RNA–Protein interactions for RNA: ENST00000366741.5

MRPL55-214, Transcript of mitochondrial ribosomal protein L55, humanhuman

APPRIS P1 TSL 2 BASIC

Gene MRPL55, Length 603 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL55-214ENST00000366741 NISCHQ9Y2I1 1504 aa35.67■■■■□ 3.3
MRPL55-214ENST00000366741 CCDC180Q9P1Z9 1646 aa31.78■■■□□ 2.68
MRPL55-214ENST00000366741 ABCC9O60706 1549 aa31.06■■■□□ 2.56
MRPL55-214ENST00000366741 RB1CC1Q8TDY2 1594 aa29.95■■■□□ 2.39
MRPL55-214ENST00000366741 NACADO15069 1562 aa29.94■■■□□ 2.38
MRPL55-214ENST00000366741 MYO15BQ96JP2 1530 aa29.81■■■□□ 2.36
MRPL55-214ENST00000366741 ZCCHC6Q5VYS8 1495 aaKnown RBP29.73■■■□□ 2.35
MRPL55-214ENST00000366741 DCAF8L2P0C7V8 631 aa29.71■■■□□ 2.35
MRPL55-214ENST00000366741 DCAF1Q9Y4B6 1507 aa29.61■■■□□ 2.33
MRPL55-214ENST00000366741 UNC13AQ9UPW8 1703 aa29.1■■■□□ 2.25
MRPL55-214ENST00000366741 PABPN1Q86U42 306 aaKnown RBP eCLIP28.97■■■□□ 2.23
MRPL55-214ENST00000366741 BICRAQ9NZM4 1560 aa28.96■■■□□ 2.23
MRPL55-214ENST00000366741 SHROOM4Q9ULL8 1493 aa28.88■■■□□ 2.21
MRPL55-214ENST00000366741 SCRIBQ14160 1630 aa28.87■■■□□ 2.21
MRPL55-214ENST00000366741 DNAJC5BQ9UF47 199 aa28.52■■■□□ 2.16
MRPL55-214ENST00000366741 EIF4G1Q04637 1599 aaKnown RBP28.25■■■□□ 2.11
MRPL55-214ENST00000366741 CC2D2AQ9P2K1 1620 aa28.11■■■□□ 2.09
MRPL55-214ENST00000366741 CECR2Q9BXF3 1484 aa27.98■■■□□ 2.07
MRPL55-214ENST00000366741 BAZ1AQ9NRL2 1556 aaPredicted RBP27.69■■■□□ 2.02
MRPL55-214ENST00000366741 SMARCA4P51532 1647 aa27.67■■■□□ 2.02
MRPL55-214ENST00000366741 NCAPD3P42695 1498 aa27.62■■■□□ 2.01
MRPL55-214ENST00000366741 SMARCA2P51531 1590 aa27.58■■■□□ 2.01
MRPL55-214ENST00000366741 ATAD2BQ9ULI0 1458 aa27.57■■■□□ 2
MRPL55-214ENST00000366741 PEG3Q9GZU2 1588 aa27.48■■□□□ 1.99
MRPL55-214ENST00000366741 HMGXB3Q12766 1538 aa27.48■■□□□ 1.99
MRPL55-214ENST00000366741 MROH2BQ7Z745 1585 aa27.43■■□□□ 1.98
MRPL55-214ENST00000366741 BAZ1BQ9UIG0 1483 aaKnown RBP27.35■■□□□ 1.97
MRPL55-214ENST00000366741 RSF1Q96T23 1441 aaPredicted RBP27.13■■□□□ 1.93
MRPL55-214ENST00000366741 WIZO95785 1651 aa27.08■■□□□ 1.93
MRPL55-214ENST00000366741 TOP2AP11388 1531 aaKnown RBP26.9■■□□□ 1.9
MRPL55-214ENST00000366741 LAMC3Q9Y6N6 1575 aa26.89■■□□□ 1.9
MRPL55-214ENST00000366741 ERCC6Q03468 1493 aa26.85■■□□□ 1.89
MRPL55-214ENST00000366741 NESP48681 1621 aa26.82■■□□□ 1.88
MRPL55-214ENST00000366741 CADPSQ9ULU8 1353 aa26.79■■□□□ 1.88
MRPL55-214ENST00000366741 PDS5BQ9NTI5 1447 aa26.73■■□□□ 1.87
MRPL55-214ENST00000366741 CUX2O14529 1486 aa26.67■■□□□ 1.86
MRPL55-214ENST00000366741 CFTRP13569 1480 aa26.62■■□□□ 1.85
MRPL55-214ENST00000366741 CCDC88BA6NC98 1476 aa26.55■■□□□ 1.84
MRPL55-214ENST00000366741 THOC2Q8NI27 1593 aaKnown RBP26.5■■□□□ 1.83
MRPL55-214ENST00000366741 KIF21AQ7Z4S6 1674 aa26.49■■□□□ 1.83
MRPL55-214ENST00000366741 FANCD2Q9BXW9 1451 aa26.45■■□□□ 1.82
MRPL55-214ENST00000366741 CEP164Q9UPV0 1460 aa26.44■■□□□ 1.82
MRPL55-214ENST00000366741 MRC2Q9UBG0 1479 aa26.42■■□□□ 1.82
MRPL55-214ENST00000366741 WDR62O43379 1518 aa26.34■■□□□ 1.81
MRPL55-214ENST00000366741 PRDM2Q13029 1718 aa26.33■■□□□ 1.81
MRPL55-214ENST00000366741 SUPT5HO00267 1087 aaKnown RBP26.28■■□□□ 1.8
MRPL55-214ENST00000366741 URB2Q14146 1524 aaKnown RBP26.15■■□□□ 1.78
MRPL55-214ENST00000366741 ABCC8Q09428 1581 aa26.12■■□□□ 1.77
MRPL55-214ENST00000366741 TOPBP1Q92547 1522 aa26.01■■□□□ 1.75
MRPL55-214ENST00000366741 DNMBPQ6XZF7 1577 aa25.99■■□□□ 1.75
MRPL55-214ENST00000366741 IFT140Q96RY7 1462 aa25.92■■□□□ 1.74
MRPL55-214ENST00000366741 DNAJC5Q9H3Z4 198 aa25.87■■□□□ 1.73
MRPL55-214ENST00000366741 POLA1P09884 1462 aaPredicted RBP25.79■■□□□ 1.72
MRPL55-214ENST00000366741 CUX1P39880 1505 aa25.75■■□□□ 1.71
MRPL55-214ENST00000366741 TARBP1Q13395 1621 aaKnown RBP25.7■■□□□ 1.71
MRPL55-214ENST00000366741 FGD5Q6ZNL6 1462 aa25.7■■□□□ 1.7
MRPL55-214ENST00000366741 ZNF608Q9ULD9 1512 aaPredicted RBP25.69■■□□□ 1.7
MRPL55-214ENST00000366741 SOGA1O94964 1423 aa25.69■■□□□ 1.7
MRPL55-214ENST00000366741 WDR97A6NE52 1622 aa25.64■■□□□ 1.7
MRPL55-214ENST00000366741 EIF4G3O43432 1585 aaKnown RBP25.62■■□□□ 1.69
MRPL55-214ENST00000366741 WRNQ14191 1432 aaPredicted RBP eCLIP25.62■■□□□ 1.69
MRPL55-214ENST00000366741 RAD54L2Q9Y4B4 1467 aa25.6■■□□□ 1.69
MRPL55-214ENST00000366741 AQRO60306 1485 aaKnown RBP eCLIP25.55■■□□□ 1.688e-7■■■■■ 27.9
MRPL55-214ENST00000366741 TOP2BQ02880 1626 aa25.55■■□□□ 1.68
MRPL55-214ENST00000366741 BIVM-ERCC5R4GMW8 1640 aa25.53■■□□□ 1.68
MRPL55-214ENST00000366741 ABCA10Q8WWZ4 1543 aa25.51■■□□□ 1.67
MRPL55-214ENST00000366741 OSCARQ8IYS5 282 aa25.5■■□□□ 1.67
MRPL55-214ENST00000366741 TDRD9Q8NDG6 1382 aaKnown RBP25.5■■□□□ 1.67
MRPL55-214ENST00000366741 SYNJ1O43426 1573 aa25.47■■□□□ 1.67
MRPL55-214ENST00000366741 GRIN2BQ13224 1484 aa25.43■■□□□ 1.66
MRPL55-214ENST00000366741 GAPVD1Q14C86 1478 aa25.4■■□□□ 1.66
MRPL55-214ENST00000366741 MAGI1Q96QZ7 1491 aaPredicted RBP25.4■■□□□ 1.66
MRPL55-214ENST00000366741 ABCA5Q8WWZ7 1642 aa25.36■■□□□ 1.65
MRPL55-214ENST00000366741 SNAPC4Q5SXM2 1469 aa25.34■■□□□ 1.65
MRPL55-214ENST00000366741 SYNJ2O15056 1496 aa25.28■■□□□ 1.64
MRPL55-214ENST00000366741 PBRM1Q86U86 1689 aa25.26■■□□□ 1.63
MRPL55-214ENST00000366741 FBLN2P98095 1184 aa25.25■■□□□ 1.63
MRPL55-214ENST00000366741 CHD1O14646 1710 aa25.24■■□□□ 1.63
MRPL55-214ENST00000366741 CHMP7Q8WUX9 453 aaPredicted RBP25.23■■□□□ 1.63
MRPL55-214ENST00000366741 ERICH3Q5RHP9 1530 aa25.21■■□□□ 1.63
MRPL55-214ENST00000366741 FHAD1B1AJZ9 1412 aa25.13■■□□□ 1.61
MRPL55-214ENST00000366741 ADAMTS12P58397 1594 aa25.13■■□□□ 1.61
MRPL55-214ENST00000366741 KIF27Q86VH2 1401 aa25.12■■□□□ 1.61
MRPL55-214ENST00000366741 GRIN2AQ12879 1464 aa25.09■■□□□ 1.61
MRPL55-214ENST00000366741 CLASP1Q7Z460 1538 aa25.08■■□□□ 1.61
MRPL55-214ENST00000366741 ARHGEF11O15085 1522 aa25.06■■□□□ 1.6
MRPL55-214ENST00000366741 RIMBP3CA6NJZ7 1639 aa25.01■■□□□ 1.59
MRPL55-214ENST00000366741 RIMBP3BA6NNM3 1639 aa25.01■■□□□ 1.59
MRPL55-214ENST00000366741 RIMBP3Q9UFD9 1639 aa25.01■■□□□ 1.59
MRPL55-214ENST00000366741 NUP160Q12769 1436 aa25■■□□□ 1.59
MRPL55-214ENST00000366741 IGF1RP08069 1367 aa24.97■■□□□ 1.59
MRPL55-214ENST00000366741 CUL7Q14999 1698 aa24.94■■□□□ 1.58
MRPL55-214ENST00000366741 TRIM41Q8WV44 630 aa24.91■■□□□ 1.58
MRPL55-214ENST00000366741 CEP170Q5SW79 1584 aa24.9■■□□□ 1.58
MRPL55-214ENST00000366741 CARMIL1Q5VZK9 1371 aa24.84■■□□□ 1.57
MRPL55-214ENST00000366741 ARAP1Q96P48 1450 aa24.83■■□□□ 1.57
MRPL55-214ENST00000366741 CYB5RLQ6IPT4 315 aa24.78■■□□□ 1.56
MRPL55-214ENST00000366741 SHROOM2Q13796 1616 aa24.78■■□□□ 1.56
MRPL55-214ENST00000366741 RUSC2Q8N2Y8 1516 aa24.76■■□□□ 1.55
MRPL55-214ENST00000366741 KIAA0586Q9BVV6 1533 aa24.75■■□□□ 1.55
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms