RNA–Protein interactions for RNA: ENST00000363841.1

RNA5SP28-201, Transcript of RNA, 5S ribosomal pseudogene 28, humanhuman

BASIC

Gene RNA5SP28, Length 119 nt, Biotype rRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNA5SP28-201ENST00000363841 NISCHQ9Y2I1 1504 aa11.2□□□□□ -0.62
RNA5SP28-201ENST00000363841 ABCC9O60706 1549 aa10.53□□□□□ -0.72
RNA5SP28-201ENST00000363841 CCDC180Q9P1Z9 1646 aa10.25□□□□□ -0.77
RNA5SP28-201ENST00000363841 DNAJC5BQ9UF47 199 aa10.16□□□□□ -0.78
RNA5SP28-201ENST00000363841 RB1CC1Q8TDY2 1594 aa9.87□□□□□ -0.83
RNA5SP28-201ENST00000363841 DNAJC5Q9H3Z4 198 aa9.86□□□□□ -0.83
RNA5SP28-201ENST00000363841 UNC13AQ9UPW8 1703 aa9.76□□□□□ -0.85
RNA5SP28-201ENST00000363841 NACADO15069 1562 aa9.71□□□□□ -0.86
RNA5SP28-201ENST00000363841 PABPN1Q86U42 306 aaKnown RBP eCLIP9.69□□□□□ -0.86
RNA5SP28-201ENST00000363841 BICRAQ9NZM4 1560 aa9.66□□□□□ -0.86
RNA5SP28-201ENST00000363841 CC2D2AQ9P2K1 1620 aa9.52□□□□□ -0.89
RNA5SP28-201ENST00000363841 CECR2Q9BXF3 1484 aa9.5□□□□□ -0.89
RNA5SP28-201ENST00000363841 DCAF8L2P0C7V8 631 aa9.46□□□□□ -0.9
RNA5SP28-201ENST00000363841 MYO15BQ96JP2 1530 aa9.46□□□□□ -0.9
RNA5SP28-201ENST00000363841 SHROOM4Q9ULL8 1493 aa9.42□□□□□ -0.9
RNA5SP28-201ENST00000363841 EIF4G1Q04637 1599 aaKnown RBP9.41□□□□□ -0.9
RNA5SP28-201ENST00000363841 SCRIBQ14160 1630 aa9.33□□□□□ -0.92
RNA5SP28-201ENST00000363841 ZCCHC6Q5VYS8 1495 aaKnown RBP9.25□□□□□ -0.93
RNA5SP28-201ENST00000363841 DCAF1Q9Y4B6 1507 aa9.22□□□□□ -0.93
RNA5SP28-201ENST00000363841 CUX2O14529 1486 aa9.19□□□□□ -0.94
RNA5SP28-201ENST00000363841 ERCC6Q03468 1493 aa9.08□□□□□ -0.96
RNA5SP28-201ENST00000363841 THOC2Q8NI27 1593 aaKnown RBP9□□□□□ -0.97
RNA5SP28-201ENST00000363841 NESP48681 1621 aa8.98□□□□□ -0.97
RNA5SP28-201ENST00000363841 TRIM41Q8WV44 630 aa8.96□□□□□ -0.98
RNA5SP28-201ENST00000363841 NCAPD3P42695 1498 aa8.95□□□□□ -0.98
RNA5SP28-201ENST00000363841 HMGXB3Q12766 1538 aa8.9□□□□□ -0.98
RNA5SP28-201ENST00000363841 KIF21AQ7Z4S6 1674 aa8.9□□□□□ -0.98
RNA5SP28-201ENST00000363841 SMARCA2P51531 1590 aa8.9□□□□□ -0.99
RNA5SP28-201ENST00000363841 ATAD2BQ9ULI0 1458 aa8.89□□□□□ -0.99
RNA5SP28-201ENST00000363841 AEBP2Q6ZN18 517 aaPredicted RBP8.86□□□□□ -0.99
RNA5SP28-201ENST00000363841 SMARCA4P51532 1647 aa8.85□□□□□ -0.99
RNA5SP28-201ENST00000363841 LAMC3Q9Y6N6 1575 aa8.83□□□□□ -1
RNA5SP28-201ENST00000363841 BAZ1AQ9NRL2 1556 aaPredicted RBP8.81□□□□□ -1
RNA5SP28-201ENST00000363841 BAZ1BQ9UIG0 1483 aaKnown RBP8.79□□□□□ -1
RNA5SP28-201ENST00000363841 PEG3Q9GZU2 1588 aa8.76□□□□□ -1.01
RNA5SP28-201ENST00000363841 WDR62O43379 1518 aa8.75□□□□□ -1.01
RNA5SP28-201ENST00000363841 MRC2Q9UBG0 1479 aa8.74□□□□□ -1.01
RNA5SP28-201ENST00000363841 ILDR1Q86SU0 546 aaPredicted RBP8.73□□□□□ -1.01
RNA5SP28-201ENST00000363841 PDS5BQ9NTI5 1447 aa8.72□□□□□ -1.01
RNA5SP28-201ENST00000363841 RIMBP3CA6NJZ7 1639 aa8.7□□□□□ -1.02
RNA5SP28-201ENST00000363841 RIMBP3BA6NNM3 1639 aa8.7□□□□□ -1.02
RNA5SP28-201ENST00000363841 RIMBP3Q9UFD9 1639 aa8.7□□□□□ -1.02
RNA5SP28-201ENST00000363841 MROH2BQ7Z745 1585 aa8.65□□□□□ -1.02
RNA5SP28-201ENST00000363841 CADPSQ9ULU8 1353 aa8.63□□□□□ -1.03
RNA5SP28-201ENST00000363841 CEP164Q9UPV0 1460 aa8.63□□□□□ -1.03
RNA5SP28-201ENST00000363841 ARHGEF11O15085 1522 aa8.61□□□□□ -1.03
RNA5SP28-201ENST00000363841 OSCARQ8IYS5 282 aa8.61□□□□□ -1.03
RNA5SP28-201ENST00000363841 FANCD2Q9BXW9 1451 aa8.58□□□□□ -1.04
RNA5SP28-201ENST00000363841 URB2Q14146 1524 aaKnown RBP8.57□□□□□ -1.04
RNA5SP28-201ENST00000363841 WIZO95785 1651 aa8.56□□□□□ -1.04
RNA5SP28-201ENST00000363841 ARAP1Q96P48 1450 aa8.52□□□□□ -1.05
RNA5SP28-201ENST00000363841 ZNF608Q9ULD9 1512 aaPredicted RBP8.52□□□□□ -1.05
RNA5SP28-201ENST00000363841 CFTRP13569 1480 aa8.51□□□□□ -1.05
RNA5SP28-201ENST00000363841 CHD1O14646 1710 aa8.5□□□□□ -1.05
RNA5SP28-201ENST00000363841 EIF4G3O43432 1585 aaKnown RBP8.49□□□□□ -1.05
RNA5SP28-201ENST00000363841 PRDM2Q13029 1718 aa8.49□□□□□ -1.05
RNA5SP28-201ENST00000363841 TRHP20396 242 aaPredicted RBP8.46□□□□□ -1.06
RNA5SP28-201ENST00000363841 CYB5RLQ6IPT4 315 aa8.46□□□□□ -1.06
RNA5SP28-201ENST00000363841 IFT140Q96RY7 1462 aa8.45□□□□□ -1.06
RNA5SP28-201ENST00000363841 TOP2AP11388 1531 aaKnown RBP8.4□□□□□ -1.06
RNA5SP28-201ENST00000363841 TOPBP1Q92547 1522 aa8.4□□□□□ -1.06
RNA5SP28-201ENST00000363841 RSF1Q96T23 1441 aaPredicted RBP8.4□□□□□ -1.06
RNA5SP28-201ENST00000363841 TARBP1Q13395 1621 aaKnown RBP8.39□□□□□ -1.07
RNA5SP28-201ENST00000363841 CLASP1Q7Z460 1538 aa8.38□□□□□ -1.07
RNA5SP28-201ENST00000363841 AQRO60306 1485 aaKnown RBP eCLIP8.35□□□□□ -1.07
RNA5SP28-201ENST00000363841 DNMBPQ6XZF7 1577 aa8.35□□□□□ -1.07
