RNA–Protein interactions for RNA: ENST00000361726.6

GJB1-201, Transcript of gap junction protein beta 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GJB1, Length 1,637 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GJB1-201ENST00000361726 NISCHQ9Y2I1 1504 aa32.21■■■□□ 2.75
GJB1-201ENST00000361726 CCDC180Q9P1Z9 1646 aa28.22■■■□□ 2.11
GJB1-201ENST00000361726 ZCCHC6Q5VYS8 1495 aaKnown RBP27.05■■□□□ 1.92
GJB1-201ENST00000361726 ABCC9O60706 1549 aa26.69■■□□□ 1.86
GJB1-201ENST00000361726 DCAF1Q9Y4B6 1507 aa26.62■■□□□ 1.85
GJB1-201ENST00000361726 DCAF8L2P0C7V8 631 aa26.55■■□□□ 1.84
GJB1-201ENST00000361726 MYO15BQ96JP2 1530 aa26.32■■□□□ 1.8
GJB1-201ENST00000361726 NACADO15069 1562 aa26.23■■□□□ 1.79
GJB1-201ENST00000361726 SHROOM4Q9ULL8 1493 aa26.21■■□□□ 1.79
GJB1-201ENST00000361726 RB1CC1Q8TDY2 1594 aa26.05■■□□□ 1.76
GJB1-201ENST00000361726 SCRIBQ14160 1630 aa25.93■■□□□ 1.74
GJB1-201ENST00000361726 UNC13AQ9UPW8 1703 aa25.66■■□□□ 1.7
GJB1-201ENST00000361726 BICRAQ9NZM4 1560 aa25.29■■□□□ 1.64
GJB1-201ENST00000361726 SUPT5HO00267 1087 aaKnown RBP25.12■■□□□ 1.61
GJB1-201ENST00000361726 PABPN1Q86U42 306 aaKnown RBP eCLIP25.1■■□□□ 1.61
GJB1-201ENST00000361726 CECR2Q9BXF3 1484 aa25.03■■□□□ 1.6
GJB1-201ENST00000361726 RSF1Q96T23 1441 aaPredicted RBP24.92■■□□□ 1.58
GJB1-201ENST00000361726 MROH2BQ7Z745 1585 aa24.9■■□□□ 1.58
GJB1-201ENST00000361726 BAZ1AQ9NRL2 1556 aaPredicted RBP24.89■■□□□ 1.57
GJB1-201ENST00000361726 SMARCA4P51532 1647 aa24.83■■□□□ 1.57
GJB1-201ENST00000361726 WIZO95785 1651 aa24.74■■□□□ 1.55
GJB1-201ENST00000361726 EIF4G1Q04637 1599 aaKnown RBP24.52■■□□□ 1.52
GJB1-201ENST00000361726 PEG3Q9GZU2 1588 aa24.5■■□□□ 1.51
GJB1-201ENST00000361726 TOP2AP11388 1531 aaKnown RBP24.45■■□□□ 1.5
GJB1-201ENST00000361726 SMARCA2P51531 1590 aa24.39■■□□□ 1.5
GJB1-201ENST00000361726 ATAD2BQ9ULI0 1458 aa24.38■■□□□ 1.49
GJB1-201ENST00000361726 BAZ1BQ9UIG0 1483 aaKnown RBP24.26■■□□□ 1.47
GJB1-201ENST00000361726 CC2D2AQ9P2K1 1620 aa24.19■■□□□ 1.46
GJB1-201ENST00000361726 HMGXB3Q12766 1538 aa24.18■■□□□ 1.46
GJB1-201ENST00000361726 NCAPD3P42695 1498 aa24.16■■□□□ 1.46
GJB1-201ENST00000361726 CCDC88BA6NC98 1476 aa24.15■■□□□ 1.46
