RNA–Protein interactions for RNA: ENST00000368646.6

DENND4B-202, Transcript of DENN domain containing 4B, humanhuman

APPRIS ALT2 TSL 5

Gene DENND4B, Length 3,781 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DENND4B-202ENST00000368646 NISCHQ9Y2I1 1504 aa25.56■■□□□ 1.68
DENND4B-202ENST00000368646 HRCP23327 699 aa22.64■■□□□ 1.21
DENND4B-202ENST00000368646 PPARGC1BQ86YN6 1023 aaKnown RBP22.51■■□□□ 1.19
DENND4B-202ENST00000368646 PCGF6Q9BYE7 350 aa22.44■■□□□ 1.18
DENND4B-202ENST00000368646 PELP1Q8IZL8 1130 aaKnown RBP22.42■■□□□ 1.18
DENND4B-202ENST00000368646 SHROOM4Q9ULL8 1493 aa22.33■■□□□ 1.16
DENND4B-202ENST00000368646 SUPT5HO00267 1087 aaKnown RBP22.21■■□□□ 1.15
DENND4B-202ENST00000368646 CCDC180Q9P1Z9 1646 aa22.11■■□□□ 1.13
DENND4B-202ENST00000368646 SCAF1Q9H7N4 1312 aaKnown RBP21.7■■□□□ 1.06
DENND4B-202ENST00000368646 DCAF8L2P0C7V8 631 aa21.69■■□□□ 1.06
DENND4B-202ENST00000368646 MYT1Q01538 1121 aa21.63■■□□□ 1.05
DENND4B-202ENST00000368646 ZCCHC6Q5VYS8 1495 aaKnown RBP21.42■■□□□ 1.02
DENND4B-202ENST00000368646 CHIC1Q5VXU3 224 aa21.42■■□□□ 1.02
DENND4B-202ENST00000368646 LOC105371045A0A1W2PR82 267 aa21.33■■□□□ 1.01
DENND4B-202ENST00000368646 ABCC9O60706 1549 aa21.29■■□□□ 1
DENND4B-202ENST00000368646 MYO15BQ96JP2 1530 aa21.28■■□□□ 1
DENND4B-202ENST00000368646 TRIM26Q12899 539 aaPredicted RBP21.26■□□□□ 0.99
DENND4B-202ENST00000368646 ZEB1P37275 1124 aaPredicted RBP21.2■□□□□ 0.98
DENND4B-202ENST00000368646 GTF3C3Q9Y5Q9 886 aa21.15■□□□□ 0.98
DENND4B-202ENST00000368646 ACIN1Q9UKV3 1341 aaKnown RBP21.09■□□□□ 0.97
DENND4B-202ENST00000368646 NEUROD1Q13562 356 aa21.09■□□□□ 0.97
DENND4B-202ENST00000368646 CENPBP07199 599 aaPredicted RBP21■□□□□ 0.95
DENND4B-202ENST00000368646 EHMT2Q96KQ7 1210 aa20.97■□□□□ 0.95
DENND4B-202ENST00000368646 DCAF1Q9Y4B6 1507 aa20.95■□□□□ 0.94
DENND4B-202ENST00000368646 YTHDC1Q96MU7 727 aaKnown RBP20.84■□□□□ 0.93
DENND4B-202ENST00000368646 FAM9AQ8IZU1 332 aaPredicted RBP20.71■□□□□ 0.91
DENND4B-202ENST00000368646 CCER1Q8TC90 406 aaPredicted RBP20.69■□□□□ 0.9
DENND4B-202ENST00000368646 DIEXFQ68CQ4 756 aaKnown RBP20.69■□□□□ 0.9
DENND4B-202ENST00000368646 NACADO15069 1562 aa20.68■□□□□ 0.9
DENND4B-202ENST00000368646 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP20.64■□□□□ 0.9
DENND4B-202ENST00000368646 SCRIBQ14160 1630 aa20.61■□□□□ 0.89
DENND4B-202ENST00000368646 RB1CC1Q8TDY2 1594 aa20.56■□□□□ 0.88
DENND4B-202ENST00000368646 TTBK1Q5TCY1 1321 aaPredicted RBP20.47■□□□□ 0.87
DENND4B-202ENST00000368646 BCL11AQ9H165 835 aa20.39■□□□□ 0.85
DENND4B-202ENST00000368646 TRIM41Q8WV44 630 aa20.37■□□□□ 0.85
DENND4B-202ENST00000368646 PABPN1Q86U42 306 aaKnown RBP eCLIP20.21■□□□□ 0.83
DENND4B-202ENST00000368646 UNC13AQ9UPW8 1703 aa20.1■□□□□ 0.81
DENND4B-202ENST00000368646 ANP32EQ9BTT0 268 aa20.1■□□□□ 0.81
DENND4B-202ENST00000368646 MIER1Q8N108 512 aa20.08■□□□□ 0.81
DENND4B-202ENST00000368646 ZNF316A6NFI3 1004 aaPredicted RBP20.08■□□□□ 0.8
DENND4B-202ENST00000368646 CSRNP3Q8WYN3 585 aa19.99■□□□□ 0.79
DENND4B-202ENST00000368646 CECR2Q9BXF3 1484 aa19.98■□□□□ 0.79
DENND4B-202ENST00000368646 BICRAQ9NZM4 1560 aa19.92■□□□□ 0.78
DENND4B-202ENST00000368646 RSF1Q96T23 1441 aaPredicted RBP19.91■□□□□ 0.78
DENND4B-202ENST00000368646 BCANQ96GW7 911 aa19.9■□□□□ 0.78
DENND4B-202ENST00000368646 TSHZ2Q9NRE2 1034 aa19.82■□□□□ 0.76
DENND4B-202ENST00000368646 SUPT16HQ9Y5B9 1047 aaKnown RBP19.82■□□□□ 0.76
DENND4B-202ENST00000368646 MROH2BQ7Z745 1585 aa19.81■□□□□ 0.76
DENND4B-202ENST00000368646 BAZ1AQ9NRL2 1556 aaPredicted RBP19.72■□□□□ 0.75
DENND4B-202ENST00000368646 PRKCSHP14314 528 aaPredicted RBP19.71■□□□□ 0.75
DENND4B-202ENST00000368646 HNRNPUL2Q1KMD3 747 aaKnown RBP19.71■□□□□ 0.75
DENND4B-202ENST00000368646 ERICH6Q7L0X2 663 aa19.66■□□□□ 0.74
DENND4B-202ENST00000368646 WIZO95785 1651 aa19.66■□□□□ 0.74
DENND4B-202ENST00000368646 SMARCA4P51532 1647 aa19.63■□□□□ 0.73
DENND4B-202ENST00000368646 FKBP8Q14318 412 aa19.52■□□□□ 0.72
DENND4B-202ENST00000368646 UBTFP17480 764 aaKnown RBP19.51■□□□□ 0.71
DENND4B-202ENST00000368646 ITGAEP38570 1179 aa19.47■□□□□ 0.71
DENND4B-202ENST00000368646 NEFLP07196 543 aa19.47■□□□□ 0.71
DENND4B-202ENST00000368646 CLSPNQ9HAW4 1339 aa19.45■□□□□ 0.7
DENND4B-202ENST00000368646 RANGAP1P46060 587 aaPredicted RBP19.44■□□□□ 0.7
DENND4B-202ENST00000368646 RBM19Q9Y4C8 960 aaKnown RBP19.43■□□□□ 0.7
DENND4B-202ENST00000368646 EIF4G1Q04637 1599 aaKnown RBP19.38■□□□□ 0.69
DENND4B-202ENST00000368646 ATAD2BQ9ULI0 1458 aa19.36■□□□□ 0.69
DENND4B-202ENST00000368646 TOP2AP11388 1531 aaKnown RBP19.35■□□□□ 0.69
DENND4B-202ENST00000368646 BAZ1BQ9UIG0 1483 aaKnown RBP19.3■□□□□ 0.68
DENND4B-202ENST00000368646 SMARCA2P51531 1590 aa19.29■□□□□ 0.68
DENND4B-202ENST00000368646 CCDC88BA6NC98 1476 aa19.26■□□□□ 0.67
DENND4B-202ENST00000368646 PEG3Q9GZU2 1588 aa19.26■□□□□ 0.67
DENND4B-202ENST00000368646 KCNH8Q96L42 1107 aa19.26■□□□□ 0.67
DENND4B-202ENST00000368646 APLP2Q06481 763 aa19.25■□□□□ 0.67
DENND4B-202ENST00000368646 ANO8Q9HCE9 1232 aaPredicted RBP19.21■□□□□ 0.67
DENND4B-202ENST00000368646 ABCC8Q09428 1581 aa19.2■□□□□ 0.66
DENND4B-202ENST00000368646 CEP162Q5TB80 1403 aa19.19■□□□□ 0.66
DENND4B-202ENST00000368646 SOGA1O94964 1423 aa19.18■□□□□ 0.66
DENND4B-202ENST00000368646 DEKP35659 375 aaKnown RBP19.16■□□□□ 0.66
DENND4B-202ENST00000368646 TRIM52Q96A61 297 aa19.15■□□□□ 0.66
DENND4B-202ENST00000368646 MSH5O43196 834 aa19.14■□□□□ 0.66
DENND4B-202ENST00000368646 NBR1Q14596 966 aa19.14■□□□□ 0.66
DENND4B-202ENST00000368646 NCAPD3P42695 1498 aa19.14■□□□□ 0.65
DENND4B-202ENST00000368646 CC2D2AQ9P2K1 1620 aa19.12■□□□□ 0.65
DENND4B-202ENST00000368646 CDK11AQ9UQ88 783 aaPredicted RBP19.11■□□□□ 0.65
DENND4B-202ENST00000368646 IRX6P78412 446 aaPredicted RBP19.09■□□□□ 0.65
DENND4B-202ENST00000368646 CCDC136Q96JN2 1154 aa19.08■□□□□ 0.65
DENND4B-202ENST00000368646 RUSC2Q8N2Y8 1516 aa19.06■□□□□ 0.64
DENND4B-202ENST00000368646 HMGXB3Q12766 1538 aa19.04■□□□□ 0.64
DENND4B-202ENST00000368646 RTN4Q9NQC3 1192 aaKnown RBP19.04■□□□□ 0.64
DENND4B-202ENST00000368646 DDX10Q13206 875 aaKnown RBP19.04■□□□□ 0.64
DENND4B-202ENST00000368646 TNIKQ9UKE5 1360 aa19■□□□□ 0.63
DENND4B-202ENST00000368646 SALL2Q9Y467 1007 aaPredicted RBP18.96■□□□□ 0.63
DENND4B-202ENST00000368646 ZBTB4Q9P1Z0 1013 aaPredicted RBP18.94■□□□□ 0.62
DENND4B-202ENST00000368646 WRNQ14191 1432 aaPredicted RBP eCLIP18.93■□□□□ 0.62
DENND4B-202ENST00000368646 RTL5Q5HYW3 569 aaPredicted RBP18.9■□□□□ 0.62
DENND4B-202ENST00000368646 HIRIP3Q9BW71 556 aaPredicted RBP18.9■□□□□ 0.62
DENND4B-202ENST00000368646 MYT1LQ9UL68 1186 aa18.89■□□□□ 0.62
DENND4B-202ENST00000368646 DNAJC5BQ9UF47 199 aa18.88■□□□□ 0.61
DENND4B-202ENST00000368646 EIF5BO60841 1220 aaKnown RBP18.86■□□□□ 0.61
DENND4B-202ENST00000368646 GOLGA3Q08378 1498 aa18.82■□□□□ 0.6
DENND4B-202ENST00000368646 CLIP1P30622 1438 aa18.8■□□□□ 0.6
DENND4B-202ENST00000368646 ANP32CO43423 234 aa18.8■□□□□ 0.6
DENND4B-202ENST00000368646 FANCIQ9NVI1 1328 aa18.8■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 9.7 ms