RNA–Protein interactions for RNA: ENST00000367154.5

LEMD1-205, Transcript of LEM domain containing 1, humanhuman

TSL 2 BASIC

Gene LEMD1, Length 786 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LEMD1-205ENST00000367154 NISCHQ9Y2I1 1504 aa33.58■■■□□ 2.97
LEMD1-205ENST00000367154 CCDC180Q9P1Z9 1646 aa29.8■■■□□ 2.36
LEMD1-205ENST00000367154 ABCC9O60706 1549 aa29.12■■■□□ 2.25
LEMD1-205ENST00000367154 DCAF8L2P0C7V8 631 aa28.16■■■□□ 2.1
LEMD1-205ENST00000367154 RB1CC1Q8TDY2 1594 aa28.05■■■□□ 2.08
LEMD1-205ENST00000367154 NACADO15069 1562 aa28.03■■■□□ 2.08
LEMD1-205ENST00000367154 ZCCHC6Q5VYS8 1495 aaKnown RBP27.98■■■□□ 2.07
LEMD1-205ENST00000367154 MYO15BQ96JP2 1530 aa27.86■■■□□ 2.05
LEMD1-205ENST00000367154 DCAF1Q9Y4B6 1507 aa27.77■■■□□ 2.04
LEMD1-205ENST00000367154 UNC13AQ9UPW8 1703 aa27.31■■□□□ 1.96
LEMD1-205ENST00000367154 PABPN1Q86U42 306 aaKnown RBP eCLIP27.25■■□□□ 1.95
LEMD1-205ENST00000367154 SCRIBQ14160 1630 aa27.23■■□□□ 1.95
LEMD1-205ENST00000367154 BICRAQ9NZM4 1560 aa27.12■■□□□ 1.93
LEMD1-205ENST00000367154 SHROOM4Q9ULL8 1493 aa26.91■■□□□ 1.9
LEMD1-205ENST00000367154 DNAJC5BQ9UF47 199 aa26.58■■□□□ 1.85
LEMD1-205ENST00000367154 EIF4G1Q04637 1599 aaKnown RBP26.45■■□□□ 1.82
LEMD1-205ENST00000367154 CC2D2AQ9P2K1 1620 aa26.31■■□□□ 1.8
LEMD1-205ENST00000367154 CECR2Q9BXF3 1484 aa26.17■■□□□ 1.78
LEMD1-205ENST00000367154 BAZ1AQ9NRL2 1556 aaPredicted RBP26.05■■□□□ 1.76
LEMD1-205ENST00000367154 SMARCA4P51532 1647 aa26.03■■□□□ 1.76
LEMD1-205ENST00000367154 SMARCA2P51531 1590 aa25.88■■□□□ 1.73
LEMD1-205ENST00000367154 ATAD2BQ9ULI0 1458 aa25.88■■□□□ 1.73
LEMD1-205ENST00000367154 MROH2BQ7Z745 1585 aa25.87■■□□□ 1.73
LEMD1-205ENST00000367154 NCAPD3P42695 1498 aa25.85■■□□□ 1.73
LEMD1-205ENST00000367154 PEG3Q9GZU2 1588 aa25.75■■□□□ 1.71
LEMD1-205ENST00000367154 HMGXB3Q12766 1538 aa25.73■■□□□ 1.71
LEMD1-205ENST00000367154 BAZ1BQ9UIG0 1483 aaKnown RBP25.72■■□□□ 1.71
LEMD1-205ENST00000367154 RSF1Q96T23 1441 aaPredicted RBP25.63■■□□□ 1.69
LEMD1-205ENST00000367154 WIZO95785 1651 aa25.6■■□□□ 1.69
LEMD1-205ENST00000367154 TOP2AP11388 1531 aaKnown RBP25.36■■□□□ 1.65
LEMD1-205ENST00000367154 NESP48681 1621 aa25.19■■□□□ 1.62
LEMD1-205ENST00000367154 LAMC3Q9Y6N6 1575 aa25.16■■□□□ 1.62
LEMD1-205ENST00000367154 ERCC6Q03468 1493 aa25.15■■□□□ 1.62
LEMD1-205ENST00000367154 SUPT5HO00267 1087 aaKnown RBP25.15■■□□□ 1.62
LEMD1-205ENST00000367154 CADPSQ9ULU8 1353 aa25.13■■□□□ 1.61
LEMD1-205ENST00000367154 CCDC88BA6NC98 1476 aa25.06■■□□□ 1.6
LEMD1-205ENST00000367154 PDS5BQ9NTI5 1447 aa25.04■■□□□ 1.6
LEMD1-205ENST00000367154 CFTRP13569 1480 aa24.97■■□□□ 1.59
LEMD1-205ENST00000367154 KIF21AQ7Z4S6 1674 aa24.88■■□□□ 1.57
LEMD1-205ENST00000367154 FANCD2Q9BXW9 1451 aa24.84■■□□□ 1.57
LEMD1-205ENST00000367154 CEP164Q9UPV0 1460 aa24.82■■□□□ 1.56
LEMD1-205ENST00000367154 CUX2O14529 1486 aa24.8■■□□□ 1.56
LEMD1-205ENST00000367154 THOC2Q8NI27 1593 aaKnown RBP24.77■■□□□ 1.56
LEMD1-205ENST00000367154 PRDM2Q13029 1718 aa24.75■■□□□ 1.55
LEMD1-205ENST00000367154 MRC2Q9UBG0 1479 aa24.75■■□□□ 1.55
LEMD1-205ENST00000367154 WDR62O43379 1518 aa24.63■■□□□ 1.53
LEMD1-205ENST00000367154 URB2Q14146 1524 aaKnown RBP24.55■■□□□ 1.52
LEMD1-205ENST00000367154 ABCC8Q09428 1581 aa24.48■■□□□ 1.51
LEMD1-205ENST00000367154 TOPBP1Q92547 1522 aa24.44■■□□□ 1.5
LEMD1-205ENST00000367154 DNMBPQ6XZF7 1577 aa24.42■■□□□ 1.5
LEMD1-205ENST00000367154 IFT140Q96RY7 1462 aa24.29■■□□□ 1.48
LEMD1-205ENST00000367154 CUX1P39880 1505 aa24.27■■□□□ 1.48
LEMD1-205ENST00000367154 POLA1P09884 1462 aaPredicted RBP24.24■■□□□ 1.47
LEMD1-205ENST00000367154 FGD5Q6ZNL6 1462 aa24.2■■□□□ 1.47
LEMD1-205ENST00000367154 WRNQ14191 1432 aaPredicted RBP eCLIP24.2■■□□□ 1.46
LEMD1-205ENST00000367154 SOGA1O94964 1423 aa24.18■■□□□ 1.46
LEMD1-205ENST00000367154 RAD54L2Q9Y4B4 1467 aa24.13■■□□□ 1.45
LEMD1-205ENST00000367154 ZNF608Q9ULD9 1512 aaPredicted RBP24.13■■□□□ 1.45
LEMD1-205ENST00000367154 TARBP1Q13395 1621 aaKnown RBP24.13■■□□□ 1.45
LEMD1-205ENST00000367154 TOP2BQ02880 1626 aa24.1■■□□□ 1.45
LEMD1-205ENST00000367154 SYNJ1O43426 1573 aa24.08■■□□□ 1.45
LEMD1-205ENST00000367154 BIVM-ERCC5R4GMW8 1640 aa24.07■■□□□ 1.44
LEMD1-205ENST00000367154 EIF4G3O43432 1585 aaKnown RBP24.04■■□□□ 1.44
LEMD1-205ENST00000367154 AQRO60306 1485 aaKnown RBP eCLIP24.03■■□□□ 1.44
LEMD1-205ENST00000367154 TDRD9Q8NDG6 1382 aaKnown RBP24.03■■□□□ 1.44
LEMD1-205ENST00000367154 WDR97A6NE52 1622 aa23.98■■□□□ 1.43
LEMD1-205ENST00000367154 ABCA10Q8WWZ4 1543 aa23.96■■□□□ 1.43
LEMD1-205ENST00000367154 DNAJC5Q9H3Z4 198 aa23.93■■□□□ 1.42
LEMD1-205ENST00000367154 GAPVD1Q14C86 1478 aa23.89■■□□□ 1.42
LEMD1-205ENST00000367154 GRIN2BQ13224 1484 aa23.87■■□□□ 1.41
LEMD1-205ENST00000367154 OSCARQ8IYS5 282 aa23.83■■□□□ 1.41
LEMD1-205ENST00000367154 ABCA5Q8WWZ7 1642 aa23.83■■□□□ 1.41
LEMD1-205ENST00000367154 SNAPC4Q5SXM2 1469 aa23.82■■□□□ 1.4
LEMD1-205ENST00000367154 FBLN2P98095 1184 aa23.82■■□□□ 1.4
LEMD1-205ENST00000367154 MAGI1Q96QZ7 1491 aaPredicted RBP23.8■■□□□ 1.4
LEMD1-205ENST00000367154 PBRM1Q86U86 1689 aa23.79■■□□□ 1.4
LEMD1-205ENST00000367154 TRIM41Q8WV44 630 aa23.76■■□□□ 1.39
LEMD1-205ENST00000367154 CHMP7Q8WUX9 453 aaPredicted RBP23.75■■□□□ 1.39
LEMD1-205ENST00000367154 KIF27Q86VH2 1401 aa23.71■■□□□ 1.39
LEMD1-205ENST00000367154 CHD1O14646 1710 aa23.7■■□□□ 1.39
LEMD1-205ENST00000367154 SYNJ2O15056 1496 aa23.7■■□□□ 1.38
LEMD1-205ENST00000367154 ERICH3Q5RHP9 1530 aa23.69■■□□□ 1.38
LEMD1-205ENST00000367154 FHAD1B1AJZ9 1412 aa23.62■■□□□ 1.37
LEMD1-205ENST00000367154 ADAMTS12P58397 1594 aa23.61■■□□□ 1.37
LEMD1-205ENST00000367154 GRIN2AQ12879 1464 aa23.56■■□□□ 1.36
LEMD1-205ENST00000367154 IGF1RP08069 1367 aa23.55■■□□□ 1.36
LEMD1-205ENST00000367154 CUL7Q14999 1698 aa23.49■■□□□ 1.35
LEMD1-205ENST00000367154 CHIC1Q5VXU3 224 aa23.47■■□□□ 1.35
LEMD1-205ENST00000367154 CLASP1Q7Z460 1538 aa23.45■■□□□ 1.34
LEMD1-205ENST00000367154 RUSC2Q8N2Y8 1516 aa23.45■■□□□ 1.34
LEMD1-205ENST00000367154 CARMIL1Q5VZK9 1371 aa23.45■■□□□ 1.34
LEMD1-205ENST00000367154 NUP160Q12769 1436 aa23.42■■□□□ 1.34
LEMD1-205ENST00000367154 CEP170Q5SW79 1584 aa23.4■■□□□ 1.34
LEMD1-205ENST00000367154 ARHGEF11O15085 1522 aa23.38■■□□□ 1.33
LEMD1-205ENST00000367154 RIMBP3CA6NJZ7 1639 aa23.37■■□□□ 1.33
LEMD1-205ENST00000367154 RIMBP3BA6NNM3 1639 aa23.37■■□□□ 1.33
LEMD1-205ENST00000367154 RIMBP3Q9UFD9 1639 aa23.37■■□□□ 1.33
LEMD1-205ENST00000367154 RAPGEF2Q9Y4G8 1499 aa23.32■■□□□ 1.32
LEMD1-205ENST00000367154 EEA1Q15075 1411 aa23.32■■□□□ 1.32
LEMD1-205ENST00000367154 CSRNP3Q8WYN3 585 aa23.28■■□□□ 1.32
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms