RNA–Protein interactions for RNA: ENST00000358791.9

BCAS4-201, Transcript of breast carcinoma amplified sequence 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene BCAS4, Length 1,378 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BCAS4-201ENST00000358791 NISCHQ9Y2I1 1504 aa35.82■■■■□ 3.32
BCAS4-201ENST00000358791 CCDC180Q9P1Z9 1646 aa32.14■■■□□ 2.73
BCAS4-201ENST00000358791 ABCC9O60706 1549 aa32.12■■■□□ 2.73
BCAS4-201ENST00000358791 RB1CC1Q8TDY2 1594 aa30.57■■■□□ 2.48
BCAS4-201ENST00000358791 NACADO15069 1562 aa30.37■■■□□ 2.45
BCAS4-201ENST00000358791 DCAF8L2P0C7V8 631 aa30.21■■■□□ 2.43
BCAS4-201ENST00000358791 DNAJC5BQ9UF47 199 aa30.1■■■□□ 2.41
BCAS4-201ENST00000358791 AEBP2Q6ZN18 517 aaPredicted RBP29.99■■■□□ 2.39
BCAS4-201ENST00000358791 MYO15BQ96JP2 1530 aa29.96■■■□□ 2.39
BCAS4-201ENST00000358791 PABPN1Q86U42 306 aaKnown RBP eCLIP29.9■■■□□ 2.38
BCAS4-201ENST00000358791 UNC13AQ9UPW8 1703 aa29.9■■■□□ 2.38
BCAS4-201ENST00000358791 ZCCHC6Q5VYS8 1495 aaKnown RBP29.71■■■□□ 2.35
BCAS4-201ENST00000358791 BICRAQ9NZM4 1560 aa29.7■■■□□ 2.34
BCAS4-201ENST00000358791 DCAF1Q9Y4B6 1507 aa29.58■■■□□ 2.33
BCAS4-201ENST00000358791 CHIC1Q5VXU3 224 aa29.45■■■□□ 2.31
BCAS4-201ENST00000358791 SCRIBQ14160 1630 aa29.31■■■□□ 2.28
BCAS4-201ENST00000358791 SHROOM4Q9ULL8 1493 aa29.28■■■□□ 2.28
BCAS4-201ENST00000358791 CC2D2AQ9P2K1 1620 aa29.01■■■□□ 2.24
BCAS4-201ENST00000358791 EIF4G1Q04637 1599 aaKnown RBP28.96■■■□□ 2.23
BCAS4-201ENST00000358791 CECR2Q9BXF3 1484 aa28.93■■■□□ 2.22
BCAS4-201ENST00000358791 NCAPD3P42695 1498 aa28.03■■■□□ 2.08
BCAS4-201ENST00000358791 ATAD2BQ9ULI0 1458 aa27.97■■■□□ 2.07
BCAS4-201ENST00000358791 SMARCA4P51532 1647 aa27.95■■■□□ 2.06
BCAS4-201ENST00000358791 SMARCA2P51531 1590 aa27.88■■■□□ 2.05
BCAS4-201ENST00000358791 HMGXB3Q12766 1538 aa27.84■■■□□ 2.05
BCAS4-201ENST00000358791 BAZ1AQ9NRL2 1556 aaPredicted RBP27.8■■■□□ 2.04
BCAS4-201ENST00000358791 ERCC6Q03468 1493 aa27.73■■■□□ 2.03
BCAS4-201ENST00000358791 BAZ1BQ9UIG0 1483 aaKnown RBP27.69■■■□□ 2.02
BCAS4-201ENST00000358791 PEG3Q9GZU2 1588 aa27.67■■■□□ 2.02
BCAS4-201ENST00000358791 CUX2O14529 1486 aa27.66■■■□□ 2.02
BCAS4-201ENST00000358791 NESP48681 1621 aa27.61■■■□□ 2.01
BCAS4-201ENST00000358791 MROH2BQ7Z745 1585 aa27.61■■■□□ 2.01
BCAS4-201ENST00000358791 DNAJC5Q9H3Z4 198 aa27.6■■■□□ 2.01
BCAS4-201ENST00000358791 LAMC3Q9Y6N6 1575 aa27.4■■□□□ 1.98
BCAS4-201ENST00000358791 THOC2Q8NI27 1593 aaKnown RBP27.32■■□□□ 1.96
BCAS4-201ENST00000358791 WIZO95785 1651 aa27.28■■□□□ 1.96
BCAS4-201ENST00000358791 KIF21AQ7Z4S6 1674 aa27.25■■□□□ 1.95
BCAS4-201ENST00000358791 PDS5BQ9NTI5 1447 aa27.24■■□□□ 1.95
BCAS4-201ENST00000358791 CADPSQ9ULU8 1353 aa27.18■■□□□ 1.94
BCAS4-201ENST00000358791 RSF1Q96T23 1441 aaPredicted RBP27.04■■□□□ 1.92
BCAS4-201ENST00000358791 MRC2Q9UBG0 1479 aa27.01■■□□□ 1.91
BCAS4-201ENST00000358791 WDR62O43379 1518 aa26.95■■□□□ 1.9
BCAS4-201ENST00000358791 TOP2AP11388 1531 aaKnown RBP26.94■■□□□ 1.9
BCAS4-201ENST00000358791 CEP164Q9UPV0 1460 aa26.91■■□□□ 1.9
BCAS4-201ENST00000358791 CFTRP13569 1480 aa26.88■■□□□ 1.89
BCAS4-201ENST00000358791 FANCD2Q9BXW9 1451 aa26.88■■□□□ 1.89
BCAS4-201ENST00000358791 URB2Q14146 1524 aaKnown RBP26.67■■□□□ 1.86
BCAS4-201ENST00000358791 CCDC88BA6NC98 1476 aa26.63■■□□□ 1.85
BCAS4-201ENST00000358791 PRDM2Q13029 1718 aa26.63■■□□□ 1.85
BCAS4-201ENST00000358791 TRIM41Q8WV44 630 aa26.42■■□□□ 1.82
BCAS4-201ENST00000358791 OSCARQ8IYS5 282 aa26.39■■□□□ 1.82
BCAS4-201ENST00000358791 TOPBP1Q92547 1522 aa26.38■■□□□ 1.81
BCAS4-201ENST00000358791 IFT140Q96RY7 1462 aa26.37■■□□□ 1.81
BCAS4-201ENST00000358791 ZNF608Q9ULD9 1512 aaPredicted RBP26.34■■□□□ 1.81
BCAS4-201ENST00000358791 ABCC8Q09428 1581 aa26.3■■□□□ 1.8
BCAS4-201ENST00000358791 DNMBPQ6XZF7 1577 aa26.28■■□□□ 1.8
BCAS4-201ENST00000358791 EIF4G3O43432 1585 aaKnown RBP26.2■■□□□ 1.78
BCAS4-201ENST00000358791 TARBP1Q13395 1621 aaKnown RBP26.15■■□□□ 1.78
BCAS4-201ENST00000358791 POLA1P09884 1462 aaPredicted RBP26.12■■□□□ 1.77
BCAS4-201ENST00000358791 AQRO60306 1485 aaKnown RBP eCLIP26.09■■□□□ 1.77
BCAS4-201ENST00000358791 RIMBP3CA6NJZ7 1639 aa26.08■■□□□ 1.76
BCAS4-201ENST00000358791 RIMBP3BA6NNM3 1639 aa26.08■■□□□ 1.76
BCAS4-201ENST00000358791 RIMBP3Q9UFD9 1639 aa26.08■■□□□ 1.76
BCAS4-201ENST00000358791 RAD54L2Q9Y4B4 1467 aa26.03■■□□□ 1.76
BCAS4-201ENST00000358791 CHD1O14646 1710 aa26■■□□□ 1.75
BCAS4-201ENST00000358791 ARHGEF11O15085 1522 aa25.99■■□□□ 1.75
BCAS4-201ENST00000358791 SOGA1O94964 1423 aa25.99■■□□□ 1.75
BCAS4-201ENST00000358791 FGD5Q6ZNL6 1462 aa25.96■■□□□ 1.75
BCAS4-201ENST00000358791 TDRD9Q8NDG6 1382 aaKnown RBP25.94■■□□□ 1.74
BCAS4-201ENST00000358791 CUX1P39880 1505 aa25.94■■□□□ 1.74
BCAS4-201ENST00000358791 FBLN2P98095 1184 aa25.91■■□□□ 1.74
BCAS4-201ENST00000358791 WDR97A6NE52 1622 aa25.87■■□□□ 1.73
BCAS4-201ENST00000358791 SUPT5HO00267 1087 aaKnown RBP25.86■■□□□ 1.73
BCAS4-201ENST00000358791 SNAPC4Q5SXM2 1469 aa25.83■■□□□ 1.73
BCAS4-201ENST00000358791 PHF23Q9BUL5 403 aaPredicted RBP25.82■■□□□ 1.72
BCAS4-201ENST00000358791 CYB5RLQ6IPT4 315 aa25.79■■□□□ 1.72
BCAS4-201ENST00000358791 GRIN2BQ13224 1484 aa25.76■■□□□ 1.71
BCAS4-201ENST00000358791 MAGI1Q96QZ7 1491 aaPredicted RBP25.76■■□□□ 1.71
BCAS4-201ENST00000358791 ARAP1Q96P48 1450 aa25.74■■□□□ 1.71
BCAS4-201ENST00000358791 CHMP7Q8WUX9 453 aaPredicted RBP25.71■■□□□ 1.71
BCAS4-201ENST00000358791 CLASP1Q7Z460 1538 aa25.7■■□□□ 1.7
BCAS4-201ENST00000358791 SYNJ1O43426 1573 aa25.68■■□□□ 1.7
BCAS4-201ENST00000358791 PBRM1Q86U86 1689 aa25.68■■□□□ 1.7
BCAS4-201ENST00000358791 SYNJ2O15056 1496 aa25.67■■□□□ 1.7
BCAS4-201ENST00000358791 GAPVD1Q14C86 1478 aa25.67■■□□□ 1.7
BCAS4-201ENST00000358791 ABCA10Q8WWZ4 1543 aa25.66■■□□□ 1.7
BCAS4-201ENST00000358791 ABCA5Q8WWZ7 1642 aa25.63■■□□□ 1.69
BCAS4-201ENST00000358791 SENP3Q9H4L4 574 aaPredicted RBP25.62■■□□□ 1.69
BCAS4-201ENST00000358791 WRNQ14191 1432 aaPredicted RBP eCLIP25.55■■□□□ 1.68
BCAS4-201ENST00000358791 BIVM-ERCC5R4GMW8 1640 aa25.53■■□□□ 1.68
BCAS4-201ENST00000358791 TOP2BQ02880 1626 aa25.52■■□□□ 1.68
BCAS4-201ENST00000358791 TRHP20396 242 aaPredicted RBP25.48■■□□□ 1.67
BCAS4-201ENST00000358791 GRIN2AQ12879 1464 aa25.44■■□□□ 1.66
BCAS4-201ENST00000358791 ADAMTS12P58397 1594 aa25.44■■□□□ 1.66
BCAS4-201ENST00000358791 CEP170Q5SW79 1584 aa25.36■■□□□ 1.65
BCAS4-201ENST00000358791 FHAD1B1AJZ9 1412 aa25.35■■□□□ 1.65
BCAS4-201ENST00000358791 NUP160Q12769 1436 aa25.35■■□□□ 1.65
BCAS4-201ENST00000358791 ERICH3Q5RHP9 1530 aa25.34■■□□□ 1.65
BCAS4-201ENST00000358791 ERCC6L2Q5T890 1561 aa25.31■■□□□ 1.64
BCAS4-201ENST00000358791 SHROOM2Q13796 1616 aa25.24■■□□□ 1.63
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms