLN2P98095 1184 aa27.73■■■□□ 2.03
UBE3D-203ENST00000369747 CHMP7Q8WUX9 453 aaPredicted RBP27.71■■■□□ 2.03
UBE3D-203ENST00000369747 GRIN2AQ12879 1464 aa27.67■■■□□ 2.02
UBE3D-203ENST00000369747 TNIKQ9UKE5 1360 aa27.63■■■□□ 2.01
UBE3D-203ENST00000369747 CHD1O14646 1710 aa27.6■■■□□ 2.01
UBE3D-203ENST00000369747 CEP170Q5SW79 1584 aa27.52■■■□□ 2
Retrieved 100 of 20,778 RNA–protein pairs in 11.8 ms