RNA5SP28-201ENST00000363841 POLA1P09884 1462 aaPredicted RBP8.29□□□□□ -1.08
RNA5SP28-201ENST00000363841 SNAPC4Q5SXM2 1469 aa8.29□□□□□ -1.08
RNA5SP28-201ENST00000363841 SYNJ1O43426 1573 aa8.28□□□□□ -1.08
RNA5SP28-201ENST00000363841 ABCC8Q09428 1581 aa8.28□□□□□ -1.08
RNA5SP28-201ENST00000363841 FBLN2P98095 1184 aa8.28□□□□□ -1.08
RNA5SP28-201ENST00000363841 CCDC88BA6NC98 1476 aa8.27□□□□□ -1.09
RNA5SP28-201ENST00000363841 RAD54L2Q9Y4B4 1467 aa8.26□□□□□ -1.09
RNA5SP28-201ENST00000363841 GAPVD1Q14C86 1478 aa8.25□□□□□ -1.09
RNA5SP28-201ENST00000363841 KIF13AQ9H1H9 1805 aa8.24□□□□□ -1.09
RNA5SP28-201ENST00000363841 ERCC6L2Q5T890 1561 aa8.24□□□□□ -1.09
RNA5SP28-201ENST00000363841 TDRD9Q8NDG6 1382 aaKnown RBP8.23□□□□□ -1.09
RNA5SP28-201ENST00000363841 WDR97A6NE52 1622 aa8.23□□□□□ -1.09
RNA5SP28-201ENST00000363841 MAGI1Q96QZ7 1491 aaPredicted RBP8.23□□□□□ -1.09
RNA5SP28-201ENST00000363841 PBRM1Q86U86 1689 aa8.22□□□□□ -1.09
RNA5SP28-201ENST00000363841 SYNJ2O15056 1496 aa8.2□□□□□ -1.1
RNA5SP28-201ENST00000363841 SOCS7O14512 581 aa8.2□□□□□ -1.1
RNA5SP28-201ENST00000363841 FGD5Q6ZNL6 1462 aa8.19□□□□□ -1.1
RNA5SP28-201ENST00000363841 SOGA1O94964 1423 aa8.19□□□□□ -1.1
RNA5SP28-201ENST00000363841 GRIN2BQ13224 1484 aa8.18□□□□□ -1.1
RNA5SP28-201ENST00000363841 CUX1P39880 1505 aa8.16□□□□□ -1.1
RNA5SP28-201ENST00000363841 CHMP7Q8WUX9 453 aaPredicted RBP8.16□□□□□ -1.1
RNA5SP28-201ENST00000363841 CEP170Q5SW79 1584 aa8.15□□□□□ -1.1
RNA5SP28-201ENST00000363841 ABCA5Q8WWZ7 1642 aa8.14□□□□□ -1.11
RNA5SP28-201ENST00000363841 SHROOM2Q13796 1616 aa8.14□□□□□ -1.11
RNA5SP28-201ENST00000363841 LMTK3Q96Q04 1460 aa8.12□□□□□ -1.11
RNA5SP28-201ENST00000363841 ADAMTS12P58397 1594 aa8.11□□□□□ -1.11
RNA5SP28-201ENST00000363841 GRIN2AQ12879 1464 aa8.11□□□□□ -1.11
RNA5SP28-201ENST00000363841 KDM4FA0A1W2PPD8 638 aa8.1□□□□□ -1.11
RNA5SP28-201ENST00000363841 DIP2BQ9P265 1576 aa8.1□□□□□ -1.11
RNA5SP28-201ENST00000363841 KDM6BO15054 1643 aa8.09□□□□□ -1.11
RNA5SP28-201ENST00000363841 NUP160Q12769 1436 aa8.09□□□□□ -1.11
RNA5SP28-201ENST00000363841 ABCA10Q8WWZ4 1543 aa8.07□□□□□ -1.12
RNA5SP28-201ENST00000363841 ABCC10Q5T3U5 1492 aa8.06□□□□□ -1.12
RNA5SP28-201ENST00000363841 MAPKBP1O60336 1514 aa8.05□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 7.5 ms