RNA–Protein interactions for RNA: ENST00000363221.1

RN7SKP163-201, Transcript of RNA, 7SK small nuclear pseudogene 163, humanhuman

BASIC

Gene RN7SKP163, Length 330 nt, Biotype misc RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RN7SKP163-201ENST00000363221 AEBP2Q6ZN18 517 aaPredicted RBP27.27■■□□□ 1.96
RN7SKP163-201ENST00000363221 CHIC1Q5VXU3 224 aa26.4■■□□□ 1.82
RN7SKP163-201ENST00000363221 SENP3Q9H4L4 574 aaPredicted RBP23.39■■□□□ 1.33
RN7SKP163-201ENST00000363221 NISCHQ9Y2I1 1504 aa23.18■■□□□ 1.3
RN7SKP163-201ENST00000363221 PHF23Q9BUL5 403 aaPredicted RBP23.07■■□□□ 1.28
RN7SKP163-201ENST00000363221 FOXD1Q16676 465 aa21.63■■□□□ 1.05
RN7SKP163-201ENST00000363221 PLPPR3Q6T4P5 718 aa21.36■■□□□ 1.01
RN7SKP163-201ENST00000363221 ABCC9O60706 1549 aa21.29■■□□□ 1
RN7SKP163-201ENST00000363221 DNAJC5BQ9UF47 199 aa20.63■□□□□ 0.89
RN7SKP163-201ENST00000363221 CCDC180Q9P1Z9 1646 aa20.56■□□□□ 0.88
RN7SKP163-201ENST00000363221 ADRA2BP18089 450 aa20.49■□□□□ 0.87
RN7SKP163-201ENST00000363221 PPP6R1Q9UPN7 881 aa20.47■□□□□ 0.87
RN7SKP163-201ENST00000363221 PIAS4Q8N2W9 510 aaPredicted RBP20.39■□□□□ 0.85
RN7SKP163-201ENST00000363221 MSH5O43196 834 aa20.23■□□□□ 0.83
RN7SKP163-201ENST00000363221 RB1CC1Q8TDY2 1594 aa20■□□□□ 0.79
RN7SKP163-201ENST00000363221 PABPN1Q86U42 306 aaKnown RBP eCLIP19.71■□□□□ 0.75
RN7SKP163-201ENST00000363221 NACADO15069 1562 aa19.66■□□□□ 0.74
RN7SKP163-201ENST00000363221 DNAJC5Q9H3Z4 198 aa19.66■□□□□ 0.74
RN7SKP163-201ENST00000363221 UNC13AQ9UPW8 1703 aa19.42■□□□□ 0.7
RN7SKP163-201ENST00000363221 DCAF8L2P0C7V8 631 aa19.4■□□□□ 0.7
RN7SKP163-201ENST00000363221 ZCCHC6Q5VYS8 1495 aaKnown RBP19.35■□□□□ 0.69
RN7SKP163-201ENST00000363221 BICRAQ9NZM4 1560 aa19.32■□□□□ 0.68
RN7SKP163-201ENST00000363221 CECR2Q9BXF3 1484 aa19.31■□□□□ 0.68
RN7SKP163-201ENST00000363221 CC2D2AQ9P2K1 1620 aa19.21■□□□□ 0.67
RN7SKP163-201ENST00000363221 MYO15BQ96JP2 1530 aa19.18■□□□□ 0.66
RN7SKP163-201ENST00000363221 DCAF1Q9Y4B6 1507 aa19.16■□□□□ 0.66
RN7SKP163-201ENST00000363221 SHROOM4Q9ULL8 1493 aa19.14■□□□□ 0.65
RN7SKP163-201ENST00000363221 EIF4G1Q04637 1599 aaKnown RBP18.98■□□□□ 0.63
RN7SKP163-201ENST00000363221 SCAF1Q9H7N4 1312 aaKnown RBP18.96■□□□□ 0.63
RN7SKP163-201ENST00000363221 POTEDQ86YR6 584 aa18.93■□□□□ 0.62
RN7SKP163-201ENST00000363221 CUX2O14529 1486 aa18.77■□□□□ 0.6
RN7SKP163-201ENST00000363221 SCRIBQ14160 1630 aa18.77■□□□□ 0.6
RN7SKP163-201ENST00000363221 PPP4R3CPQ6ZMV5 832 aa18.71■□□□□ 0.59
RN7SKP163-201ENST00000363221 MAPK8IP2Q13387 824 aaPredicted RBP18.66■□□□□ 0.58
RN7SKP163-201ENST00000363221 DMRT2Q9Y5R5 561 aa18.55■□□□□ 0.56
RN7SKP163-201ENST00000363221 ERCC6Q03468 1493 aa18.53■□□□□ 0.56
RN7SKP163-201ENST00000363221 TRIM41Q8WV44 630 aa18.45■□□□□ 0.54
RN7SKP163-201ENST00000363221 CNKSR2Q8WXI2 1034 aa18.32■□□□□ 0.52
RN7SKP163-201ENST00000363221 NCBP3Q53F19 620 aaKnown RBP18.26■□□□□ 0.51
RN7SKP163-201ENST00000363221 NCAPD3P42695 1498 aa18.14■□□□□ 0.5
RN7SKP163-201ENST00000363221 RNF216Q9NWF9 866 aaPredicted RBP18.04■□□□□ 0.48
RN7SKP163-201ENST00000363221 NESP48681 1621 aa18.02■□□□□ 0.48
RN7SKP163-201ENST00000363221 HOXD11P31277 338 aaPredicted RBP18.02■□□□□ 0.48
RN7SKP163-201ENST00000363221 THOC2Q8NI27 1593 aaKnown RBP18.02■□□□□ 0.48
RN7SKP163-201ENST00000363221 BAZ1AQ9NRL2 1556 aaPredicted RBP17.96■□□□□ 0.46
RN7SKP163-201ENST00000363221 ATAD2BQ9ULI0 1458 aa17.95■□□□□ 0.46
RN7SKP163-201ENST00000363221 SMARCA4P51532 1647 aa17.94■□□□□ 0.46
RN7SKP163-201ENST00000363221 HMGXB3Q12766 1538 aa17.93■□□□□ 0.46
RN7SKP163-201ENST00000363221 SMARCA2P51531 1590 aa17.91■□□□□ 0.46
RN7SKP163-201ENST00000363221 MROH2BQ7Z745 1585 aa17.87■□□□□ 0.45
RN7SKP163-201ENST00000363221 LAMC3Q9Y6N6 1575 aa17.87■□□□□ 0.45
RN7SKP163-201ENST00000363221 DCAF8L1A6NGE4 600 aa17.85■□□□□ 0.45
RN7SKP163-201ENST00000363221 PDS5BQ9NTI5 1447 aa17.85■□□□□ 0.45
RN7SKP163-201ENST00000363221 NPM3O75607 178 aaKnown RBP17.82■□□□□ 0.44
RN7SKP163-201ENST00000363221 KCNA4P22459 653 aa17.82■□□□□ 0.44
RN7SKP163-201ENST00000363221 OSCARQ8IYS5 282 aa17.81■□□□□ 0.44
RN7SKP163-201ENST00000363221 KIF21AQ7Z4S6 1674 aa17.77■□□□□ 0.44
RN7SKP163-201ENST00000363221 BAZ1BQ9UIG0 1483 aaKnown RBP17.75■□□□□ 0.43
RN7SKP163-201ENST00000363221 PEG3Q9GZU2 1588 aa17.74■□□□□ 0.43
RN7SKP163-201ENST00000363221 RSF1Q96T23 1441 aaPredicted RBP17.73■□□□□ 0.43
RN7SKP163-201ENST00000363221 MRC2Q9UBG0 1479 aa17.68■□□□□ 0.42
RN7SKP163-201ENST00000363221 WIZO95785 1651 aa17.67■□□□□ 0.42
RN7SKP163-201ENST00000363221 WDR62O43379 1518 aa17.64■□□□□ 0.41
RN7SKP163-201ENST00000363221 CADPSQ9ULU8 1353 aa17.56■□□□□ 0.4
RN7SKP163-201ENST00000363221 RIMBP3CA6NJZ7 1639 aa17.56■□□□□ 0.4
RN7SKP163-201ENST00000363221 RIMBP3BA6NNM3 1639 aa17.56■□□□□ 0.4
RN7SKP163-201ENST00000363221 RIMBP3Q9UFD9 1639 aa17.56■□□□□ 0.4
RN7SKP163-201ENST00000363221 TRHP20396 242 aaPredicted RBP17.52■□□□□ 0.4
RN7SKP163-201ENST00000363221 TOP2AP11388 1531 aaKnown RBP17.51■□□□□ 0.39
RN7SKP163-201ENST00000363221 CEP164Q9UPV0 1460 aa17.46■□□□□ 0.39
RN7SKP163-201ENST00000363221 ARHGEF11O15085 1522 aa17.44■□□□□ 0.38
RN7SKP163-201ENST00000363221 SUPT5HO00267 1087 aaKnown RBP17.43■□□□□ 0.38
RN7SKP163-201ENST00000363221 CYB5RLQ6IPT4 315 aa17.41■□□□□ 0.38
RN7SKP163-201ENST00000363221 FANCD2Q9BXW9 1451 aa17.35■□□□□ 0.37
RN7SKP163-201ENST00000363221 CCDC88BA6NC98 1476 aa17.31■□□□□ 0.36
RN7SKP163-201ENST00000363221 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17.26■□□□□ 0.35
RN7SKP163-201ENST00000363221 RNF39Q9H2S5 420 aa17.21■□□□□ 0.35
RN7SKP163-201ENST00000363221 CFTRP13569 1480 aa17.2■□□□□ 0.34
RN7SKP163-201ENST00000363221 URB2Q14146 1524 aaKnown RBP17.2■□□□□ 0.34
RN7SKP163-201ENST00000363221 ARAP1Q96P48 1450 aa17.18■□□□□ 0.34
RN7SKP163-201ENST00000363221 IFT140Q96RY7 1462 aa17.16■□□□□ 0.34
RN7SKP163-201ENST00000363221 ZNF608Q9ULD9 1512 aaPredicted RBP17.11■□□□□ 0.33
RN7SKP163-201ENST00000363221 CACNB1Q02641 598 aaPredicted RBP17.1■□□□□ 0.33
RN7SKP163-201ENST00000363221 C1QBPQ07021 282 aaKnown RBP17.06■□□□□ 0.32
RN7SKP163-201ENST00000363221 FBLN2P98095 1184 aa17.02■□□□□ 0.32
RN7SKP163-201ENST00000363221 CHD1O14646 1710 aa17.01■□□□□ 0.31
RN7SKP163-201ENST00000363221 PRDM2Q13029 1718 aa17.01■□□□□ 0.31
RN7SKP163-201ENST00000363221 EIF4G3O43432 1585 aaKnown RBP16.99■□□□□ 0.31
RN7SKP163-201ENST00000363221 SLC4A1APQ9BWU0 796 aaKnown RBP16.99■□□□□ 0.31
RN7SKP163-201ENST00000363221 ABCC8Q09428 1581 aa16.93■□□□□ 0.3
RN7SKP163-201ENST00000363221 ILDR1Q86SU0 546 aaPredicted RBP16.92■□□□□ 0.3
RN7SKP163-201ENST00000363221 TOPBP1Q92547 1522 aa16.91■□□□□ 0.3
RN7SKP163-201ENST00000363221 AQRO60306 1485 aaKnown RBP eCLIP16.88■□□□□ 0.29
RN7SKP163-201ENST00000363221 SLC4A2P04920 1241 aa16.87■□□□□ 0.29
RN7SKP163-201ENST00000363221 U3KPZ7 1027 aaPredicted RBP16.83■□□□□ 0.28
RN7SKP163-201ENST00000363221 DNMBPQ6XZF7 1577 aa16.81■□□□□ 0.28
RN7SKP163-201ENST00000363221 CLASP1Q7Z460 1538 aa16.81■□□□□ 0.28
RN7SKP163-201ENST00000363221 SYNJ1O43426 1573 aa16.81■□□□□ 0.28
RN7SKP163-201ENST00000363221 TARBP1Q13395 1621 aaKnown RBP16.79■□□□□ 0.28
RN7SKP163-201ENST00000363221 CHMP7Q8WUX9 453 aaPredicted RBP16.78■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms