RNA–Protein interactions for RNA: ENST00000369067.7

RPRD2-201, Transcript of regulation of nuclear pre-mRNA domain containing 2, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene RPRD2, Length 1,043 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPRD2-201ENST00000369067 NISCHQ9Y2I1 1504 aa33.12■■■□□ 2.89
RPRD2-201ENST00000369067 CCDC180Q9P1Z9 1646 aa29.44■■■□□ 2.3
RPRD2-201ENST00000369067 ABCC9O60706 1549 aa28.97■■■□□ 2.23
RPRD2-201ENST00000369067 RB1CC1Q8TDY2 1594 aa27.76■■■□□ 2.03
RPRD2-201ENST00000369067 DCAF8L2P0C7V8 631 aa27.75■■■□□ 2.03
RPRD2-201ENST00000369067 NACADO15069 1562 aa27.71■■■□□ 2.03
RPRD2-201ENST00000369067 ZCCHC6Q5VYS8 1495 aaKnown RBP27.55■■■□□ 2
RPRD2-201ENST00000369067 MYO15BQ96JP2 1530 aa27.5■■□□□ 1.99
RPRD2-201ENST00000369067 DCAF1Q9Y4B6 1507 aa27.36■■□□□ 1.97
RPRD2-201ENST00000369067 UNC13AQ9UPW8 1703 aa27.22■■□□□ 1.95
RPRD2-201ENST00000369067 PABPN1Q86U42 306 aaKnown RBP eCLIP27.1■■□□□ 1.93
RPRD2-201ENST00000369067 BICRAQ9NZM4 1560 aa27.01■■□□□ 1.91
RPRD2-201ENST00000369067 SCRIBQ14160 1630 aa26.9■■□□□ 1.9
RPRD2-201ENST00000369067 DNAJC5BQ9UF47 199 aa26.78■■□□□ 1.88
RPRD2-201ENST00000369067 SHROOM4Q9ULL8 1493 aa26.57■■□□□ 1.84
RPRD2-201ENST00000369067 EIF4G1Q04637 1599 aaKnown RBP26.26■■□□□ 1.79
RPRD2-201ENST00000369067 CC2D2AQ9P2K1 1620 aa26.19■■□□□ 1.78
RPRD2-201ENST00000369067 CECR2Q9BXF3 1484 aa26.02■■□□□ 1.76
RPRD2-201ENST00000369067 SMARCA4P51532 1647 aa25.71■■□□□ 1.71
RPRD2-201ENST00000369067 BAZ1AQ9NRL2 1556 aaPredicted RBP25.64■■□□□ 1.69
RPRD2-201ENST00000369067 ATAD2BQ9ULI0 1458 aa25.61■■□□□ 1.69
RPRD2-201ENST00000369067 NCAPD3P42695 1498 aa25.6■■□□□ 1.69
RPRD2-201ENST00000369067 MROH2BQ7Z745 1585 aa25.56■■□□□ 1.68
RPRD2-201ENST00000369067 SMARCA2P51531 1590 aa25.52■■□□□ 1.68
RPRD2-201ENST00000369067 PEG3Q9GZU2 1588 aa25.45■■□□□ 1.66
RPRD2-201ENST00000369067 HMGXB3Q12766 1538 aa25.42■■□□□ 1.66
RPRD2-201ENST00000369067 BAZ1BQ9UIG0 1483 aaKnown RBP25.36■■□□□ 1.65
RPRD2-201ENST00000369067 WIZO95785 1651 aa25.28■■□□□ 1.64
RPRD2-201ENST00000369067 RSF1Q96T23 1441 aaPredicted RBP25.22■■□□□ 1.63
RPRD2-201ENST00000369067 AEBP2Q6ZN18 517 aaPredicted RBP25.18■■□□□ 1.62
RPRD2-201ENST00000369067 NESP48681 1621 aa25.07■■□□□ 1.6
RPRD2-201ENST00000369067 TOP2AP11388 1531 aaKnown RBP24.95■■□□□ 1.58
RPRD2-201ENST00000369067 ERCC6Q03468 1493 aa24.91■■□□□ 1.58
RPRD2-201ENST00000369067 LAMC3Q9Y6N6 1575 aa24.91■■□□□ 1.58
RPRD2-201ENST00000369067 CADPSQ9ULU8 1353 aa24.85■■□□□ 1.57
RPRD2-201ENST00000369067 KIF21AQ7Z4S6 1674 aa24.75■■□□□ 1.55
RPRD2-201ENST00000369067 PDS5BQ9NTI5 1447 aa24.74■■□□□ 1.55
RPRD2-201ENST00000369067 CCDC88BA6NC98 1476 aa24.71■■□□□ 1.55
RPRD2-201ENST00000369067 CUX2O14529 1486 aa24.68■■□□□ 1.54
RPRD2-201ENST00000369067 CFTRP13569 1480 aa24.68■■□□□ 1.54
RPRD2-201ENST00000369067 THOC2Q8NI27 1593 aaKnown RBP24.67■■□□□ 1.54
RPRD2-201ENST00000369067 FANCD2Q9BXW9 1451 aa24.56■■□□□ 1.52
RPRD2-201ENST00000369067 SUPT5HO00267 1087 aaKnown RBP24.52■■□□□ 1.52
RPRD2-201ENST00000369067 MRC2Q9UBG0 1479 aa24.51■■□□□ 1.51
RPRD2-201ENST00000369067 CEP164Q9UPV0 1460 aa24.51■■□□□ 1.51
RPRD2-201ENST00000369067 PRDM2Q13029 1718 aa24.47■■□□□ 1.51
RPRD2-201ENST00000369067 WDR62O43379 1518 aa24.43■■□□□ 1.5
RPRD2-201ENST00000369067 URB2Q14146 1524 aaKnown RBP24.35■■□□□ 1.49
RPRD2-201ENST00000369067 TOPBP1Q92547 1522 aa24.16■■□□□ 1.46
RPRD2-201ENST00000369067 CHIC1Q5VXU3 224 aa24.13■■□□□ 1.45
RPRD2-201ENST00000369067 DNAJC5Q9H3Z4 198 aa24.13■■□□□ 1.45
RPRD2-201ENST00000369067 DNMBPQ6XZF7 1577 aa24.11■■□□□ 1.45
RPRD2-201ENST00000369067 ABCC8Q09428 1581 aa24.1■■□□□ 1.45
RPRD2-201ENST00000369067 IFT140Q96RY7 1462 aa24■■□□□ 1.43
RPRD2-201ENST00000369067 ZNF608Q9ULD9 1512 aaPredicted RBP23.98■■□□□ 1.43
RPRD2-201ENST00000369067 CUX1P39880 1505 aa23.97■■□□□ 1.43
RPRD2-201ENST00000369067 POLA1P09884 1462 aaPredicted RBP23.95■■□□□ 1.42
RPRD2-201ENST00000369067 TARBP1Q13395 1621 aaKnown RBP23.93■■□□□ 1.42
RPRD2-201ENST00000369067 RAD54L2Q9Y4B4 1467 aa23.89■■□□□ 1.42
RPRD2-201ENST00000369067 FGD5Q6ZNL6 1462 aa23.88■■□□□ 1.41
RPRD2-201ENST00000369067 SOGA1O94964 1423 aa23.85■■□□□ 1.41
RPRD2-201ENST00000369067 EIF4G3O43432 1585 aaKnown RBP23.82■■□□□ 1.4
RPRD2-201ENST00000369067 AQRO60306 1485 aaKnown RBP eCLIP23.82■■□□□ 1.4
RPRD2-201ENST00000369067 TDRD9Q8NDG6 1382 aaKnown RBP23.77■■□□□ 1.4
RPRD2-201ENST00000369067 WRNQ14191 1432 aaPredicted RBP eCLIP23.74■■□□□ 1.39
RPRD2-201ENST00000369067 SYNJ1O43426 1573 aa23.73■■□□□ 1.39
RPRD2-201ENST00000369067 TOP2BQ02880 1626 aa23.7■■□□□ 1.39
RPRD2-201ENST00000369067 BIVM-ERCC5R4GMW8 1640 aa23.7■■□□□ 1.39
RPRD2-201ENST00000369067 OSCARQ8IYS5 282 aa23.69■■□□□ 1.38
RPRD2-201ENST00000369067 WDR97A6NE52 1622 aa23.69■■□□□ 1.38
RPRD2-201ENST00000369067 ABCA10Q8WWZ4 1543 aa23.64■■□□□ 1.37
RPRD2-201ENST00000369067 CHD1O14646 1710 aa23.57■■□□□ 1.36
RPRD2-201ENST00000369067 GRIN2BQ13224 1484 aa23.56■■□□□ 1.36
RPRD2-201ENST00000369067 GAPVD1Q14C86 1478 aa23.56■■□□□ 1.36
RPRD2-201ENST00000369067 SNAPC4Q5SXM2 1469 aa23.56■■□□□ 1.36
RPRD2-201ENST00000369067 ABCA5Q8WWZ7 1642 aa23.55■■□□□ 1.36
RPRD2-201ENST00000369067 FBLN2P98095 1184 aa23.53■■□□□ 1.36
RPRD2-201ENST00000369067 PBRM1Q86U86 1689 aa23.53■■□□□ 1.36
RPRD2-201ENST00000369067 MAGI1Q96QZ7 1491 aaPredicted RBP23.49■■□□□ 1.35
RPRD2-201ENST00000369067 CHMP7Q8WUX9 453 aaPredicted RBP23.44■■□□□ 1.34
RPRD2-201ENST00000369067 SYNJ2O15056 1496 aa23.42■■□□□ 1.34
RPRD2-201ENST00000369067 RIMBP3CA6NJZ7 1639 aa23.33■■□□□ 1.33
RPRD2-201ENST00000369067 RIMBP3BA6NNM3 1639 aa23.33■■□□□ 1.33
RPRD2-201ENST00000369067 RIMBP3Q9UFD9 1639 aa23.33■■□□□ 1.33
RPRD2-201ENST00000369067 ERICH3Q5RHP9 1530 aa23.33■■□□□ 1.32
RPRD2-201ENST00000369067 ADAMTS12P58397 1594 aa23.32■■□□□ 1.32
RPRD2-201ENST00000369067 ARHGEF11O15085 1522 aa23.3■■□□□ 1.32
RPRD2-201ENST00000369067 CLASP1Q7Z460 1538 aa23.3■■□□□ 1.32
RPRD2-201ENST00000369067 TRIM41Q8WV44 630 aa23.29■■□□□ 1.32
RPRD2-201ENST00000369067 FHAD1B1AJZ9 1412 aa23.28■■□□□ 1.32
RPRD2-201ENST00000369067 GRIN2AQ12879 1464 aa23.27■■□□□ 1.32
RPRD2-201ENST00000369067 KIF27Q86VH2 1401 aa23.24■■□□□ 1.31
RPRD2-201ENST00000369067 IGF1RP08069 1367 aa23.23■■□□□ 1.31
RPRD2-201ENST00000369067 CEP170Q5SW79 1584 aa23.18■■□□□ 1.3
RPRD2-201ENST00000369067 NUP160Q12769 1436 aa23.18■■□□□ 1.3
RPRD2-201ENST00000369067 CYB5RLQ6IPT4 315 aa23.13■■□□□ 1.29
RPRD2-201ENST00000369067 ARAP1Q96P48 1450 aa23.12■■□□□ 1.29
RPRD2-201ENST00000369067 RUSC2Q8N2Y8 1516 aa23.11■■□□□ 1.29
RPRD2-201ENST00000369067 CUL7Q14999 1698 aa23.08■■□□□ 1.29
RPRD2-201ENST00000369067 CARMIL1Q5VZK9 1371 aa23.05■■□□□ 1.28
Retrieved 100 of 20,778 RNA–protein pairs in 67 ms