RNA–Protein interactions for RNA: ENST00000363306.1

RNU1-19P-201, Transcript of RNA, U1 small nuclear 19, pseudogene, humanhuman

BASIC

Gene RNU1-19P, Length 165 nt, Biotype snRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU1-19P-201ENST00000363306 NISCHQ9Y2I1 1504 aa13.82□□□□□ -0.2
RNU1-19P-201ENST00000363306 ABCC9O60706 1549 aa13.2□□□□□ -0.3
RNU1-19P-201ENST00000363306 DNAJC5BQ9UF47 199 aa12.88□□□□□ -0.35
RNU1-19P-201ENST00000363306 CCDC180Q9P1Z9 1646 aa12.59□□□□□ -0.39
RNU1-19P-201ENST00000363306 RB1CC1Q8TDY2 1594 aa12.3□□□□□ -0.44
RNU1-19P-201ENST00000363306 PABPN1Q86U42 306 aaKnown RBP eCLIP12.26□□□□□ -0.45
RNU1-19P-201ENST00000363306 DNAJC5Q9H3Z4 198 aa12.24□□□□□ -0.45
RNU1-19P-201ENST00000363306 NACADO15069 1562 aa12.08□□□□□ -0.48
RNU1-19P-201ENST00000363306 DCAF8L2P0C7V8 631 aa12.07□□□□□ -0.48
RNU1-19P-201ENST00000363306 UNC13AQ9UPW8 1703 aa11.95□□□□□ -0.5
RNU1-19P-201ENST00000363306 CECR2Q9BXF3 1484 aa11.95□□□□□ -0.5
RNU1-19P-201ENST00000363306 BICRAQ9NZM4 1560 aa11.92□□□□□ -0.5
RNU1-19P-201ENST00000363306 CC2D2AQ9P2K1 1620 aa11.86□□□□□ -0.51
RNU1-19P-201ENST00000363306 SHROOM4Q9ULL8 1493 aa11.7□□□□□ -0.54
RNU1-19P-201ENST00000363306 MYO15BQ96JP2 1530 aa11.7□□□□□ -0.54
RNU1-19P-201ENST00000363306 EIF4G1Q04637 1599 aaKnown RBP11.69□□□□□ -0.54
RNU1-19P-201ENST00000363306 CUX2O14529 1486 aa11.58□□□□□ -0.56
RNU1-19P-201ENST00000363306 TRIM41Q8WV44 630 aa11.53□□□□□ -0.56
RNU1-19P-201ENST00000363306 SCRIBQ14160 1630 aa11.49□□□□□ -0.57
RNU1-19P-201ENST00000363306 ERCC6Q03468 1493 aa11.46□□□□□ -0.57
RNU1-19P-201ENST00000363306 DCAF1Q9Y4B6 1507 aa11.35□□□□□ -0.59
RNU1-19P-201ENST00000363306 ZCCHC6Q5VYS8 1495 aaKnown RBP11.31□□□□□ -0.6
RNU1-19P-201ENST00000363306 NESP48681 1621 aa11.17□□□□□ -0.62
RNU1-19P-201ENST00000363306 NCAPD3P42695 1498 aa11.16□□□□□ -0.62
RNU1-19P-201ENST00000363306 THOC2Q8NI27 1593 aaKnown RBP11.11□□□□□ -0.63
RNU1-19P-201ENST00000363306 ATAD2BQ9ULI0 1458 aa11.06□□□□□ -0.64
RNU1-19P-201ENST00000363306 SMARCA2P51531 1590 aa11.05□□□□□ -0.64
RNU1-19P-201ENST00000363306 OSCARQ8IYS5 282 aa11.05□□□□□ -0.64
RNU1-19P-201ENST00000363306 AEBP2Q6ZN18 517 aaPredicted RBP11.03□□□□□ -0.64
RNU1-19P-201ENST00000363306 PDS5BQ9NTI5 1447 aa11□□□□□ -0.65
RNU1-19P-201ENST00000363306 HMGXB3Q12766 1538 aa10.99□□□□□ -0.65
RNU1-19P-201ENST00000363306 LAMC3Q9Y6N6 1575 aa10.99□□□□□ -0.65
RNU1-19P-201ENST00000363306 KIF21AQ7Z4S6 1674 aa10.96□□□□□ -0.65
RNU1-19P-201ENST00000363306 BAZ1AQ9NRL2 1556 aaPredicted RBP10.96□□□□□ -0.65
RNU1-19P-201ENST00000363306 BAZ1BQ9UIG0 1483 aaKnown RBP10.93□□□□□ -0.66
RNU1-19P-201ENST00000363306 TRHP20396 242 aaPredicted RBP10.93□□□□□ -0.66
RNU1-19P-201ENST00000363306 MRC2Q9UBG0 1479 aa10.89□□□□□ -0.67
RNU1-19P-201ENST00000363306 SMARCA4P51532 1647 aa10.88□□□□□ -0.67
RNU1-19P-201ENST00000363306 RIMBP3CA6NJZ7 1639 aa10.87□□□□□ -0.67
RNU1-19P-201ENST00000363306 RIMBP3BA6NNM3 1639 aa10.87□□□□□ -0.67
RNU1-19P-201ENST00000363306 RIMBP3Q9UFD9 1639 aa10.87□□□□□ -0.67
RNU1-19P-201ENST00000363306 WDR62O43379 1518 aa10.85□□□□□ -0.67
RNU1-19P-201ENST00000363306 CADPSQ9ULU8 1353 aa10.83□□□□□ -0.68
RNU1-19P-201ENST00000363306 CYB5RLQ6IPT4 315 aa10.83□□□□□ -0.68
RNU1-19P-201ENST00000363306 ARHGEF11O15085 1522 aa10.78□□□□□ -0.68
RNU1-19P-201ENST00000363306 CEP164Q9UPV0 1460 aa10.75□□□□□ -0.69
RNU1-19P-201ENST00000363306 PEG3Q9GZU2 1588 aa10.75□□□□□ -0.69
RNU1-19P-201ENST00000363306 FANCD2Q9BXW9 1451 aa10.69□□□□□ -0.7
RNU1-19P-201ENST00000363306 MROH2BQ7Z745 1585 aa10.65□□□□□ -0.71
RNU1-19P-201ENST00000363306 ARAP1Q96P48 1450 aa10.63□□□□□ -0.71
RNU1-19P-201ENST00000363306 URB2Q14146 1524 aaKnown RBP10.62□□□□□ -0.71
RNU1-19P-201ENST00000363306 ZNF608Q9ULD9 1512 aaPredicted RBP10.58□□□□□ -0.72
RNU1-19P-201ENST00000363306 FBLN2P98095 1184 aa10.58□□□□□ -0.72
RNU1-19P-201ENST00000363306 ILDR1Q86SU0 546 aaPredicted RBP10.58□□□□□ -0.72
RNU1-19P-201ENST00000363306 IFT140Q96RY7 1462 aa10.56□□□□□ -0.72
RNU1-19P-201ENST00000363306 CFTRP13569 1480 aa10.55□□□□□ -0.72
RNU1-19P-201ENST00000363306 RSF1Q96T23 1441 aaPredicted RBP10.54□□□□□ -0.72
RNU1-19P-201ENST00000363306 WIZO95785 1651 aa10.49□□□□□ -0.73
RNU1-19P-201ENST00000363306 CHD1O14646 1710 aa10.49□□□□□ -0.73
RNU1-19P-201ENST00000363306 EIF4G3O43432 1585 aaKnown RBP10.46□□□□□ -0.74
RNU1-19P-201ENST00000363306 AQRO60306 1485 aaKnown RBP eCLIP10.45□□□□□ -0.74
RNU1-19P-201ENST00000363306 TOPBP1Q92547 1522 aa10.42□□□□□ -0.74
RNU1-19P-201ENST00000363306 CHMP7Q8WUX9 453 aaPredicted RBP10.4□□□□□ -0.74
RNU1-19P-201ENST00000363306 ABCC8Q09428 1581 aa10.39□□□□□ -0.75
RNU1-19P-201ENST00000363306 CLASP1Q7Z460 1538 aa10.36□□□□□ -0.75
RNU1-19P-201ENST00000363306 SYNJ1O43426 1573 aa10.35□□□□□ -0.75
RNU1-19P-201ENST00000363306 PRDM2Q13029 1718 aa10.34□□□□□ -0.75
RNU1-19P-201ENST00000363306 GAPVD1Q14C86 1478 aa10.34□□□□□ -0.75
RNU1-19P-201ENST00000363306 TARBP1Q13395 1621 aaKnown RBP10.33□□□□□ -0.76
RNU1-19P-201ENST00000363306 TDRD9Q8NDG6 1382 aaKnown RBP10.32□□□□□ -0.76
RNU1-19P-201ENST00000363306 DNMBPQ6XZF7 1577 aa10.31□□□□□ -0.76
RNU1-19P-201ENST00000363306 SNAPC4Q5SXM2 1469 aa10.31□□□□□ -0.76
RNU1-19P-201ENST00000363306 KDM4FA0A1W2PPD8 638 aa10.31□□□□□ -0.76
RNU1-19P-201ENST00000363306 TOP2AP11388 1531 aaKnown RBP10.31□□□□□ -0.76
RNU1-19P-201ENST00000363306 SOGA1O94964 1423 aa10.27□□□□□ -0.77
RNU1-19P-201ENST00000363306 POLA1P09884 1462 aaPredicted RBP10.27□□□□□ -0.77
RNU1-19P-201ENST00000363306 RAD54L2Q9Y4B4 1467 aa10.27□□□□□ -0.77
RNU1-19P-201ENST00000363306 MAGI1Q96QZ7 1491 aaPredicted RBP10.25□□□□□ -0.77
RNU1-19P-201ENST00000363306 CCDC88BA6NC98 1476 aa10.23□□□□□ -0.77
RNU1-19P-201ENST00000363306 SYNJ2O15056 1496 aa10.23□□□□□ -0.77
RNU1-19P-201ENST00000363306 FAM69CQ0P6D2 419 aa10.22□□□□□ -0.77
RNU1-19P-201ENST00000363306 GRIN2BQ13224 1484 aa10.21□□□□□ -0.78
RNU1-19P-201ENST00000363306 KIF13AQ9H1H9 1805 aa10.19□□□□□ -0.78
RNU1-19P-201ENST00000363306 WDR97A6NE52 1622 aa10.18□□□□□ -0.78
RNU1-19P-201ENST00000363306 ERCC6L2Q5T890 1561 aa10.17□□□□□ -0.78
RNU1-19P-201ENST00000363306 NPM1P06748 294 aaKnown RBP eCLIP10.16□□□□□ -0.78
RNU1-19P-201ENST00000363306 FBXO41Q8TF61 875 aa10.15□□□□□ -0.78
RNU1-19P-201ENST00000363306 FGD5Q6ZNL6 1462 aa10.14□□□□□ -0.79
RNU1-19P-201ENST00000363306 KDM6BO15054 1643 aa10.14□□□□□ -0.79
RNU1-19P-201ENST00000363306 ABCC10Q5T3U5 1492 aa10.12□□□□□ -0.79
RNU1-19P-201ENST00000363306 CEP170Q5SW79 1584 aa10.11□□□□□ -0.79
RNU1-19P-201ENST00000363306 HECW2Q9P2P5 1572 aa10.09□□□□□ -0.79
RNU1-19P-201ENST00000363306 PBRM1Q86U86 1689 aa10.08□□□□□ -0.8
RNU1-19P-201ENST00000363306 ADGRL1O94910 1474 aa10.07□□□□□ -0.8
RNU1-19P-201ENST00000363306 GRIN2AQ12879 1464 aa10.06□□□□□ -0.8
RNU1-19P-201ENST00000363306 NUP160Q12769 1436 aa10.04□□□□□ -0.8
RNU1-19P-201ENST00000363306 PRG4Q92954 1404 aaPredicted RBP10.04□□□□□ -0.8
RNU1-19P-201ENST00000363306 DIP2BQ9P265 1576 aa10.04□□□□□ -0.8
RNU1-19P-201ENST00000363306 TSPOAP1O95153 1857 aa10.04□□□□□ -0.8
RNU1-19P-201ENST00000363306 JPH4Q96JJ6 628 aa10.03□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 111.9 ms