RNA–Protein interactions for RNA: ENST00000369037.8

PDSS2-202, Transcript of decaprenyl diphosphate synthase subunit 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDSS2, Length 3,540 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDSS2-202ENST00000369037 NISCHQ9Y2I1 1504 aa19.89■□□□□ 0.77
PDSS2-202ENST00000369037 PELP1Q8IZL8 1130 aaKnown RBP18.5■□□□□ 0.55
PDSS2-202ENST00000369037 MYT1Q01538 1121 aa18.06■□□□□ 0.48
PDSS2-202ENST00000369037 HRCP23327 699 aa17.92■□□□□ 0.46
PDSS2-202ENST00000369037 DCAF8L2P0C7V8 631 aa17.59■□□□□ 0.41
PDSS2-202ENST00000369037 PPARGC1BQ86YN6 1023 aaKnown RBP17.44■□□□□ 0.38
PDSS2-202ENST00000369037 SCAF1Q9H7N4 1312 aaKnown RBP17.28■□□□□ 0.36
PDSS2-202ENST00000369037 ABCC9O60706 1549 aa17.25■□□□□ 0.35
PDSS2-202ENST00000369037 PCGF6Q9BYE7 350 aa17.22■□□□□ 0.35
PDSS2-202ENST00000369037 TTBK1Q5TCY1 1321 aaPredicted RBP17.13■□□□□ 0.33
PDSS2-202ENST00000369037 CCDC180Q9P1Z9 1646 aa17.1■□□□□ 0.33
PDSS2-202ENST00000369037 SHROOM4Q9ULL8 1493 aa16.83■□□□□ 0.28
PDSS2-202ENST00000369037 ACIN1Q9UKV3 1341 aaKnown RBP16.73■□□□□ 0.27
PDSS2-202ENST00000369037 ZEB1P37275 1124 aaPredicted RBP16.71■□□□□ 0.27
PDSS2-202ENST00000369037 GTF3C3Q9Y5Q9 886 aa16.62■□□□□ 0.25
PDSS2-202ENST00000369037 BCL11AQ9H165 835 aa16.62■□□□□ 0.25
PDSS2-202ENST00000369037 CENPBP07199 599 aaPredicted RBP16.6■□□□□ 0.25
PDSS2-202ENST00000369037 NEUROD1Q13562 356 aa16.59■□□□□ 0.25
PDSS2-202ENST00000369037 MYO15BQ96JP2 1530 aa16.57■□□□□ 0.24
PDSS2-202ENST00000369037 SUPT5HO00267 1087 aaKnown RBP16.57■□□□□ 0.24
PDSS2-202ENST00000369037 ZCCHC6Q5VYS8 1495 aaKnown RBP16.56■□□□□ 0.24
PDSS2-202ENST00000369037 TRIM26Q12899 539 aaPredicted RBP16.51■□□□□ 0.23
PDSS2-202ENST00000369037 PABPN1Q86U42 306 aaKnown RBP eCLIP16.48■□□□□ 0.23
PDSS2-202ENST00000369037 PRKCSHP14314 528 aaPredicted RBP16.46■□□□□ 0.23
PDSS2-202ENST00000369037 DCAF1Q9Y4B6 1507 aa16.45■□□□□ 0.22
PDSS2-202ENST00000369037 FAM9AQ8IZU1 332 aaPredicted RBP16.41■□□□□ 0.22
PDSS2-202ENST00000369037 CHIC1Q5VXU3 224 aa16.37■□□□□ 0.21
PDSS2-202ENST00000369037 ERICH6Q7L0X2 663 aa16.28■□□□□ 0.2
PDSS2-202ENST00000369037 SCRIBQ14160 1630 aa16.25■□□□□ 0.19
PDSS2-202ENST00000369037 RB1CC1Q8TDY2 1594 aa16.24■□□□□ 0.19
PDSS2-202ENST00000369037 NACADO15069 1562 aa16.22■□□□□ 0.19
PDSS2-202ENST00000369037 ANP32EQ9BTT0 268 aa16.19■□□□□ 0.18
PDSS2-202ENST00000369037 DIEXFQ68CQ4 756 aaKnown RBP16.08■□□□□ 0.17
PDSS2-202ENST00000369037 LOC105371045A0A1W2PR82 267 aa16.06■□□□□ 0.16
PDSS2-202ENST00000369037 CSRNP3Q8WYN3 585 aa15.98■□□□□ 0.15
PDSS2-202ENST00000369037 APLP2Q06481 763 aa15.97■□□□□ 0.15
PDSS2-202ENST00000369037 YTHDC1Q96MU7 727 aaKnown RBP15.91■□□□□ 0.14
PDSS2-202ENST00000369037 EHMT2Q96KQ7 1210 aa15.84■□□□□ 0.13
PDSS2-202ENST00000369037 CCER1Q8TC90 406 aaPredicted RBP15.78■□□□□ 0.12
PDSS2-202ENST00000369037 TSHZ2Q9NRE2 1034 aa15.74■□□□□ 0.11
PDSS2-202ENST00000369037 CECR2Q9BXF3 1484 aa15.73■□□□□ 0.11
PDSS2-202ENST00000369037 CLSPNQ9HAW4 1339 aa15.7■□□□□ 0.1
PDSS2-202ENST00000369037 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.7■□□□□ 0.1
PDSS2-202ENST00000369037 BICRAQ9NZM4 1560 aa15.69■□□□□ 0.1
PDSS2-202ENST00000369037 UNC13AQ9UPW8 1703 aa15.68■□□□□ 0.1
PDSS2-202ENST00000369037 TRIM41Q8WV44 630 aa15.67■□□□□ 0.1
PDSS2-202ENST00000369037 SUPT16HQ9Y5B9 1047 aaKnown RBP15.63■□□□□ 0.09
PDSS2-202ENST00000369037 ZNF316A6NFI3 1004 aaPredicted RBP15.61■□□□□ 0.09
PDSS2-202ENST00000369037 DNAJC5BQ9UF47 199 aa15.6■□□□□ 0.09
PDSS2-202ENST00000369037 MIER1Q8N108 512 aa15.55■□□□□ 0.08
PDSS2-202ENST00000369037 MROH2BQ7Z745 1585 aa15.49■□□□□ 0.07
PDSS2-202ENST00000369037 ANO8Q9HCE9 1232 aaPredicted RBP15.47■□□□□ 0.07
PDSS2-202ENST00000369037 RSF1Q96T23 1441 aaPredicted RBP15.47■□□□□ 0.07
PDSS2-202ENST00000369037 MYT1LQ9UL68 1186 aa15.38■□□□□ 0.05
PDSS2-202ENST00000369037 EIF4G1Q04637 1599 aaKnown RBP15.38■□□□□ 0.05
PDSS2-202ENST00000369037 BAZ1AQ9NRL2 1556 aaPredicted RBP15.36■□□□□ 0.05
PDSS2-202ENST00000369037 RBM19Q9Y4C8 960 aaKnown RBP15.34■□□□□ 0.05
PDSS2-202ENST00000369037 WIZO95785 1651 aa15.3■□□□□ 0.04
PDSS2-202ENST00000369037 SMARCA4P51532 1647 aa15.29■□□□□ 0.04
PDSS2-202ENST00000369037 UBE2Q2Q8WVN8 375 aa15.29■□□□□ 0.04
PDSS2-202ENST00000369037 CC2D2AQ9P2K1 1620 aa15.26■□□□□ 0.03
PDSS2-202ENST00000369037 ATAD2BQ9ULI0 1458 aa15.26■□□□□ 0.03
PDSS2-202ENST00000369037 BAZ1BQ9UIG0 1483 aaKnown RBP15.25■□□□□ 0.03
PDSS2-202ENST00000369037 DEKP35659 375 aaKnown RBP15.25■□□□□ 0.03
PDSS2-202ENST00000369037 BCANQ96GW7 911 aa15.25■□□□□ 0.03
PDSS2-202ENST00000369037 SALL2Q9Y467 1007 aaPredicted RBP15.23■□□□□ 0.03
