RNA–Protein interactions for RNA: ENST00000368517.7

SYCE1-203, Transcript of synaptonemal complex central element protein 1, humanhuman

APPRIS P3 TSL 5 BASIC

Gene SYCE1, Length 1,377 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYCE1-203ENST00000368517 NISCHQ9Y2I1 1504 aa42.31■■■■■ 4.36
SYCE1-203ENST00000368517 CCDC180Q9P1Z9 1646 aa37.85■■■■□ 3.65
SYCE1-203ENST00000368517 ABCC9O60706 1549 aa37.74■■■■□ 3.63
SYCE1-203ENST00000368517 RB1CC1Q8TDY2 1594 aa35.93■■■■□ 3.34
SYCE1-203ENST00000368517 NACADO15069 1562 aa35.73■■■■□ 3.31
SYCE1-203ENST00000368517 DCAF8L2P0C7V8 631 aa35.57■■■■□ 3.28
SYCE1-203ENST00000368517 DNAJC5BQ9UF47 199 aa35.31■■■■□ 3.24
SYCE1-203ENST00000368517 MYO15BQ96JP2 1530 aa35.3■■■■□ 3.24
SYCE1-203ENST00000368517 UNC13AQ9UPW8 1703 aa35.19■■■■□ 3.22
SYCE1-203ENST00000368517 PABPN1Q86U42 306 aaKnown RBP eCLIP35.17■■■■□ 3.22
SYCE1-203ENST00000368517 ZCCHC6Q5VYS8 1495 aaKnown RBP35.12■■■■□ 3.21
SYCE1-203ENST00000368517 BICRAQ9NZM4 1560 aa34.98■■■■□ 3.19
SYCE1-203ENST00000368517 DCAF1Q9Y4B6 1507 aa34.93■■■■□ 3.18
SYCE1-203ENST00000368517 SCRIBQ14160 1630 aa34.56■■■■□ 3.12
SYCE1-203ENST00000368517 SHROOM4Q9ULL8 1493 aa34.41■■■■□ 3.1
SYCE1-203ENST00000368517 CC2D2AQ9P2K1 1620 aa34.09■■■■□ 3.05
SYCE1-203ENST00000368517 EIF4G1Q04637 1599 aaKnown RBP34.06■■■■□ 3.04
SYCE1-203ENST00000368517 CECR2Q9BXF3 1484 aa33.95■■■■□ 3.03
SYCE1-203ENST00000368517 NCAPD3P42695 1498 aa33.01■■■□□ 2.87
SYCE1-203ENST00000368517 SMARCA4P51532 1647 aa32.97■■■□□ 2.87
SYCE1-203ENST00000368517 ATAD2BQ9ULI0 1458 aa32.97■■■□□ 2.87
SYCE1-203ENST00000368517 SMARCA2P51531 1590 aa32.83■■■□□ 2.85
SYCE1-203ENST00000368517 BAZ1AQ9NRL2 1556 aaPredicted RBP32.79■■■□□ 2.84
SYCE1-203ENST00000368517 HMGXB3Q12766 1538 aa32.79■■■□□ 2.84
SYCE1-203ENST00000368517 MROH2BQ7Z745 1585 aa32.65■■■□□ 2.82
SYCE1-203ENST00000368517 PEG3Q9GZU2 1588 aa32.64■■■□□ 2.82
SYCE1-203ENST00000368517 BAZ1BQ9UIG0 1483 aaKnown RBP32.61■■■□□ 2.81
SYCE1-203ENST00000368517 NESP48681 1621 aa32.51■■■□□ 2.79
SYCE1-203ENST00000368517 ERCC6Q03468 1493 aa32.5■■■□□ 2.79
SYCE1-203ENST00000368517 CUX2O14529 1486 aa32.4■■■□□ 2.78
SYCE1-203ENST00000368517 WIZO95785 1651 aa32.25■■■□□ 2.75
SYCE1-203ENST00000368517 LAMC3Q9Y6N6 1575 aa32.21■■■□□ 2.75
SYCE1-203ENST00000368517 DNAJC5Q9H3Z4 198 aa32.19■■■□□ 2.74
SYCE1-203ENST00000368517 THOC2Q8NI27 1593 aaKnown RBP32.12■■■□□ 2.73
SYCE1-203ENST00000368517 KIF21AQ7Z4S6 1674 aa32.06■■■□□ 2.72
SYCE1-203ENST00000368517 RSF1Q96T23 1441 aaPredicted RBP32.02■■■□□ 2.72
SYCE1-203ENST00000368517 CADPSQ9ULU8 1353 aa32.01■■■□□ 2.72
SYCE1-203ENST00000368517 PDS5BQ9NTI5 1447 aa32■■■□□ 2.71
SYCE1-203ENST00000368517 TOP2AP11388 1531 aaKnown RBP31.82■■■□□ 2.69
SYCE1-203ENST00000368517 MRC2Q9UBG0 1479 aa31.77■■■□□ 2.68
SYCE1-203ENST00000368517 CFTRP13569 1480 aa31.7■■■□□ 2.67
SYCE1-203ENST00000368517 WDR62O43379 1518 aa31.69■■■□□ 2.66
SYCE1-203ENST00000368517 FANCD2Q9BXW9 1451 aa31.66■■■□□ 2.66
SYCE1-203ENST00000368517 CEP164Q9UPV0 1460 aa31.66■■■□□ 2.66
SYCE1-203ENST00000368517 CCDC88BA6NC98 1476 aa31.48■■■□□ 2.63
SYCE1-203ENST00000368517 URB2Q14146 1524 aaKnown RBP31.44■■■□□ 2.62
SYCE1-203ENST00000368517 PRDM2Q13029 1718 aa31.37■■■□□ 2.61
SYCE1-203ENST00000368517 TOPBP1Q92547 1522 aa31.1■■■□□ 2.57
SYCE1-203ENST00000368517 ZNF608Q9ULD9 1512 aaPredicted RBP31.03■■■□□ 2.56
SYCE1-203ENST00000368517 IFT140Q96RY7 1462 aa31.01■■■□□ 2.55
SYCE1-203ENST00000368517 DNMBPQ6XZF7 1577 aa30.98■■■□□ 2.55
SYCE1-203ENST00000368517 ABCC8Q09428 1581 aa30.94■■■□□ 2.54
SYCE1-203ENST00000368517 OSCARQ8IYS5 282 aa30.92■■■□□ 2.54
SYCE1-203ENST00000368517 TRIM41Q8WV44 630 aa30.86■■■□□ 2.53
SYCE1-203ENST00000368517 EIF4G3O43432 1585 aaKnown RBP30.83■■■□□ 2.53
SYCE1-203ENST00000368517 TARBP1Q13395 1621 aaKnown RBP30.82■■■□□ 2.52
SYCE1-203ENST00000368517 POLA1P09884 1462 aaPredicted RBP30.8■■■□□ 2.52
SYCE1-203ENST00000368517 AQRO60306 1485 aaKnown RBP eCLIP30.75■■■□□ 2.51
SYCE1-203ENST00000368517 RAD54L2Q9Y4B4 1467 aa30.71■■■□□ 2.51
SYCE1-203ENST00000368517 SUPT5HO00267 1087 aaKnown RBP30.68■■■□□ 2.5
SYCE1-203ENST00000368517 CUX1P39880 1505 aa30.66■■■□□ 2.5
SYCE1-203ENST00000368517 FGD5Q6ZNL6 1462 aa30.63■■■□□ 2.49
SYCE1-203ENST00000368517 SOGA1O94964 1423 aa30.61■■■□□ 2.49
SYCE1-203ENST00000368517 TDRD9Q8NDG6 1382 aaKnown RBP30.58■■■□□ 2.49
SYCE1-203ENST00000368517 RIMBP3CA6NJZ7 1639 aa30.57■■■□□ 2.48
SYCE1-203ENST00000368517 RIMBP3BA6NNM3 1639 aa30.57■■■□□ 2.48
SYCE1-203ENST00000368517 RIMBP3Q9UFD9 1639 aa30.57■■■□□ 2.48
SYCE1-203ENST00000368517 CHD1O14646 1710 aa30.56■■■□□ 2.48
SYCE1-203ENST00000368517 ARHGEF11O15085 1522 aa30.49■■■□□ 2.47
SYCE1-203ENST00000368517 WDR97A6NE52 1622 aa30.43■■■□□ 2.46
SYCE1-203ENST00000368517 FBLN2P98095 1184 aa30.43■■■□□ 2.46
SYCE1-203ENST00000368517 SNAPC4Q5SXM2 1469 aa30.43■■■□□ 2.46
SYCE1-203ENST00000368517 GRIN2BQ13224 1484 aa30.33■■■□□ 2.45
SYCE1-203ENST00000368517 MAGI1Q96QZ7 1491 aaPredicted RBP30.31■■■□□ 2.44
SYCE1-203ENST00000368517 ABCA10Q8WWZ4 1543 aa30.27■■■□□ 2.44
SYCE1-203ENST00000368517 GAPVD1Q14C86 1478 aa30.26■■■□□ 2.43
SYCE1-203ENST00000368517 PBRM1Q86U86 1689 aa30.25■■■□□ 2.43
SYCE1-203ENST00000368517 ABCA5Q8WWZ7 1642 aa30.24■■■□□ 2.43
SYCE1-203ENST00000368517 CLASP1Q7Z460 1538 aa30.24■■■□□ 2.43
SYCE1-203ENST00000368517 ARAP1Q96P48 1450 aa30.23■■■□□ 2.43
SYCE1-203ENST00000368517 CYB5RLQ6IPT4 315 aa30.22■■■□□ 2.43
SYCE1-203ENST00000368517 CHMP7Q8WUX9 453 aaPredicted RBP30.22■■■□□ 2.43
SYCE1-203ENST00000368517 SYNJ2O15056 1496 aa30.22■■■□□ 2.43
SYCE1-203ENST00000368517 SYNJ1O43426 1573 aa30.18■■■□□ 2.42
SYCE1-203ENST00000368517 TOP2BQ02880 1626 aa30.17■■■□□ 2.42
SYCE1-203ENST00000368517 BIVM-ERCC5R4GMW8 1640 aa30.17■■■□□ 2.42
SYCE1-203ENST00000368517 WRNQ14191 1432 aaPredicted RBP eCLIP30.16■■■□□ 2.42
SYCE1-203ENST00000368517 ADAMTS12P58397 1594 aa30■■■□□ 2.39
SYCE1-203ENST00000368517 GRIN2AQ12879 1464 aa29.96■■■□□ 2.39
SYCE1-203ENST00000368517 CEP170Q5SW79 1584 aa29.88■■■□□ 2.37
SYCE1-203ENST00000368517 FHAD1B1AJZ9 1412 aa29.88■■■□□ 2.37
SYCE1-203ENST00000368517 NUP160Q12769 1436 aa29.88■■■□□ 2.37
SYCE1-203ENST00000368517 ERICH3Q5RHP9 1530 aa29.87■■■□□ 2.37
SYCE1-203ENST00000368517 ERCC6L2Q5T890 1561 aa29.83■■■□□ 2.37
SYCE1-203ENST00000368517 TRHP20396 242 aaPredicted RBP29.77■■■□□ 2.36
SYCE1-203ENST00000368517 SHROOM2Q13796 1616 aa29.72■■■□□ 2.35
SYCE1-203ENST00000368517 IGF1RP08069 1367 aa29.57■■■□□ 2.32
SYCE1-203ENST00000368517 RUSC2Q8N2Y8 1516 aa29.57■■■□□ 2.32
SYCE1-203ENST00000368517 PRG4Q92954 1404 aaPredicted RBP29.55■■■□□ 2.32
SYCE1-203ENST00000368517 KIF27Q86VH2 1401 aa29.54■■■□□ 2.32
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms