RNA–Protein interactions for RNA: ENST00000360831.9

NLE1-201, Transcript of notchless homolog 1, humanhuman

TSL 5 BASIC

Gene NLE1, Length 1,726 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NLE1-201ENST00000360831 NISCHQ9Y2I1 1504 aa40.46■■■■■ 4.07
NLE1-201ENST00000360831 CCDC180Q9P1Z9 1646 aa35.76■■■■□ 3.32
NLE1-201ENST00000360831 ABCC9O60706 1549 aa34.73■■■■□ 3.15
NLE1-201ENST00000360831 ZCCHC6Q5VYS8 1495 aaKnown RBP33.77■■■■□ 3
NLE1-201ENST00000360831 DCAF8L2P0C7V8 631 aa33.77■■■■□ 3
NLE1-201ENST00000360831 NACADO15069 1562 aa33.57■■■□□ 2.97
NLE1-201ENST00000360831 RB1CC1Q8TDY2 1594 aa33.53■■■□□ 2.96
NLE1-201ENST00000360831 MYO15BQ96JP2 1530 aa33.48■■■□□ 2.95
NLE1-201ENST00000360831 DCAF1Q9Y4B6 1507 aa33.47■■■□□ 2.95
NLE1-201ENST00000360831 UNC13AQ9UPW8 1703 aa32.74■■■□□ 2.83
NLE1-201ENST00000360831 SCRIBQ14160 1630 aa32.71■■■□□ 2.83
NLE1-201ENST00000360831 PABPN1Q86U42 306 aaKnown RBP eCLIP32.56■■■□□ 2.8
NLE1-201ENST00000360831 BICRAQ9NZM4 1560 aa32.49■■■□□ 2.79
NLE1-201ENST00000360831 SHROOM4Q9ULL8 1493 aa32.25■■■□□ 2.75
NLE1-201ENST00000360831 EIF4G1Q04637 1599 aaKnown RBP31.62■■■□□ 2.65
NLE1-201ENST00000360831 DNAJC5BQ9UF47 199 aa31.57■■■□□ 2.64
NLE1-201ENST00000360831 CECR2Q9BXF3 1484 aa31.5■■■□□ 2.63
NLE1-201ENST00000360831 SUPT5HO00267 1087 aaKnown RBP31.41■■■□□ 2.62
NLE1-201ENST00000360831 CC2D2AQ9P2K1 1620 aa31.4■■■□□ 2.62
NLE1-201ENST00000360831 BAZ1AQ9NRL2 1556 aaPredicted RBP31.34■■■□□ 2.61
NLE1-201ENST00000360831 SMARCA4P51532 1647 aa31.31■■■□□ 2.6
NLE1-201ENST00000360831 MROH2BQ7Z745 1585 aa31.2■■■□□ 2.59
NLE1-201ENST00000360831 ATAD2BQ9ULI0 1458 aa31.07■■■□□ 2.56
NLE1-201ENST00000360831 SMARCA2P51531 1590 aa31.04■■■□□ 2.56
NLE1-201ENST00000360831 NCAPD3P42695 1498 aa30.99■■■□□ 2.55
NLE1-201ENST00000360831 RSF1Q96T23 1441 aaPredicted RBP30.99■■■□□ 2.55
NLE1-201ENST00000360831 PEG3Q9GZU2 1588 aa30.98■■■□□ 2.55
NLE1-201ENST00000360831 WIZO95785 1651 aa30.88■■■□□ 2.53
NLE1-201ENST00000360831 HMGXB3Q12766 1538 aa30.85■■■□□ 2.53
NLE1-201ENST00000360831 BAZ1BQ9UIG0 1483 aaKnown RBP30.84■■■□□ 2.53
NLE1-201ENST00000360831 CHIC1Q5VXU3 224 aa30.64■■■□□ 2.5
NLE1-201ENST00000360831 TOP2AP11388 1531 aaKnown RBP30.56■■■□□ 2.48
NLE1-201ENST00000360831 CCDC88BA6NC98 1476 aa30.23■■■□□ 2.43
NLE1-201ENST00000360831 NESP48681 1621 aa30.16■■■□□ 2.42
NLE1-201ENST00000360831 CADPSQ9ULU8 1353 aa30.14■■■□□ 2.41
NLE1-201ENST00000360831 LAMC3Q9Y6N6 1575 aa30.1■■■□□ 2.41
NLE1-201ENST00000360831 CFTRP13569 1480 aa30.02■■■□□ 2.4
NLE1-201ENST00000360831 PDS5BQ9NTI5 1447 aa29.93■■■□□ 2.38
NLE1-201ENST00000360831 ERCC6Q03468 1493 aa29.91■■■□□ 2.38
NLE1-201ENST00000360831 FANCD2Q9BXW9 1451 aa29.78■■■□□ 2.36
NLE1-201ENST00000360831 KIF21AQ7Z4S6 1674 aa29.77■■■□□ 2.36
NLE1-201ENST00000360831 PRDM2Q13029 1718 aa29.75■■■□□ 2.35
NLE1-201ENST00000360831 CEP164Q9UPV0 1460 aa29.7■■■□□ 2.35
NLE1-201ENST00000360831 THOC2Q8NI27 1593 aaKnown RBP29.58■■■□□ 2.33
NLE1-201ENST00000360831 MRC2Q9UBG0 1479 aa29.58■■■□□ 2.33
NLE1-201ENST00000360831 LOC105371045A0A1W2PR82 267 aa29.53■■■□□ 2.32
NLE1-201ENST00000360831 WDR62O43379 1518 aa29.45■■■□□ 2.31
NLE1-201ENST00000360831 URB2Q14146 1524 aaKnown RBP29.45■■■□□ 2.3
NLE1-201ENST00000360831 TRIM41Q8WV44 630 aa29.43■■■□□ 2.3
NLE1-201ENST00000360831 CUX2O14529 1486 aa29.43■■■□□ 2.3
NLE1-201ENST00000360831 ABCC8Q09428 1581 aa29.35■■■□□ 2.29
NLE1-201ENST00000360831 TOPBP1Q92547 1522 aa29.33■■■□□ 2.29
NLE1-201ENST00000360831 DNMBPQ6XZF7 1577 aa29.31■■■□□ 2.28
NLE1-201ENST00000360831 CUX1P39880 1505 aa29.25■■■□□ 2.27
NLE1-201ENST00000360831 HRCP23327 699 aa29.24■■■□□ 2.27
NLE1-201ENST00000360831 WRNQ14191 1432 aaPredicted RBP eCLIP29.22■■■□□ 2.27
NLE1-201ENST00000360831 PCGF6Q9BYE7 350 aa29.21■■■□□ 2.27
NLE1-201ENST00000360831 POLA1P09884 1462 aaPredicted RBP29.12■■■□□ 2.25
NLE1-201ENST00000360831 SYNJ1O43426 1573 aa29.1■■■□□ 2.25
NLE1-201ENST00000360831 FGD5Q6ZNL6 1462 aa29.1■■■□□ 2.25
NLE1-201ENST00000360831 TOP2BQ02880 1626 aa29.08■■■□□ 2.25
NLE1-201ENST00000360831 IFT140Q96RY7 1462 aa29.06■■■□□ 2.24
NLE1-201ENST00000360831 BIVM-ERCC5R4GMW8 1640 aa29.05■■■□□ 2.24
NLE1-201ENST00000360831 SOGA1O94964 1423 aa29.03■■■□□ 2.24
NLE1-201ENST00000360831 RAD54L2Q9Y4B4 1467 aa29■■■□□ 2.23
NLE1-201ENST00000360831 FAM9AQ8IZU1 332 aaPredicted RBP28.97■■■□□ 2.23
NLE1-201ENST00000360831 TARBP1Q13395 1621 aaKnown RBP28.96■■■□□ 2.23
NLE1-201ENST00000360831 TRIM26Q12899 539 aaPredicted RBP28.94■■■□□ 2.22
NLE1-201ENST00000360831 ZNF608Q9ULD9 1512 aaPredicted RBP28.91■■■□□ 2.22
NLE1-201ENST00000360831 TDRD9Q8NDG6 1382 aaKnown RBP28.83■■■□□ 2.21
NLE1-201ENST00000360831 ABCA10Q8WWZ4 1543 aa28.82■■■□□ 2.2
NLE1-201ENST00000360831 AQRO60306 1485 aaKnown RBP eCLIP28.81■■■□□ 2.22e-6■■■■■ 33.8
NLE1-201ENST00000360831 WDR97A6NE52 1622 aa28.78■■■□□ 2.2
NLE1-201ENST00000360831 EIF4G3O43432 1585 aaKnown RBP28.78■■■□□ 2.2
NLE1-201ENST00000360831 GAPVD1Q14C86 1478 aa28.68■■■□□ 2.18
NLE1-201ENST00000360831 ABCA5Q8WWZ7 1642 aa28.65■■■□□ 2.18
NLE1-201ENST00000360831 GRIN2BQ13224 1484 aa28.62■■■□□ 2.17
NLE1-201ENST00000360831 KIF27Q86VH2 1401 aa28.58■■■□□ 2.17
NLE1-201ENST00000360831 PBRM1Q86U86 1689 aa28.55■■■□□ 2.16
NLE1-201ENST00000360831 SNAPC4Q5SXM2 1469 aa28.53■■■□□ 2.16
NLE1-201ENST00000360831 EHMT2Q96KQ7 1210 aa28.52■■■□□ 2.16
NLE1-201ENST00000360831 EEA1Q15075 1411 aa28.5■■■□□ 2.15
NLE1-201ENST00000360831 MAGI1Q96QZ7 1491 aaPredicted RBP28.5■■■□□ 2.15
NLE1-201ENST00000360831 ERICH3Q5RHP9 1530 aa28.48■■■□□ 2.15
NLE1-201ENST00000360831 FBLN2P98095 1184 aa28.44■■■□□ 2.14
NLE1-201ENST00000360831 RUSC2Q8N2Y8 1516 aa28.43■■■□□ 2.14
NLE1-201ENST00000360831 IGF1RP08069 1367 aa28.42■■■□□ 2.14
NLE1-201ENST00000360831 PPARGC1BQ86YN6 1023 aaKnown RBP28.41■■■□□ 2.14
NLE1-201ENST00000360831 CHMP7Q8WUX9 453 aaPredicted RBP28.4■■■□□ 2.14
NLE1-201ENST00000360831 SYNJ2O15056 1496 aa28.39■■■□□ 2.14
NLE1-201ENST00000360831 ADAMTS12P58397 1594 aa28.36■■■□□ 2.13
NLE1-201ENST00000360831 FHAD1B1AJZ9 1412 aa28.36■■■□□ 2.13
NLE1-201ENST00000360831 OSCARQ8IYS5 282 aa28.35■■■□□ 2.13
NLE1-201ENST00000360831 CHD1O14646 1710 aa28.34■■■□□ 2.13
NLE1-201ENST00000360831 ZEB1P37275 1124 aaPredicted RBP28.32■■■□□ 2.12
NLE1-201ENST00000360831 TNIKQ9UKE5 1360 aa28.32■■■□□ 2.12
NLE1-201ENST00000360831 CSRNP3Q8WYN3 585 aa28.32■■■□□ 2.12
NLE1-201ENST00000360831 CUL7Q14999 1698 aa28.28■■■□□ 2.12
NLE1-201ENST00000360831 CARMIL1Q5VZK9 1371 aa28.27■■■□□ 2.12
NLE1-201ENST00000360831 GRIN2AQ12879 1464 aa28.25■■■□□ 2.11
Retrieved 100 of 20,778 RNA–protein pairs in 323.9 ms