GJB1-201ENST00000361726 CHIC1Q5VXU3 224 aa23.99■■□□□ 1.43
GJB1-201ENST00000361726 ABCC8Q09428 1581 aa23.68■■□□□ 1.38
GJB1-201ENST00000361726 PRDM2Q13029 1718 aa23.68■■□□□ 1.38
GJB1-201ENST00000361726 DNAJC5BQ9UF47 199 aa23.64■■□□□ 1.38
GJB1-201ENST00000361726 CFTRP13569 1480 aa23.62■■□□□ 1.37
GJB1-201ENST00000361726 TRIM41Q8WV44 630 aa23.6■■□□□ 1.37
GJB1-201ENST00000361726 CADPSQ9ULU8 1353 aa23.52■■□□□ 1.36
GJB1-201ENST00000361726 WRNQ14191 1432 aaPredicted RBP eCLIP23.47■■□□□ 1.35
GJB1-201ENST00000361726 SYNJ1O43426 1573 aa23.45■■□□□ 1.34
GJB1-201ENST00000361726 LAMC3Q9Y6N6 1575 aa23.42■■□□□ 1.34
GJB1-201ENST00000361726 NESP48681 1621 aa23.42■■□□□ 1.34
GJB1-201ENST00000361726 BIVM-ERCC5R4GMW8 1640 aa23.36■■□□□ 1.33
GJB1-201ENST00000361726 TOP2BQ02880 1626 aa23.34■■□□□ 1.33
GJB1-201ENST00000361726 FANCD2Q9BXW9 1451 aa23.31■■□□□ 1.32
GJB1-201ENST00000361726 CUX1P39880 1505 aa23.3■■□□□ 1.32
GJB1-201ENST00000361726 KIF21AQ7Z4S6 1674 aa23.24■■□□□ 1.31
GJB1-201ENST00000361726 FAM9AQ8IZU1 332 aaPredicted RBP23.19■■□□□ 1.3
GJB1-201ENST00000361726 CEP164Q9UPV0 1460 aa23.19■■□□□ 1.3
GJB1-201ENST00000361726 PDS5BQ9NTI5 1447 aa23.17■■□□□ 1.3
GJB1-201ENST00000361726 SOGA1O94964 1423 aa23.15■■□□□ 1.3
GJB1-201ENST00000361726 DNMBPQ6XZF7 1577 aa23.13■■□□□ 1.29
GJB1-201ENST00000361726 RUSC2Q8N2Y8 1516 aa23.09■■□□□ 1.29
GJB1-201ENST00000361726 LOC105371045A0A1W2PR82 267 aa23.07■■□□□ 1.28
GJB1-201ENST00000361726 TOPBP1Q92547 1522 aa23.06■■□□□ 1.28
GJB1-201ENST00000361726 EEA1Q15075 1411 aa23.06■■□□□ 1.28
GJB1-201ENST00000361726 URB2Q14146 1524 aaKnown RBP23.05■■□□□ 1.28
GJB1-201ENST00000361726 FGD5Q6ZNL6 1462 aa23.05■■□□□ 1.28
GJB1-201ENST00000361726 POLA1P09884 1462 aaPredicted RBP22.94■■□□□ 1.26
GJB1-201ENST00000361726 MRC2Q9UBG0 1479 aa22.93■■□□□ 1.26
GJB1-201ENST00000361726 CSRNP3Q8WYN3 585 aa22.9■■□□□ 1.26
GJB1-201ENST00000361726 EHMT2Q96KQ7 1210 aa22.9■■□□□ 1.26
GJB1-201ENST00000361726 ERCC6Q03468 1493 aa22.88■■□□□ 1.25
GJB1-201ENST00000361726 KIF27Q86VH2 1401 aa22.87■■□□□ 1.25
GJB1-201ENST00000361726 WDR97A6NE52 1622 aa22.87■■□□□ 1.25
GJB1-201ENST00000361726 KIF21BO75037 1637 aa22.86■■□□□ 1.25
GJB1-201ENST00000361726 CUX2O14529 1486 aa22.86■■□□□ 1.25
GJB1-201ENST00000361726 RAD54L2Q9Y4B4 1467 aa22.86■■□□□ 1.25
GJB1-201ENST00000361726 WDR62O43379 1518 aa22.84■■□□□ 1.25
GJB1-201ENST00000361726 THOC2Q8NI27 1593 aaKnown RBP22.83■■□□□ 1.25
GJB1-201ENST00000361726 ABCA10Q8WWZ4 1543 aa22.82■■□□□ 1.24
GJB1-201ENST00000361726 GOLGA3Q08378 1498 aa22.78■■□□□ 1.24
GJB1-201ENST00000361726 TARBP1Q13395 1621 aaKnown RBP22.77■■□□□ 1.23
GJB1-201ENST00000361726 ABCA5Q8WWZ7 1642 aa22.71■■□□□ 1.23
GJB1-201ENST00000361726 PRXQ9BXM0 1461 aa22.7■■□□□ 1.22
GJB1-201ENST00000361726 RAPGEF2Q9Y4G8 1499 aa22.7■■□□□ 1.22
GJB1-201ENST00000361726 ERICH3Q5RHP9 1530 aa22.69■■□□□ 1.22
GJB1-201ENST00000361726 IGF1RP08069 1367 aa22.65■■□□□ 1.22
GJB1-201ENST00000361726 TNIKQ9UKE5 1360 aa22.64■■□□□ 1.22
GJB1-201ENST00000361726 UBTFP17480 764 aaKnown RBP22.62■■□□□ 1.21
GJB1-201ENST00000361726 IFT140Q96RY7 1462 aa22.61■■□□□ 1.21
GJB1-201ENST00000361726 PBRM1Q86U86 1689 aa22.61■■□□□ 1.21
GJB1-201ENST00000361726 CUL7Q14999 1698 aa22.61■■□□□ 1.21
GJB1-201ENST00000361726 TDRD9Q8NDG6 1382 aaKnown RBP22.61■■□□□ 1.21
GJB1-201ENST00000361726 GAPVD1Q14C86 1478 aa22.59■■□□□ 1.21
GJB1-201ENST00000361726 CEP162Q5TB80 1403 aa22.56■■□□□ 1.2
GJB1-201ENST00000361726 CARMIL1Q5VZK9 1371 aa22.55■■□□□ 1.2
GJB1-201ENST00000361726 ZNF608Q9ULD9 1512 aaPredicted RBP22.51■■□□□ 1.19
GJB1-201ENST00000361726 EIF4G3O43432 1585 aaKnown RBP22.5■■□□□ 1.19
GJB1-201ENST00000361726 AQRO60306 1485 aaKnown RBP eCLIP22.5■■□□□ 1.19
GJB1-201ENST00000361726 GRIN2BQ13224 1484 aa22.43■■□□□ 1.18
GJB1-201ENST00000361726 ADAMTS12P58397 1594 aa22.42■■□□□ 1.18
GJB1-201ENST00000361726 CTTNBP2Q8WZ74 1663 aa22.41■■□□□ 1.18
GJB1-201ENST00000361726 CLIP1P30622 1438 aa22.39■■□□□ 1.18
GJB1-201ENST00000361726 FHAD1B1AJZ9 1412 aa22.33■■□□□ 1.17
GJB1-201ENST00000361726 SNAPC4Q5SXM2 1469 aa22.33■■□□□ 1.16
GJB1-201ENST00000361726 RANGAP1P46060 587 aaPredicted RBP22.31■■□□□ 1.16
GJB1-201ENST00000361726 MAGI1Q96QZ7 1491 aaPredicted RBP22.26■■□□□ 1.15
GJB1-201ENST00000361726 ARAP1Q96P48 1450 aa22.23■■□□□ 1.15
GJB1-201ENST00000361726 ARHGAP35Q9NRY4 1499 aa22.22■■□□□ 1.15
Retrieved 100 of 20,778 RNA–protein pairs in 6.6 ms