RNA–Protein interactions for RNA: ENST00000364525.1

RN7SKP257-201, Transcript of RNA, 7SK small nuclear pseudogene 257, humanhuman

BASIC

Gene RN7SKP257, Length 309 nt, Biotype misc RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RN7SKP257-201ENST00000364525 NISCHQ9Y2I1 1504 aa19.36■□□□□ 0.69
RN7SKP257-201ENST00000364525 ABCC9O60706 1549 aa18.59■□□□□ 0.57
RN7SKP257-201ENST00000364525 DNAJC5BQ9UF47 199 aa18.17■□□□□ 0.5
RN7SKP257-201ENST00000364525 CCDC180Q9P1Z9 1646 aa17.73■□□□□ 0.43
RN7SKP257-201ENST00000364525 RB1CC1Q8TDY2 1594 aa17.28■□□□□ 0.36
RN7SKP257-201ENST00000364525 DNAJC5Q9H3Z4 198 aa17.24■□□□□ 0.35
RN7SKP257-201ENST00000364525 PABPN1Q86U42 306 aaKnown RBP eCLIP17.19■□□□□ 0.34
RN7SKP257-201ENST00000364525 UNC13AQ9UPW8 1703 aa16.99■□□□□ 0.31
RN7SKP257-201ENST00000364525 NACADO15069 1562 aa16.94■□□□□ 0.3
RN7SKP257-201ENST00000364525 BICRAQ9NZM4 1560 aa16.82■□□□□ 0.28
RN7SKP257-201ENST00000364525 DCAF8L2P0C7V8 631 aa16.82■□□□□ 0.28
RN7SKP257-201ENST00000364525 CECR2Q9BXF3 1484 aa16.8■□□□□ 0.28
RN7SKP257-201ENST00000364525 CC2D2AQ9P2K1 1620 aa16.74■□□□□ 0.27
RN7SKP257-201ENST00000364525 EIF4G1Q04637 1599 aaKnown RBP16.47■□□□□ 0.23
RN7SKP257-201ENST00000364525 SHROOM4Q9ULL8 1493 aa16.41■□□□□ 0.22
RN7SKP257-201ENST00000364525 MYO15BQ96JP2 1530 aa16.38■□□□□ 0.21
RN7SKP257-201ENST00000364525 CUX2O14529 1486 aa16.28■□□□□ 0.2
RN7SKP257-201ENST00000364525 TRIM41Q8WV44 630 aa16.22■□□□□ 0.19
RN7SKP257-201ENST00000364525 SCRIBQ14160 1630 aa16.16■□□□□ 0.18
RN7SKP257-201ENST00000364525 ERCC6Q03468 1493 aa16.09■□□□□ 0.17
RN7SKP257-201ENST00000364525 DCAF1Q9Y4B6 1507 aa15.89■□□□□ 0.13
RN7SKP257-201ENST00000364525 ZCCHC6Q5VYS8 1495 aaKnown RBP15.85■□□□□ 0.13
RN7SKP257-201ENST00000364525 NESP48681 1621 aa15.73■□□□□ 0.11
RN7SKP257-201ENST00000364525 THOC2Q8NI27 1593 aaKnown RBP15.7■□□□□ 0.1
RN7SKP257-201ENST00000364525 NCAPD3P42695 1498 aa15.64■□□□□ 0.09
RN7SKP257-201ENST00000364525 SMARCA2P51531 1590 aa15.58■□□□□ 0.08
RN7SKP257-201ENST00000364525 KIF21AQ7Z4S6 1674 aa15.53■□□□□ 0.08
RN7SKP257-201ENST00000364525 ATAD2BQ9ULI0 1458 aa15.51■□□□□ 0.07
RN7SKP257-201ENST00000364525 BAZ1AQ9NRL2 1556 aaPredicted RBP15.48■□□□□ 0.07
RN7SKP257-201ENST00000364525 HMGXB3Q12766 1538 aa15.45■□□□□ 0.06
RN7SKP257-201ENST00000364525 OSCARQ8IYS5 282 aa15.45■□□□□ 0.06
RN7SKP257-201ENST00000364525 AEBP2Q6ZN18 517 aaPredicted RBP15.44■□□□□ 0.06
RN7SKP257-201ENST00000364525 LAMC3Q9Y6N6 1575 aa15.44■□□□□ 0.06
RN7SKP257-201ENST00000364525 PDS5BQ9NTI5 1447 aa15.37■□□□□ 0.05
RN7SKP257-201ENST00000364525 RIMBP3CA6NJZ7 1639 aa15.36■□□□□ 0.05
RN7SKP257-201ENST00000364525 RIMBP3BA6NNM3 1639 aa15.36■□□□□ 0.05
RN7SKP257-201ENST00000364525 RIMBP3Q9UFD9 1639 aa15.36■□□□□ 0.05
RN7SKP257-201ENST00000364525 BAZ1BQ9UIG0 1483 aaKnown RBP15.32■□□□□ 0.04
RN7SKP257-201ENST00000364525 SMARCA4P51532 1647 aa15.3■□□□□ 0.04
RN7SKP257-201ENST00000364525 MRC2Q9UBG0 1479 aa15.29■□□□□ 0.04
RN7SKP257-201ENST00000364525 TRHP20396 242 aaPredicted RBP15.29■□□□□ 0.04
RN7SKP257-201ENST00000364525 WDR62O43379 1518 aa15.27■□□□□ 0.04
RN7SKP257-201ENST00000364525 ARHGEF11O15085 1522 aa15.2■□□□□ 0.02
RN7SKP257-201ENST00000364525 CYB5RLQ6IPT4 315 aa15.18■□□□□ 0.02
RN7SKP257-201ENST00000364525 CADPSQ9ULU8 1353 aa15.14■□□□□ 0.01
RN7SKP257-201ENST00000364525 PEG3Q9GZU2 1588 aa15.11■□□□□ 0.01
RN7SKP257-201ENST00000364525 CEP164Q9UPV0 1460 aa15.08■□□□□ 0
RN7SKP257-201ENST00000364525 FANCD2Q9BXW9 1451 aa15□□□□□ -0.01
RN7SKP257-201ENST00000364525 ARAP1Q96P48 1450 aa14.99□□□□□ -0.01
RN7SKP257-201ENST00000364525 MROH2BQ7Z745 1585 aa14.94□□□□□ -0.02
RN7SKP257-201ENST00000364525 URB2Q14146 1524 aaKnown RBP14.93□□□□□ -0.02
RN7SKP257-201ENST00000364525 ILDR1Q86SU0 546 aaPredicted RBP14.92□□□□□ -0.02
RN7SKP257-201ENST00000364525 ZNF608Q9ULD9 1512 aaPredicted RBP14.9□□□□□ -0.02
RN7SKP257-201ENST00000364525 CHD1O14646 1710 aa14.86□□□□□ -0.03
RN7SKP257-201ENST00000364525 RSF1Q96T23 1441 aaPredicted RBP14.8□□□□□ -0.04
RN7SKP257-201ENST00000364525 CFTRP13569 1480 aa14.79□□□□□ -0.04
RN7SKP257-201ENST00000364525 IFT140Q96RY7 1462 aa14.79□□□□□ -0.04
RN7SKP257-201ENST00000364525 FBLN2P98095 1184 aa14.77□□□□□ -0.05
RN7SKP257-201ENST00000364525 EIF4G3O43432 1585 aaKnown RBP14.77□□□□□ -0.05
RN7SKP257-201ENST00000364525 WIZO95785 1651 aa14.76□□□□□ -0.05
RN7SKP257-201ENST00000364525 AQRO60306 1485 aaKnown RBP eCLIP14.66□□□□□ -0.06
RN7SKP257-201ENST00000364525 PRDM2Q13029 1718 aa14.66□□□□□ -0.06
RN7SKP257-201ENST00000364525 TOPBP1Q92547 1522 aa14.62□□□□□ -0.07
RN7SKP257-201ENST00000364525 CLASP1Q7Z460 1538 aa14.6□□□□□ -0.07
RN7SKP257-201ENST00000364525 TARBP1Q13395 1621 aaKnown RBP14.56□□□□□ -0.08
RN7SKP257-201ENST00000364525 SYNJ1O43426 1573 aa14.52□□□□□ -0.08
RN7SKP257-201ENST00000364525 GAPVD1Q14C86 1478 aa14.52□□□□□ -0.08
RN7SKP257-201ENST00000364525 KDM4FA0A1W2PPD8 638 aa14.5□□□□□ -0.09
RN7SKP257-201ENST00000364525 ABCC8Q09428 1581 aa14.5□□□□□ -0.09
RN7SKP257-201ENST00000364525 CHMP7Q8WUX9 453 aaPredicted RBP14.49□□□□□ -0.09
RN7SKP257-201ENST00000364525 KIF13AQ9H1H9 1805 aa14.48□□□□□ -0.09
RN7SKP257-201ENST00000364525 DNMBPQ6XZF7 1577 aa14.48□□□□□ -0.09
RN7SKP257-201ENST00000364525 SNAPC4Q5SXM2 1469 aa14.47□□□□□ -0.09
RN7SKP257-201ENST00000364525 TOP2AP11388 1531 aaKnown RBP14.45□□□□□ -0.1
RN7SKP257-201ENST00000364525 TDRD9Q8NDG6 1382 aaKnown RBP14.45□□□□□ -0.1
RN7SKP257-201ENST00000364525 POLA1P09884 1462 aaPredicted RBP14.41□□□□□ -0.1
RN7SKP257-201ENST00000364525 RAD54L2Q9Y4B4 1467 aa14.41□□□□□ -0.1
RN7SKP257-201ENST00000364525 MAGI1Q96QZ7 1491 aaPredicted RBP14.37□□□□□ -0.11
RN7SKP257-201ENST00000364525 ERCC6L2Q5T890 1561 aa14.36□□□□□ -0.11
RN7SKP257-201ENST00000364525 SOGA1O94964 1423 aa14.34□□□□□ -0.11
RN7SKP257-201ENST00000364525 SYNJ2O15056 1496 aa14.34□□□□□ -0.11
RN7SKP257-201ENST00000364525 CCDC88BA6NC98 1476 aa14.32□□□□□ -0.12
RN7SKP257-201ENST00000364525 WDR97A6NE52 1622 aa14.3□□□□□ -0.12
RN7SKP257-201ENST00000364525 GRIN2BQ13224 1484 aa14.29□□□□□ -0.12
RN7SKP257-201ENST00000364525 KDM6BO15054 1643 aa14.29□□□□□ -0.12
RN7SKP257-201ENST00000364525 FAM69CQ0P6D2 419 aa14.28□□□□□ -0.12
RN7SKP257-201ENST00000364525 HECW2Q9P2P5 1572 aa14.26□□□□□ -0.13
RN7SKP257-201ENST00000364525 PBRM1Q86U86 1689 aa14.24□□□□□ -0.13
RN7SKP257-201ENST00000364525 FBXO41Q8TF61 875 aa14.24□□□□□ -0.13
RN7SKP257-201ENST00000364525 TSPOAP1O95153 1857 aa14.24□□□□□ -0.13
RN7SKP257-201ENST00000364525 CEP170Q5SW79 1584 aa14.22□□□□□ -0.13
RN7SKP257-201ENST00000364525 FGD5Q6ZNL6 1462 aa14.22□□□□□ -0.13
RN7SKP257-201ENST00000364525 ABCC10Q5T3U5 1492 aa14.21□□□□□ -0.13
RN7SKP257-201ENST00000364525 ADGRL1O94910 1474 aa14.18□□□□□ -0.14
RN7SKP257-201ENST00000364525 DIP2BQ9P265 1576 aa14.17□□□□□ -0.14
RN7SKP257-201ENST00000364525 SHROOM2Q13796 1616 aa14.13□□□□□ -0.15
RN7SKP257-201ENST00000364525 LMTK3Q96Q04 1460 aa14.12□□□□□ -0.15
RN7SKP257-201ENST00000364525 NPM1P06748 294 aaKnown RBP eCLIP14.12□□□□□ -0.15
RN7SKP257-201ENST00000364525 GRIN2AQ12879 1464 aa14.12□□□□□ -0.15
RN7SKP257-201ENST00000364525 MAPKBP1O60336 1514 aa14.1□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 11.4 ms