RNA–Protein interactions for RNA: ENST00000365525.1

RN7SKP1-201, Transcript of RNA, 7SK small nuclear pseudogene 1, humanhuman

BASIC

Gene RN7SKP1, Length 307 nt, Biotype misc RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RN7SKP1-201ENST00000365525 NISCHQ9Y2I1 1504 aa19.73■□□□□ 0.75
RN7SKP1-201ENST00000365525 ABCC9O60706 1549 aa18.07■□□□□ 0.48
RN7SKP1-201ENST00000365525 CCDC180Q9P1Z9 1646 aa17.89■□□□□ 0.45
RN7SKP1-201ENST00000365525 DNAJC5BQ9UF47 199 aa17.24■□□□□ 0.35
RN7SKP1-201ENST00000365525 RB1CC1Q8TDY2 1594 aa17.15■□□□□ 0.34
RN7SKP1-201ENST00000365525 NACADO15069 1562 aa16.99■□□□□ 0.31
RN7SKP1-201ENST00000365525 MYO15BQ96JP2 1530 aa16.74■□□□□ 0.27
RN7SKP1-201ENST00000365525 PABPN1Q86U42 306 aaKnown RBP eCLIP16.72■□□□□ 0.27
RN7SKP1-201ENST00000365525 UNC13AQ9UPW8 1703 aa16.67■□□□□ 0.26
RN7SKP1-201ENST00000365525 BICRAQ9NZM4 1560 aa16.65■□□□□ 0.26
RN7SKP1-201ENST00000365525 DCAF8L2P0C7V8 631 aa16.59■□□□□ 0.25
RN7SKP1-201ENST00000365525 SHROOM4Q9ULL8 1493 aa16.54■□□□□ 0.24
RN7SKP1-201ENST00000365525 CECR2Q9BXF3 1484 aa16.37■□□□□ 0.21
RN7SKP1-201ENST00000365525 DCAF1Q9Y4B6 1507 aa16.37■□□□□ 0.21
RN7SKP1-201ENST00000365525 CC2D2AQ9P2K1 1620 aa16.35■□□□□ 0.21
RN7SKP1-201ENST00000365525 ZCCHC6Q5VYS8 1495 aaKnown RBP16.29■□□□□ 0.2
RN7SKP1-201ENST00000365525 EIF4G1Q04637 1599 aaKnown RBP16.26■□□□□ 0.19
RN7SKP1-201ENST00000365525 DNAJC5Q9H3Z4 198 aa16.16■□□□□ 0.18
RN7SKP1-201ENST00000365525 SCRIBQ14160 1630 aa16.14■□□□□ 0.17
RN7SKP1-201ENST00000365525 CUX2O14529 1486 aa15.84■□□□□ 0.13
RN7SKP1-201ENST00000365525 NCAPD3P42695 1498 aa15.7■□□□□ 0.1
RN7SKP1-201ENST00000365525 ERCC6Q03468 1493 aa15.65■□□□□ 0.1
RN7SKP1-201ENST00000365525 AEBP2Q6ZN18 517 aaPredicted RBP15.59■□□□□ 0.09
RN7SKP1-201ENST00000365525 HMGXB3Q12766 1538 aa15.55■□□□□ 0.08
RN7SKP1-201ENST00000365525 ATAD2BQ9ULI0 1458 aa15.55■□□□□ 0.08
RN7SKP1-201ENST00000365525 SMARCA2P51531 1590 aa15.53■□□□□ 0.08
RN7SKP1-201ENST00000365525 SMARCA4P51532 1647 aa15.43■□□□□ 0.06
RN7SKP1-201ENST00000365525 NESP48681 1621 aa15.43■□□□□ 0.06
RN7SKP1-201ENST00000365525 THOC2Q8NI27 1593 aaKnown RBP15.41■□□□□ 0.06
RN7SKP1-201ENST00000365525 PEG3Q9GZU2 1588 aa15.37■□□□□ 0.05
RN7SKP1-201ENST00000365525 LAMC3Q9Y6N6 1575 aa15.37■□□□□ 0.05
RN7SKP1-201ENST00000365525 BAZ1BQ9UIG0 1483 aaKnown RBP15.36■□□□□ 0.05