PDSS2-202ENST00000369037 ERICH6BQ5W0A0 696 aa15.22■□□□□ 0.03
PDSS2-202ENST00000369037 MSH5O43196 834 aa15.19■□□□□ 0.02
PDSS2-202ENST00000369037 CCDC136Q96JN2 1154 aa15.17■□□□□ 0.02
PDSS2-202ENST00000369037 EIF5BO60841 1220 aaKnown RBP15.16■□□□□ 0.02
PDSS2-202ENST00000369037 FKBP8Q14318 412 aa15.12■□□□□ 0.01
PDSS2-202ENST00000369037 SMARCA2P51531 1590 aa15.12■□□□□ 0.01
PDSS2-202ENST00000369037 SLC24A1O60721 1099 aa15.11■□□□□ 0.01
PDSS2-202ENST00000369037 NEFLP07196 543 aa15.09■□□□□ 0.01
PDSS2-202ENST00000369037 FANCIQ9NVI1 1328 aa15.09■□□□□ 0.01
PDSS2-202ENST00000369037 NCAPD3P42695 1498 aa15.08■□□□□ 0
PDSS2-202ENST00000369037 CCDC88BA6NC98 1476 aa15.05■□□□□ -0
PDSS2-202ENST00000369037 RANGAP1P46060 587 aaPredicted RBP15.03■□□□□ -0
PDSS2-202ENST00000369037 ZBTB4Q9P1Z0 1013 aaPredicted RBP15.01□□□□□ -0.01
PDSS2-202ENST00000369037 TOP2AP11388 1531 aaKnown RBP14.99□□□□□ -0.01
PDSS2-202ENST00000369037 ITGAEP38570 1179 aa14.98□□□□□ -0.01
PDSS2-202ENST00000369037 NESP48681 1621 aa14.96□□□□□ -0.01
PDSS2-202ENST00000369037 PKNOX2Q96KN3 472 aa14.96□□□□□ -0.01
PDSS2-202ENST00000369037 CDK11AQ9UQ88 783 aaPredicted RBP14.93□□□□□ -0.02
PDSS2-202ENST00000369037 RTN4Q9NQC3 1192 aaKnown RBP14.9□□□□□ -0.02
PDSS2-202ENST00000369037 NBR1Q14596 966 aa14.89□□□□□ -0.03
PDSS2-202ENST00000369037 HMGXB3Q12766 1538 aa14.88□□□□□ -0.03
PDSS2-202ENST00000369037 IL27Q8NEV9 243 aa14.87□□□□□ -0.03
PDSS2-202ENST00000369037 PEG3Q9GZU2 1588 aa14.87□□□□□ -0.03
PDSS2-202ENST00000369037 CADPSQ9ULU8 1353 aa14.87□□□□□ -0.03
PDSS2-202ENST00000369037 RTL5Q5HYW3 569 aaPredicted RBP14.86□□□□□ -0.03
PDSS2-202ENST00000369037 DAXXQ9UER7 740 aaPredicted RBP14.84□□□□□ -0.03
PDSS2-202ENST00000369037 ERCC6Q03468 1493 aa14.84□□□□□ -0.03
PDSS2-202ENST00000369037 NOP58Q9Y2X3 529 aaKnown RBP14.79□□□□□ -0.04
PDSS2-202ENST00000369037 PODXL2Q9NZ53 605 aa14.75□□□□□ -0.05
PDSS2-202ENST00000369037 PLEKHG5O94827 1062 aa14.75□□□□□ -0.05
PDSS2-202ENST00000369037 ABCC8Q09428 1581 aa14.74□□□□□ -0.05
PDSS2-202ENST00000369037 UBTFP17480 764 aaKnown RBP14.74□□□□□ -0.05
PDSS2-202ENST00000369037 HNRNPUL2Q1KMD3 747 aaKnown RBP14.74□□□□□ -0.05
PDSS2-202ENST00000369037 KCNH8Q96L42 1107 aa14.74□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms