RNA–Protein interactions for RNA: ENST00000368812.1

EDRF1-203, Transcript of erythroid differentiation regulatory factor 1, humanhuman

TSL 1 (best)

Gene EDRF1, Length 1,380 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EDRF1-203ENST00000368812 NISCHQ9Y2I1 1504 aa26.67■■□□□ 1.86
EDRF1-203ENST00000368812 AEBP2Q6ZN18 517 aaPredicted RBP26.55■■□□□ 1.84
EDRF1-203ENST00000368812 CHIC1Q5VXU3 224 aa25.16■■□□□ 1.62
EDRF1-203ENST00000368812 ABCC9O60706 1549 aa24.06■■□□□ 1.44
EDRF1-203ENST00000368812 CCDC180Q9P1Z9 1646 aa23.86■■□□□ 1.41
EDRF1-203ENST00000368812 RB1CC1Q8TDY2 1594 aa22.84■■□□□ 1.25
EDRF1-203ENST00000368812 DNAJC5BQ9UF47 199 aa22.77■■□□□ 1.24
EDRF1-203ENST00000368812 SENP3Q9H4L4 574 aaPredicted RBP22.67■■□□□ 1.22
EDRF1-203ENST00000368812 NACADO15069 1562 aa22.65■■□□□ 1.22
EDRF1-203ENST00000368812 DCAF8L2P0C7V8 631 aa22.55■■□□□ 1.2
EDRF1-203ENST00000368812 PABPN1Q86U42 306 aaKnown RBP eCLIP22.37■■□□□ 1.17
EDRF1-203ENST00000368812 PHF23Q9BUL5 403 aaPredicted RBP22.36■■□□□ 1.17
EDRF1-203ENST00000368812 MYO15BQ96JP2 1530 aa22.3■■□□□ 1.16
EDRF1-203ENST00000368812 UNC13AQ9UPW8 1703 aa22.23■■□□□ 1.15
EDRF1-203ENST00000368812 BICRAQ9NZM4 1560 aa22.14■■□□□ 1.14
EDRF1-203ENST00000368812 ZCCHC6Q5VYS8 1495 aaKnown RBP22.12■■□□□ 1.13
EDRF1-203ENST00000368812 DCAF1Q9Y4B6 1507 aa22.01■■□□□ 1.11
EDRF1-203ENST00000368812 SHROOM4Q9ULL8 1493 aa21.92■■□□□ 1.1
EDRF1-203ENST00000368812 SCRIBQ14160 1630 aa21.8■■□□□ 1.08
EDRF1-203ENST00000368812 CC2D2AQ9P2K1 1620 aa21.72■■□□□ 1.07
EDRF1-203ENST00000368812 CECR2Q9BXF3 1484 aa21.72■■□□□ 1.07
EDRF1-203ENST00000368812 EIF4G1Q04637 1599 aaKnown RBP21.63■■□□□ 1.05
EDRF1-203ENST00000368812 DNAJC5Q9H3Z4 198 aa21.14■□□□□ 0.98
EDRF1-203ENST00000368812 FOXD1Q16676 465 aa21.13■□□□□ 0.97
EDRF1-203ENST00000368812 NCAPD3P42695 1498 aa20.93■□□□□ 0.94
EDRF1-203ENST00000368812 CUX2O14529 1486 aa20.9■□□□□ 0.94
EDRF1-203ENST00000368812 ERCC6Q03468 1493 aa20.82■□□□□ 0.92
EDRF1-203ENST00000368812 ATAD2BQ9ULI0 1458 aa20.82■□□□□ 0.92
EDRF1-203ENST00000368812 SMARCA4P51532 1647 aa20.79■□□□□ 0.92
EDRF1-203ENST00000368812 SMARCA2P51531 1590 aa20.75■□□□□ 0.91
EDRF1-203ENST00000368812 HMGXB3Q12766 1538 aa20.73■□□□□ 0.91
EDRF1-203ENST00000368812 BAZ1AQ9NRL2 1556 aaPredicted RBP20.7■□□□□ 0.9
EDRF1-203ENST00000368812 BAZ1BQ9UIG0 1483 aaKnown RBP20.62■□□□□ 0.89
EDRF1-203ENST00000368812 NESP48681 1621 aa20.58■□□□□ 0.89
EDRF1-203ENST00000368812 MROH2BQ7Z745 1585 aa20.57■□□□□ 0.88
EDRF1-203ENST00000368812 PEG3Q9GZU2 1588 aa20.57■□□□□ 0.88
EDRF1-203ENST00000368812 LAMC3Q9Y6N6 1575 aa20.47■□□□□ 0.87
EDRF1-203ENST00000368812 THOC2Q8NI27 1593 aaKnown RBP20.43■□□□□ 0.86
EDRF1-203ENST00000368812 PDS5BQ9NTI5 1447 aa20.39■□□□□ 0.86
EDRF1-203ENST00000368812 WIZO95785 1651 aa20.31■□□□□ 0.84
EDRF1-203ENST00000368812 KIF21AQ7Z4S6 1674 aa20.29■□□□□ 0.84
EDRF1-203ENST00000368812 CADPSQ9ULU8 1353 aa20.27■□□□□ 0.84
EDRF1-203ENST00000368812 MRC2Q9UBG0 1479 aa20.18■□□□□ 0.82
EDRF1-203ENST00000368812 RSF1Q96T23 1441 aaPredicted RBP20.17■□□□□ 0.82
EDRF1-203ENST00000368812 WDR62O43379 1518 aa20.14■□□□□ 0.81
EDRF1-203ENST00000368812 PLPPR3Q6T4P5 718 aa20.08■□□□□ 0.8
EDRF1-203ENST00000368812 TRIM41Q8WV44 630 aa20.07■□□□□ 0.8
EDRF1-203ENST00000368812 CEP164Q9UPV0 1460 aa20.06■□□□□ 0.8
EDRF1-203ENST00000368812 TOP2AP11388 1531 aaKnown RBP20.06■□□□□ 0.8
EDRF1-203ENST00000368812 CFTRP13569 1480 aa20.01■□□□□ 0.79
EDRF1-203ENST00000368812 FANCD2Q9BXW9 1451 aa20.01■□□□□ 0.79
EDRF1-203ENST00000368812 OSCARQ8IYS5 282 aa19.92■□□□□ 0.78
EDRF1-203ENST00000368812 URB2Q14146 1524 aaKnown RBP19.85■□□□□ 0.77
EDRF1-203ENST00000368812 CCDC88BA6NC98 1476 aa19.85■□□□□ 0.77
EDRF1-203ENST00000368812 MSH5O43196 834 aa19.81■□□□□ 0.76
EDRF1-203ENST00000368812 PRDM2Q13029 1718 aa19.74■□□□□ 0.75
EDRF1-203ENST00000368812 PIAS4Q8N2W9 510 aaPredicted RBP19.73■□□□□ 0.75
EDRF1-203ENST00000368812 PPP6R1Q9UPN7 881 aa19.7■□□□□ 0.74
EDRF1-203ENST00000368812 IFT140Q96RY7 1462 aa19.69■□□□□ 0.74
EDRF1-203ENST00000368812 ADRA2BP18089 450 aa19.64■□□□□ 0.73
EDRF1-203ENST00000368812 TOPBP1Q92547 1522 aa19.64■□□□□ 0.73
EDRF1-203ENST00000368812 ZNF608Q9ULD9 1512 aaPredicted RBP19.62■□□□□ 0.73
EDRF1-203ENST00000368812 ABCC8Q09428 1581 aa19.61■□□□□ 0.73
EDRF1-203ENST00000368812 RIMBP3CA6NJZ7 1639 aa19.59■□□□□ 0.73
EDRF1-203ENST00000368812 RIMBP3BA6NNM3 1639 aa19.59■□□□□ 0.73
EDRF1-203ENST00000368812 RIMBP3Q9UFD9 1639 aa19.59■□□□□ 0.73
EDRF1-203ENST00000368812 DNMBPQ6XZF7 1577 aa19.55■□□□□ 0.72
EDRF1-203ENST00000368812 ARHGEF11O15085 1522 aa19.54■□□□□ 0.72
EDRF1-203ENST00000368812 EIF4G3O43432 1585 aaKnown RBP19.49■□□□□ 0.71
EDRF1-203ENST00000368812 POLA1P09884 1462 aaPredicted RBP19.45■□□□□ 0.7
EDRF1-203ENST00000368812 AQRO60306 1485 aaKnown RBP eCLIP19.44■□□□□ 0.7
EDRF1-203ENST00000368812 CYB5RLQ6IPT4 315 aa19.44■□□□□ 0.7
EDRF1-203ENST00000368812 TARBP1Q13395 1621 aaKnown RBP19.43■□□□□ 0.7
EDRF1-203ENST00000368812 POTEDQ86YR6 584 aa19.43■□□□□ 0.7
EDRF1-203ENST00000368812 RAD54L2Q9Y4B4 1467 aa19.39■□□□□ 0.69
EDRF1-203ENST00000368812 FBLN2P98095 1184 aa19.37■□□□□ 0.69
EDRF1-203ENST00000368812 SOGA1O94964 1423 aa19.36■□□□□ 0.69
EDRF1-203ENST00000368812 CHD1O14646 1710 aa19.36■□□□□ 0.69
EDRF1-203ENST00000368812 SUPT5HO00267 1087 aaKnown RBP19.34■□□□□ 0.69
EDRF1-203ENST00000368812 FGD5Q6ZNL6 1462 aa19.33■□□□□ 0.69
EDRF1-203ENST00000368812 TDRD9Q8NDG6 1382 aaKnown RBP19.33■□□□□ 0.68
EDRF1-203ENST00000368812 ARAP1Q96P48 1450 aa19.33■□□□□ 0.68
EDRF1-203ENST00000368812 CUX1P39880 1505 aa19.32■□□□□ 0.68
EDRF1-203ENST00000368812 TRHP20396 242 aaPredicted RBP19.29■□□□□ 0.68
EDRF1-203ENST00000368812 WDR97A6NE52 1622 aa19.28■□□□□ 0.68
EDRF1-203ENST00000368812 SNAPC4Q5SXM2 1469 aa19.24■□□□□ 0.67
EDRF1-203ENST00000368812 CHMP7Q8WUX9 453 aaPredicted RBP19.22■□□□□ 0.67
EDRF1-203ENST00000368812 MAGI1Q96QZ7 1491 aaPredicted RBP19.2■□□□□ 0.66
EDRF1-203ENST00000368812 CLASP1Q7Z460 1538 aa19.2■□□□□ 0.66
EDRF1-203ENST00000368812 GRIN2BQ13224 1484 aa19.18■□□□□ 0.66
EDRF1-203ENST00000368812 SYNJ1O43426 1573 aa19.18■□□□□ 0.66
EDRF1-203ENST00000368812 SYNJ2O15056 1496 aa19.14■□□□□ 0.65
EDRF1-203ENST00000368812 GAPVD1Q14C86 1478 aa19.12■□□□□ 0.65
EDRF1-203ENST00000368812 ABCA10Q8WWZ4 1543 aa19.1■□□□□ 0.65
EDRF1-203ENST00000368812 PBRM1Q86U86 1689 aa19.07■□□□□ 0.64
EDRF1-203ENST00000368812 ABCA5Q8WWZ7 1642 aa19.05■□□□□ 0.64
EDRF1-203ENST00000368812 WRNQ14191 1432 aaPredicted RBP eCLIP19.04■□□□□ 0.64
EDRF1-203ENST00000368812 TOP2BQ02880 1626 aa19■□□□□ 0.63
EDRF1-203ENST00000368812 BIVM-ERCC5R4GMW8 1640 aa18.99■□□□□ 0.63
EDRF1-203ENST00000368812 GRIN2AQ12879 1464 aa18.93■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms