RNA–Protein interactions for RNA: ENST00000368508.7

ROS1-202, Transcript of ROS proto-oncogene 1, receptor tyrosine kinase, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene ROS1, Length 7,435 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ROS1-202ENST00000368508 NISCHQ9Y2I1 1504 aa6.17□□□□□ -1.42
ROS1-202ENST00000368508 CCDC180Q9P1Z9 1646 aa5.46□□□□□ -1.54
ROS1-202ENST00000368508 DCAF8L2P0C7V8 631 aa5.43□□□□□ -1.54
ROS1-202ENST00000368508 MYO15BQ96JP2 1530 aa5.25□□□□□ -1.57
ROS1-202ENST00000368508 MYT1Q01538 1121 aa5.25□□□□□ -1.57
ROS1-202ENST00000368508 DCAF1Q9Y4B6 1507 aa5.23□□□□□ -1.57
ROS1-202ENST00000368508 FAM9AQ8IZU1 332 aaPredicted RBP5.23□□□□□ -1.57
ROS1-202ENST00000368508 NACADO15069 1562 aa5.23□□□□□ -1.57
ROS1-202ENST00000368508 RB1CC1Q8TDY2 1594 aa5.21□□□□□ -1.58
ROS1-202ENST00000368508 ABCC9O60706 1549 aa5.17□□□□□ -1.58
ROS1-202ENST00000368508 SHROOM4Q9ULL8 1493 aa5.17□□□□□ -1.58
ROS1-202ENST00000368508 ZCCHC6Q5VYS8 1495 aaKnown RBP5.14□□□□□ -1.59
ROS1-202ENST00000368508 PELP1Q8IZL8 1130 aaKnown RBP5.13□□□□□ -1.59
ROS1-202ENST00000368508 EHMT2Q96KQ7 1210 aa5.12□□□□□ -1.59
ROS1-202ENST00000368508 PCGF6Q9BYE7 350 aa5.06□□□□□ -1.6
ROS1-202ENST00000368508 ERICH6Q7L0X2 663 aa5.05□□□□□ -1.6
ROS1-202ENST00000368508 YTHDC1Q96MU7 727 aaKnown RBP5.03□□□□□ -1.6
ROS1-202ENST00000368508 TTBK1Q5TCY1 1321 aaPredicted RBP4.97□□□□□ -1.61
ROS1-202ENST00000368508 SUPT5HO00267 1087 aaKnown RBP4.96□□□□□ -1.62
ROS1-202ENST00000368508 PPARGC1BQ86YN6 1023 aaKnown RBP4.95□□□□□ -1.62
ROS1-202ENST00000368508 SCRIBQ14160 1630 aa4.94□□□□□ -1.62
ROS1-202ENST00000368508 BAZ1AQ9NRL2 1556 aaPredicted RBP4.93□□□□□ -1.62
ROS1-202ENST00000368508 APLP2Q06481 763 aa4.91□□□□□ -1.62
ROS1-202ENST00000368508 SMARCA2P51531 1590 aa4.91□□□□□ -1.62
ROS1-202ENST00000368508 CENPBP07199 599 aaPredicted RBP4.9□□□□□ -1.62
ROS1-202ENST00000368508 PABPN1Q86U42 306 aaKnown RBP eCLIP4.86□□□□□ -1.63
ROS1-202ENST00000368508 MYT1LQ9UL68 1186 aa4.84□□□□□ -1.63
ROS1-202ENST00000368508 BAZ1BQ9UIG0 1483 aaKnown RBP4.84□□□□□ -1.63
ROS1-202ENST00000368508 TRIM41Q8WV44 630 aa4.84□□□□□ -1.63
ROS1-202ENST00000368508 TRIM26Q12899 539 aaPredicted RBP4.83□□□□□ -1.64
ROS1-202ENST00000368508 EEA1Q15075 1411 aa4.83□□□□□ -1.64
ROS1-202ENST00000368508 ACIN1Q9UKV3 1341 aaKnown RBP4.83□□□□□ -1.64
ROS1-202ENST00000368508 PDS5BQ9NTI5 1447 aa4.82□□□□□ -1.64
ROS1-202ENST00000368508 ABCC8Q09428 1581 aa4.82□□□□□ -1.64
ROS1-202ENST00000368508 EIF5BO60841 1220 aaKnown RBP4.8□□□□□ -1.64
ROS1-202ENST00000368508 CCER1Q8TC90 406 aaPredicted RBP4.79□□□□□ -1.64
ROS1-202ENST00000368508 GTF3C3Q9Y5Q9 886 aa4.78□□□□□ -1.64
ROS1-202ENST00000368508 NCAPD3P42695 1498 aa4.77□□□□□ -1.65
ROS1-202ENST00000368508 RANGAP1P46060 587 aaPredicted RBP4.77□□□□□ -1.65
ROS1-202ENST00000368508 HRCP23327 699 aa4.77□□□□□ -1.65
ROS1-202ENST00000368508 BCANQ96GW7 911 aa4.75□□□□□ -1.65
ROS1-202ENST00000368508 HMGXB3Q12766 1538 aa4.75□□□□□ -1.65
ROS1-202ENST00000368508 CDK11AQ9UQ88 783 aaPredicted RBP4.74□□□□□ -1.65
ROS1-202ENST00000368508 RSF1Q96T23 1441 aaPredicted RBP4.74□□□□□ -1.65
ROS1-202ENST00000368508 CECR2Q9BXF3 1484 aa4.74□□□□□ -1.65
ROS1-202ENST00000368508 ERCC6Q03468 1493 aa4.73□□□□□ -1.65
ROS1-202ENST00000368508 ATP1B4Q9UN42 357 aaPredicted RBP4.73□□□□□ -1.65
ROS1-202ENST00000368508 NEFLP07196 543 aa4.73□□□□□ -1.65
ROS1-202ENST00000368508 TOP2AP11388 1531 aaKnown RBP4.72□□□□□ -1.65
ROS1-202ENST00000368508 CADPSQ9ULU8 1353 aa4.71□□□□□ -1.65
ROS1-202ENST00000368508 ATAD2BQ9ULI0 1458 aa4.71□□□□□ -1.65
ROS1-202ENST00000368508 UBTFP17480 764 aaKnown RBP4.71□□□□□ -1.66
ROS1-202ENST00000368508 NPM1P06748 294 aaKnown RBP eCLIP4.7□□□□□ -1.66
ROS1-202ENST00000368508 SMARCA4P51532 1647 aa4.7□□□□□ -1.66
ROS1-202ENST00000368508 CNGB1Q14028 1251 aaPredicted RBP4.69□□□□□ -1.66
ROS1-202ENST00000368508 WRNQ14191 1432 aaPredicted RBP eCLIP4.69□□□□□ -1.66
ROS1-202ENST00000368508 KIF27Q86VH2 1401 aa4.69□□□□□ -1.66
ROS1-202ENST00000368508 EIF4G1Q04637 1599 aaKnown RBP4.68□□□□□ -1.66
ROS1-202ENST00000368508 SCAF1Q9H7N4 1312 aaKnown RBP4.68□□□□□ -1.66
ROS1-202ENST00000368508 BCL11AQ9H165 835 aa4.67□□□□□ -1.66
ROS1-202ENST00000368508 RTL5Q5HYW3 569 aaPredicted RBP4.66□□□□□ -1.66
ROS1-202ENST00000368508 CEP164Q9UPV0 1460 aa4.66□□□□□ -1.66
ROS1-202ENST00000368508 RTN4Q9NQC3 1192 aaKnown RBP4.66□□□□□ -1.66
ROS1-202ENST00000368508 CSRNP3Q8WYN3 585 aa4.66□□□□□ -1.66
ROS1-202ENST00000368508 PEG3Q9GZU2 1588 aa4.65□□□□□ -1.67
ROS1-202ENST00000368508 NBR1Q14596 966 aa4.65□□□□□ -1.67
ROS1-202ENST00000368508 ZEB1P37275 1124 aaPredicted RBP4.64□□□□□ -1.67
ROS1-202ENST00000368508 DAXXQ9UER7 740 aaPredicted RBP4.64□□□□□ -1.67
ROS1-202ENST00000368508 CHMP7Q8WUX9 453 aaPredicted RBP4.63□□□□□ -1.67
ROS1-202ENST00000368508 CARMIL2Q6F5E8 1435 aa4.63□□□□□ -1.67
ROS1-202ENST00000368508 LAMC3Q9Y6N6 1575 aa4.63□□□□□ -1.67
ROS1-202ENST00000368508 DIEXFQ68CQ4 756 aaKnown RBP4.63□□□□□ -1.67
ROS1-202ENST00000368508 AMER1Q5JTC6 1135 aaPredicted RBP4.62□□□□□ -1.67
ROS1-202ENST00000368508 ZBTB4Q9P1Z0 1013 aaPredicted RBP4.62□□□□□ -1.67
ROS1-202ENST00000368508 MROH2BQ7Z745 1585 aa4.61□□□□□ -1.67
ROS1-202ENST00000368508 CHIC1Q5VXU3 224 aa4.61□□□□□ -1.67
ROS1-202ENST00000368508 GOLGA3Q08378 1498 aa4.61□□□□□ -1.67
ROS1-202ENST00000368508 ARXQ96QS3 562 aa4.6□□□□□ -1.67
ROS1-202ENST00000368508 CFTRP13569 1480 aa4.6□□□□□ -1.67
ROS1-202ENST00000368508 BICRAQ9NZM4 1560 aa4.59□□□□□ -1.67
ROS1-202ENST00000368508 FHAD1B1AJZ9 1412 aa4.59□□□□□ -1.67
ROS1-202ENST00000368508 IFT140Q96RY7 1462 aa4.59□□□□□ -1.67
ROS1-202ENST00000368508 MRC2Q9UBG0 1479 aa4.59□□□□□ -1.67
ROS1-202ENST00000368508 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP4.59□□□□□ -1.67
ROS1-202ENST00000368508 HNRNPUL2Q1KMD3 747 aaKnown RBP4.59□□□□□ -1.67
ROS1-202ENST00000368508 FANCD2Q9BXW9 1451 aa4.59□□□□□ -1.68
ROS1-202ENST00000368508 CCDC136Q96JN2 1154 aa4.58□□□□□ -1.68
ROS1-202ENST00000368508 CCDC88BA6NC98 1476 aa4.57□□□□□ -1.68
ROS1-202ENST00000368508 ZNF316A6NFI3 1004 aaPredicted RBP4.57□□□□□ -1.68
ROS1-202ENST00000368508 CC2D2AQ9P2K1 1620 aa4.57□□□□□ -1.68
ROS1-202ENST00000368508 SOGA1O94964 1423 aa4.57□□□□□ -1.68
ROS1-202ENST00000368508 LOC105371045A0A1W2PR82 267 aa4.57□□□□□ -1.68
ROS1-202ENST00000368508 FBLN2P98095 1184 aa4.56□□□□□ -1.68
ROS1-202ENST00000368508 WDR97A6NE52 1622 aa4.56□□□□□ -1.68
ROS1-202ENST00000368508 NEUROD1Q13562 356 aa4.56□□□□□ -1.68
ROS1-202ENST00000368508 CUX2O14529 1486 aa4.56□□□□□ -1.68
ROS1-202ENST00000368508 CEP162Q5TB80 1403 aa4.55□□□□□ -1.68
ROS1-202ENST00000368508 NPM2Q86SE8 214 aaKnown RBP4.55□□□□□ -1.68
ROS1-202ENST00000368508 ITGAEP38570 1179 aa4.54□□□□□ -1.68
ROS1-202ENST00000368508 POLR3GLQ9BT43 218 aa4.54□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms