RNA–Protein interactions for RNA: ENST00000366684.7

ACTA1-202, Transcript of actin, alpha 1, skeletal muscle, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ACTA1, Length 1,491 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTA1-202ENST00000366684 NISCHQ9Y2I1 1504 aa35.72■■■■□ 3.31
ACTA1-202ENST00000366684 CCDC180Q9P1Z9 1646 aa31.8■■■□□ 2.68
ACTA1-202ENST00000366684 ABCC9O60706 1549 aa31.11■■■□□ 2.57
ACTA1-202ENST00000366684 RB1CC1Q8TDY2 1594 aa29.93■■■□□ 2.38
ACTA1-202ENST00000366684 NACADO15069 1562 aa29.89■■■□□ 2.38
ACTA1-202ENST00000366684 DCAF8L2P0C7V8 631 aa29.8■■■□□ 2.36
ACTA1-202ENST00000366684 ZCCHC6Q5VYS8 1495 aaKnown RBP29.76■■■□□ 2.35
ACTA1-202ENST00000366684 MYO15BQ96JP2 1530 aa29.72■■■□□ 2.35
ACTA1-202ENST00000366684 DCAF1Q9Y4B6 1507 aa29.57■■■□□ 2.32
ACTA1-202ENST00000366684 UNC13AQ9UPW8 1703 aa29.27■■■□□ 2.28
ACTA1-202ENST00000366684 PABPN1Q86U42 306 aaKnown RBP eCLIP29.04■■■□□ 2.24
ACTA1-202ENST00000366684 BICRAQ9NZM4 1560 aa29.03■■■□□ 2.24
ACTA1-202ENST00000366684 SCRIBQ14160 1630 aa28.99■■■□□ 2.23
ACTA1-202ENST00000366684 SHROOM4Q9ULL8 1493 aa28.74■■■□□ 2.19
ACTA1-202ENST00000366684 DNAJC5BQ9UF47 199 aa28.56■■■□□ 2.16
ACTA1-202ENST00000366684 EIF4G1Q04637 1599 aaKnown RBP28.26■■■□□ 2.12
ACTA1-202ENST00000366684 CC2D2AQ9P2K1 1620 aa28.15■■■□□ 2.1
ACTA1-202ENST00000366684 CECR2Q9BXF3 1484 aa27.96■■■□□ 2.07
ACTA1-202ENST00000366684 SMARCA4P51532 1647 aa27.74■■■□□ 2.03
ACTA1-202ENST00000366684 BAZ1AQ9NRL2 1556 aaPredicted RBP27.7■■■□□ 2.02
ACTA1-202ENST00000366684 ATAD2BQ9ULI0 1458 aa27.58■■■□□ 2.01
ACTA1-202ENST00000366684 NCAPD3P42695 1498 aa27.57■■■□□ 2
ACTA1-202ENST00000366684 SMARCA2P51531 1590 aa27.56■■■□□ 2
ACTA1-202ENST00000366684 MROH2BQ7Z745 1585 aa27.53■■■□□ 2
ACTA1-202ENST00000366684 PEG3Q9GZU2 1588 aa27.47■■□□□ 1.99
ACTA1-202ENST00000366684 HMGXB3Q12766 1538 aa27.46■■□□□ 1.99
ACTA1-202ENST00000366684 BAZ1BQ9UIG0 1483 aaKnown RBP27.36■■□□□ 1.97
ACTA1-202ENST00000366684 WIZO95785 1651 aa27.23■■□□□ 1.95
ACTA1-202ENST00000366684 RSF1Q96T23 1441 aaPredicted RBP27.2■■□□□ 1.94
ACTA1-202ENST00000366684 TOP2AP11388 1531 aaKnown RBP26.95■■□□□ 1.9
ACTA1-202ENST00000366684 NESP48681 1621 aa26.91■■□□□ 1.9
ACTA1-202ENST00000366684 LAMC3Q9Y6N6 1575 aa26.86■■□□□ 1.89
ACTA1-202ENST00000366684 ERCC6Q03468 1493 aa26.82■■□□□ 1.88
ACTA1-202ENST00000366684 CADPSQ9ULU8 1353 aa26.76■■□□□ 1.87
ACTA1-202ENST00000366684 PDS5BQ9NTI5 1447 aa26.67■■□□□ 1.86
ACTA1-202ENST00000366684 CCDC88BA6NC98 1476 aa26.62■■□□□ 1.85
ACTA1-202ENST00000366684 KIF21AQ7Z4S6 1674 aa26.61■■□□□ 1.85
ACTA1-202ENST00000366684 CFTRP13569 1480 aa26.61■■□□□ 1.85
ACTA1-202ENST00000366684 CUX2O14529 1486 aa26.56■■□□□ 1.84
ACTA1-202ENST00000366684 THOC2Q8NI27 1593 aaKnown RBP26.54■■□□□ 1.84
ACTA1-202ENST00000366684 FANCD2Q9BXW9 1451 aa26.46■■□□□ 1.83
ACTA1-202ENST00000366684 SUPT5HO00267 1087 aaKnown RBP26.44■■□□□ 1.82
ACTA1-202ENST00000366684 PRDM2Q13029 1718 aa26.43■■□□□ 1.82
ACTA1-202ENST00000366684 CEP164Q9UPV0 1460 aa26.43■■□□□ 1.82
ACTA1-202ENST00000366684 MRC2Q9UBG0 1479 aa26.4■■□□□ 1.82
ACTA1-202ENST00000366684 WDR62O43379 1518 aa26.33■■□□□ 1.81
ACTA1-202ENST00000366684 URB2Q14146 1524 aaKnown RBP26.2■■□□□ 1.78
ACTA1-202ENST00000366684 TOPBP1Q92547 1522 aa26.04■■□□□ 1.76
ACTA1-202ENST00000366684 ABCC8Q09428 1581 aa26.03■■□□□ 1.76
ACTA1-202ENST00000366684 DNMBPQ6XZF7 1577 aa26.02■■□□□ 1.76
ACTA1-202ENST00000366684 IFT140Q96RY7 1462 aa25.88■■□□□ 1.73
ACTA1-202ENST00000366684 CUX1P39880 1505 aa25.84■■□□□ 1.73
ACTA1-202ENST00000366684 POLA1P09884 1462 aaPredicted RBP25.82■■□□□ 1.72
ACTA1-202ENST00000366684 TARBP1Q13395 1621 aaKnown RBP25.77■■□□□ 1.72
ACTA1-202ENST00000366684 ZNF608Q9ULD9 1512 aaPredicted RBP25.76■■□□□ 1.71
ACTA1-202ENST00000366684 DNAJC5Q9H3Z4 198 aa25.75■■□□□ 1.71
ACTA1-202ENST00000366684 FGD5Q6ZNL6 1462 aa25.74■■□□□ 1.71
ACTA1-202ENST00000366684 SOGA1O94964 1423 aa25.69■■□□□ 1.7
ACTA1-202ENST00000366684 RAD54L2Q9Y4B4 1467 aa25.69■■□□□ 1.7
ACTA1-202ENST00000366684 EIF4G3O43432 1585 aaKnown RBP25.67■■□□□ 1.7
ACTA1-202ENST00000366684 WRNQ14191 1432 aaPredicted RBP eCLIP25.65■■□□□ 1.7
ACTA1-202ENST00000366684 TOP2BQ02880 1626 aa25.61■■□□□ 1.69
ACTA1-202ENST00000366684 BIVM-ERCC5R4GMW8 1640 aa25.61■■□□□ 1.69
ACTA1-202ENST00000366684 AQRO60306 1485 aaKnown RBP eCLIP25.61■■□□□ 1.69
ACTA1-202ENST00000366684 SYNJ1O43426 1573 aa25.6■■□□□ 1.69
ACTA1-202ENST00000366684 WDR97A6NE52 1622 aa25.57■■□□□ 1.68
ACTA1-202ENST00000366684 TDRD9Q8NDG6 1382 aaKnown RBP25.55■■□□□ 1.68
ACTA1-202ENST00000366684 ABCA10Q8WWZ4 1543 aa25.5■■□□□ 1.67
ACTA1-202ENST00000366684 ABCA5Q8WWZ7 1642 aa25.42■■□□□ 1.66
ACTA1-202ENST00000366684 OSCARQ8IYS5 282 aa25.41■■□□□ 1.66
ACTA1-202ENST00000366684 GRIN2BQ13224 1484 aa25.4■■□□□ 1.66
ACTA1-202ENST00000366684 GAPVD1Q14C86 1478 aa25.4■■□□□ 1.66
ACTA1-202ENST00000366684 SNAPC4Q5SXM2 1469 aa25.37■■□□□ 1.65
ACTA1-202ENST00000366684 PBRM1Q86U86 1689 aa25.37■■□□□ 1.65
ACTA1-202ENST00000366684 CHD1O14646 1710 aa25.36■■□□□ 1.65
ACTA1-202ENST00000366684 MAGI1Q96QZ7 1491 aaPredicted RBP25.35■■□□□ 1.65
ACTA1-202ENST00000366684 FBLN2P98095 1184 aa25.28■■□□□ 1.64
ACTA1-202ENST00000366684 SYNJ2O15056 1496 aa25.26■■□□□ 1.63
ACTA1-202ENST00000366684 CHMP7Q8WUX9 453 aaPredicted RBP25.21■■□□□ 1.63
ACTA1-202ENST00000366684 ERICH3Q5RHP9 1530 aa25.2■■□□□ 1.62
ACTA1-202ENST00000366684 ADAMTS12P58397 1594 aa25.18■■□□□ 1.62
ACTA1-202ENST00000366684 FHAD1B1AJZ9 1412 aa25.11■■□□□ 1.61
ACTA1-202ENST00000366684 KIF27Q86VH2 1401 aa25.11■■□□□ 1.61
ACTA1-202ENST00000366684 CLASP1Q7Z460 1538 aa25.08■■□□□ 1.61
ACTA1-202ENST00000366684 GRIN2AQ12879 1464 aa25.08■■□□□ 1.61
ACTA1-202ENST00000366684 RIMBP3CA6NJZ7 1639 aa25.05■■□□□ 1.6
ACTA1-202ENST00000366684 RIMBP3BA6NNM3 1639 aa25.05■■□□□ 1.6
ACTA1-202ENST00000366684 RIMBP3Q9UFD9 1639 aa25.05■■□□□ 1.6
ACTA1-202ENST00000366684 ARHGEF11O15085 1522 aa25.04■■□□□ 1.6
ACTA1-202ENST00000366684 IGF1RP08069 1367 aa25.01■■□□□ 1.59
ACTA1-202ENST00000366684 TRIM41Q8WV44 630 aa24.99■■□□□ 1.59
ACTA1-202ENST00000366684 NUP160Q12769 1436 aa24.98■■□□□ 1.59
ACTA1-202ENST00000366684 CUL7Q14999 1698 aa24.97■■□□□ 1.59
ACTA1-202ENST00000366684 CEP170Q5SW79 1584 aa24.97■■□□□ 1.59
ACTA1-202ENST00000366684 RUSC2Q8N2Y8 1516 aa24.87■■□□□ 1.57
ACTA1-202ENST00000366684 CARMIL1Q5VZK9 1371 aa24.85■■□□□ 1.57
ACTA1-202ENST00000366684 ARAP1Q96P48 1450 aa24.84■■□□□ 1.57
ACTA1-202ENST00000366684 SHROOM2Q13796 1616 aa24.81■■□□□ 1.56
ACTA1-202ENST00000366684 CYB5RLQ6IPT4 315 aa24.77■■□□□ 1.56
ACTA1-202ENST00000366684 KIAA0586Q9BVV6 1533 aa24.73■■□□□ 1.55
Retrieved 100 of 20,778 RNA–protein pairs in 99.8 ms