RN7SKP1-201ENST00000365525 BAZ1AQ9NRL2 1556 aaPredicted RBP15.35■□□□□ 0.05
RN7SKP1-201ENST00000365525 CHIC1Q5VXU3 224 aa15.31■□□□□ 0.04
RN7SKP1-201ENST00000365525 PDS5BQ9NTI5 1447 aa15.29■□□□□ 0.04
RN7SKP1-201ENST00000365525 KIF21AQ7Z4S6 1674 aa15.22■□□□□ 0.03
RN7SKP1-201ENST00000365525 CADPSQ9ULU8 1353 aa15.16■□□□□ 0.02
RN7SKP1-201ENST00000365525 TRIM41Q8WV44 630 aa15.16■□□□□ 0.02
RN7SKP1-201ENST00000365525 WDR62O43379 1518 aa15.16■□□□□ 0.02
RN7SKP1-201ENST00000365525 MRC2Q9UBG0 1479 aa15.15■□□□□ 0.02
RN7SKP1-201ENST00000365525 MROH2BQ7Z745 1585 aa15.15■□□□□ 0.02
RN7SKP1-201ENST00000365525 CEP164Q9UPV0 1460 aa15.02■□□□□ -0
RN7SKP1-201ENST00000365525 OSCARQ8IYS5 282 aa14.98□□□□□ -0.01
RN7SKP1-201ENST00000365525 FANCD2Q9BXW9 1451 aa14.96□□□□□ -0.01
RN7SKP1-201ENST00000365525 CFTRP13569 1480 aa14.95□□□□□ -0.02
RN7SKP1-201ENST00000365525 WIZO95785 1651 aa14.91□□□□□ -0.02
RN7SKP1-201ENST00000365525 URB2Q14146 1524 aaKnown RBP14.86□□□□□ -0.03
RN7SKP1-201ENST00000365525 RIMBP3CA6NJZ7 1639 aa14.81□□□□□ -0.04
RN7SKP1-201ENST00000365525 RIMBP3BA6NNM3 1639 aa14.81□□□□□ -0.04
RN7SKP1-201ENST00000365525 RIMBP3Q9UFD9 1639 aa14.81□□□□□ -0.04
RN7SKP1-201ENST00000365525 TOP2AP11388 1531 aaKnown RBP14.78□□□□□ -0.04
RN7SKP1-201ENST00000365525 ARHGEF11O15085 1522 aa14.76□□□□□ -0.05
RN7SKP1-201ENST00000365525 IFT140Q96RY7 1462 aa14.76□□□□□ -0.05
RN7SKP1-201ENST00000365525 RSF1Q96T23 1441 aaPredicted RBP14.74□□□□□ -0.05
RN7SKP1-201ENST00000365525 PRDM2Q13029 1718 aa14.72□□□□□ -0.05
RN7SKP1-201ENST00000365525 ZNF608Q9ULD9 1512 aaPredicted RBP14.7□□□□□ -0.06
RN7SKP1-201ENST00000365525 ABCC8Q09428 1581 aa14.66□□□□□ -0.06
RN7SKP1-201ENST00000365525 TOPBP1Q92547 1522 aa14.65□□□□□ -0.06
RN7SKP1-201ENST00000365525 EIF4G3O43432 1585 aaKnown RBP14.63□□□□□ -0.07
RN7SKP1-201ENST00000365525 CYB5RLQ6IPT4 315 aa14.6□□□□□ -0.07
RN7SKP1-201ENST00000365525 CCDC88BA6NC98 1476 aa14.58□□□□□ -0.08
RN7SKP1-201ENST00000365525 ARAP1Q96P48 1450 aa14.58□□□□□ -0.08
RN7SKP1-201ENST00000365525 DNMBPQ6XZF7 1577 aa14.58□□□□□ -0.08
RN7SKP1-201ENST00000365525 TARBP1Q13395 1621 aaKnown RBP14.55□□□□□ -0.08
RN7SKP1-201ENST00000365525 CHD1O14646 1710 aa14.53□□□□□ -0.08
RN7SKP1-201ENST00000365525 AQRO60306 1485 aaKnown RBP eCLIP14.51□□□□□ -0.09
RN7SKP1-201ENST00000365525 TRHP20396 242 aaPredicted RBP14.51□□□□□ -0.09
RN7SKP1-201ENST00000365525 POLA1P09884 1462 aaPredicted RBP14.48□□□□□ -0.09
RN7SKP1-201ENST00000365525 WDR97A6NE52 1622 aa14.48□□□□□ -0.09
RN7SKP1-201ENST00000365525 CLASP1Q7Z460 1538 aa14.45□□□□□ -0.1
RN7SKP1-201ENST00000365525 FBLN2P98095 1184 aa14.42□□□□□ -0.1
RN7SKP1-201ENST00000365525 MAGI1Q96QZ7 1491 aaPredicted RBP14.4□□□□□ -0.1
RN7SKP1-201ENST00000365525 SYNJ1O43426 1573 aa14.39□□□□□ -0.11
RN7SKP1-201ENST00000365525 SOGA1O94964 1423 aa14.39□□□□□ -0.11
RN7SKP1-201ENST00000365525 SNAPC4Q5SXM2 1469 aa14.38□□□□□ -0.11
RN7SKP1-201ENST00000365525 RAD54L2Q9Y4B4 1467 aa14.38□□□□□ -0.11
RN7SKP1-201ENST00000365525 TDRD9Q8NDG6 1382 aaKnown RBP14.37□□□□□ -0.11
RN7SKP1-201ENST00000365525 SYNJ2O15056 1496 aa14.34□□□□□ -0.11
RN7SKP1-201ENST00000365525 GRIN2BQ13224 1484 aa14.34□□□□□ -0.11
RN7SKP1-201ENST00000365525 CHMP7Q8WUX9 453 aaPredicted RBP14.32□□□□□ -0.12
RN7SKP1-201ENST00000365525 FGD5Q6ZNL6 1462 aa14.31□□□□□ -0.12
RN7SKP1-201ENST00000365525 GAPVD1Q14C86 1478 aa14.28□□□□□ -0.12
RN7SKP1-201ENST00000365525 CUX1P39880 1505 aa14.26□□□□□ -0.13
RN7SKP1-201ENST00000365525 PBRM1Q86U86 1689 aa14.2□□□□□ -0.14
RN7SKP1-201ENST00000365525 ABCA10Q8WWZ4 1543 aa14.2□□□□□ -0.14
RN7SKP1-201ENST00000365525 ABCA5Q8WWZ7 1642 aa14.19□□□□□ -0.14
RN7SKP1-201ENST00000365525 GRIN2AQ12879 1464 aa14.14□□□□□ -0.15
RN7SKP1-201ENST00000365525 NUP160Q12769 1436 aa14.14□□□□□ -0.15
RN7SKP1-201ENST00000365525 SHROOM2Q13796 1616 aa14.12□□□□□ -0.15
RN7SKP1-201ENST00000365525 CEP170Q5SW79 1584 aa14.11□□□□□ -0.15
RN7SKP1-201ENST00000365525 ERCC6L2Q5T890 1561 aa14.11□□□□□ -0.15
RN7SKP1-201ENST00000365525 ADAMTS12P58397 1594 aa14.09□□□□□ -0.15
RN7SKP1-201ENST00000365525 FHAD1B1AJZ9 1412 aa14.06□□□□□ -0.16
RN7SKP1-201ENST00000365525 WRNQ14191 1432 aaPredicted RBP eCLIP14.06□□□□□ -0.16
RN7SKP1-201ENST00000365525 KIF13AQ9H1H9 1805 aa14.03□□□□□ -0.16
RN7SKP1-201ENST00000365525 ERICH3Q5RHP9 1530 aa14.02□□□□□ -0.16
RN7SKP1-201ENST00000365525 ABCC10Q5T3U5 1492 aa13.99□□□□□ -0.17
RN7SKP1-201ENST00000365525 MAPKBP1O60336 1514 aa13.98□□□□□ -0.17
RN7SKP1-201ENST00000365525 TOP2BQ02880 1626 aa13.97□□□□□ -0.17
RN7SKP1-201ENST00000365525 BIVM-ERCC5R4GMW8 1640 aa13.97□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms