RNA–Protein interactions for RNA: ENST00000358758.11

PRRT2-202, Transcript of proline rich transmembrane protein 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRRT2, Length 2,567 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRRT2-202ENST00000358758 NISCHQ9Y2I1 1504 aa32.75■■■□□ 2.83
PRRT2-202ENST00000358758 CCDC180Q9P1Z9 1646 aa28.86■■■□□ 2.21
PRRT2-202ENST00000358758 ABCC9O60706 1549 aa28.53■■■□□ 2.16
PRRT2-202ENST00000358758 DCAF8L2P0C7V8 631 aa27.7■■■□□ 2.03
PRRT2-202ENST00000358758 ZCCHC6Q5VYS8 1495 aaKnown RBP27.28■■□□□ 1.96
PRRT2-202ENST00000358758 RB1CC1Q8TDY2 1594 aa27.2■■□□□ 1.95
PRRT2-202ENST00000358758 NACADO15069 1562 aa27.16■■□□□ 1.94
PRRT2-202ENST00000358758 MYO15BQ96JP2 1530 aa26.92■■□□□ 1.9
PRRT2-202ENST00000358758 DCAF1Q9Y4B6 1507 aa26.9■■□□□ 1.9
PRRT2-202ENST00000358758 PABPN1Q86U42 306 aaKnown RBP eCLIP26.81■■□□□ 1.88
PRRT2-202ENST00000358758 UNC13AQ9UPW8 1703 aa26.71■■□□□ 1.87
PRRT2-202ENST00000358758 SCRIBQ14160 1630 aa26.66■■□□□ 1.86
PRRT2-202ENST00000358758 BICRAQ9NZM4 1560 aa26.52■■□□□ 1.84
PRRT2-202ENST00000358758 SHROOM4Q9ULL8 1493 aa26.33■■□□□ 1.81
PRRT2-202ENST00000358758 DNAJC5BQ9UF47 199 aa26.24■■□□□ 1.79
PRRT2-202ENST00000358758 EIF4G1Q04637 1599 aaKnown RBP25.79■■□□□ 1.72
PRRT2-202ENST00000358758 CECR2Q9BXF3 1484 aa25.69■■□□□ 1.7
PRRT2-202ENST00000358758 CC2D2AQ9P2K1 1620 aa25.68■■□□□ 1.7
PRRT2-202ENST00000358758 SMARCA4P51532 1647 aa25.38■■□□□ 1.65
PRRT2-202ENST00000358758 MROH2BQ7Z745 1585 aa25.36■■□□□ 1.65
PRRT2-202ENST00000358758 BAZ1AQ9NRL2 1556 aaPredicted RBP25.31■■□□□ 1.64
PRRT2-202ENST00000358758 ATAD2BQ9ULI0 1458 aa25.26■■□□□ 1.63
PRRT2-202ENST00000358758 NCAPD3P42695 1498 aa25.14■■□□□ 1.62
PRRT2-202ENST00000358758 WIZO95785 1651 aa25.1■■□□□ 1.61
PRRT2-202ENST00000358758 SMARCA2P51531 1590 aa25.1■■□□□ 1.61
PRRT2-202ENST00000358758 RSF1Q96T23 1441 aaPredicted RBP25.09■■□□□ 1.61
PRRT2-202ENST00000358758 BAZ1BQ9UIG0 1483 aaKnown RBP25.04■■□□□ 1.6
PRRT2-202ENST00000358758 PEG3Q9GZU2 1588 aa25.01■■□□□ 1.59
PRRT2-202ENST00000358758 HMGXB3Q12766 1538 aa24.96■■□□□ 1.59
PRRT2-202ENST00000358758 SUPT5HO00267 1087 aaKnown RBP24.8■■□□□ 1.56
PRRT2-202ENST00000358758 NESP48681 1621 aa24.76■■□□□ 1.55
PRRT2-202ENST00000358758 HRCP23327 699 aa24.72■■□□□ 1.55
PRRT2-202ENST00000358758 TOP2AP11388 1531 aaKnown RBP24.68■■□□□ 1.54
PRRT2-202ENST00000358758 CCDC88BA6NC98 1476 aa24.52■■□□□ 1.52
PRRT2-202ENST00000358758 CADPSQ9ULU8 1353 aa24.49■■□□□ 1.51
PRRT2-202ENST00000358758 ERCC6Q03468 1493 aa24.48■■□□□ 1.51
PRRT2-202ENST00000358758 LAMC3Q9Y6N6 1575 aa24.41■■□□□ 1.5
PRRT2-202ENST00000358758 CFTRP13569 1480 aa24.34■■□□□ 1.49
PRRT2-202ENST00000358758 KIF21AQ7Z4S6 1674 aa24.32■■□□□ 1.48
PRRT2-202ENST00000358758 PDS5BQ9NTI5 1447 aa24.3■■□□□ 1.48
PRRT2-202ENST00000358758 FANCD2Q9BXW9 1451 aa24.23■■□□□ 1.47
PRRT2-202ENST00000358758 THOC2Q8NI27 1593 aaKnown RBP24.14■■□□□ 1.46
PRRT2-202ENST00000358758 CEP164Q9UPV0 1460 aa24.14■■□□□ 1.45
PRRT2-202ENST00000358758 PCGF6Q9BYE7 350 aa24.11■■□□□ 1.45
PRRT2-202ENST00000358758 PPARGC1BQ86YN6 1023 aaKnown RBP24.09■■□□□ 1.45
PRRT2-202ENST00000358758 MRC2Q9UBG0 1479 aa24.05■■□□□ 1.44
PRRT2-202ENST00000358758 URB2Q14146 1524 aaKnown RBP24.01■■□□□ 1.43
PRRT2-202ENST00000358758 PRDM2Q13029 1718 aa24■■□□□ 1.43
PRRT2-202ENST00000358758 CUX2O14529 1486 aa23.99■■□□□ 1.43
PRRT2-202ENST00000358758 CHIC1Q5VXU3 224 aa23.99■■□□□ 1.43
PRRT2-202ENST00000358758 WDR62O43379 1518 aa23.94■■□□□ 1.42
PRRT2-202ENST00000358758 PELP1Q8IZL8 1130 aaKnown RBP23.85■■□□□ 1.41
PRRT2-202ENST00000358758 TOPBP1Q92547 1522 aa23.84■■□□□ 1.41
PRRT2-202ENST00000358758 ABCC8Q09428 1581 aa23.77■■□□□ 1.4
PRRT2-202ENST00000358758 CUX1P39880 1505 aa23.75■■□□□ 1.39
PRRT2-202ENST00000358758 DNMBPQ6XZF7 1577 aa23.74■■□□□ 1.39
PRRT2-202ENST00000358758 RAD54L2Q9Y4B4 1467 aa23.69■■□□□ 1.38
PRRT2-202ENST00000358758 ZNF608Q9ULD9 1512 aaPredicted RBP23.68■■□□□ 1.38
PRRT2-202ENST00000358758 POLA1P09884 1462 aaPredicted RBP23.68■■□□□ 1.38
PRRT2-202ENST00000358758 FGD5Q6ZNL6 1462 aa23.65■■□□□ 1.38
PRRT2-202ENST00000358758 WRNQ14191 1432 aaPredicted RBP eCLIP23.62■■□□□ 1.37
PRRT2-202ENST00000358758 SYNJ1O43426 1573 aa23.6■■□□□ 1.37
PRRT2-202ENST00000358758 SOGA1O94964 1423 aa23.59■■□□□ 1.37
PRRT2-202ENST00000358758 IFT140Q96RY7 1462 aa23.58■■□□□ 1.37
PRRT2-202ENST00000358758 AQRO60306 1485 aaKnown RBP eCLIP23.57■■□□□ 1.363e-9■■■■■ 37.7
PRRT2-202ENST00000358758 TDRD9Q8NDG6 1382 aaKnown RBP23.57■■□□□ 1.36
PRRT2-202ENST00000358758 TARBP1Q13395 1621 aaKnown RBP23.54■■□□□ 1.36
PRRT2-202ENST00000358758 TOP2BQ02880 1626 aa23.47■■□□□ 1.35
PRRT2-202ENST00000358758 EIF4G3O43432 1585 aaKnown RBP23.45■■□□□ 1.34
PRRT2-202ENST00000358758 BIVM-ERCC5R4GMW8 1640 aa23.43■■□□□ 1.34
PRRT2-202ENST00000358758 TRIM26Q12899 539 aaPredicted RBP23.43■■□□□ 1.34
PRRT2-202ENST00000358758 FBLN2P98095 1184 aa23.36■■□□□ 1.33
PRRT2-202ENST00000358758 SCAF1Q9H7N4 1312 aaKnown RBP23.34■■□□□ 1.33
PRRT2-202ENST00000358758 LOC105371045A0A1W2PR82 267 aa23.34■■□□□ 1.33
PRRT2-202ENST00000358758 DNAJC5Q9H3Z4 198 aa23.33■■□□□ 1.33
PRRT2-202ENST00000358758 ABCA10Q8WWZ4 1543 aa23.33■■□□□ 1.32
PRRT2-202ENST00000358758 WDR97A6NE52 1622 aa23.32■■□□□ 1.32
PRRT2-202ENST00000358758 GAPVD1Q14C86 1478 aa23.29■■□□□ 1.32
PRRT2-202ENST00000358758 ZEB1P37275 1124 aaPredicted RBP23.27■■□□□ 1.32
PRRT2-202ENST00000358758 SNAPC4Q5SXM2 1469 aa23.26■■□□□ 1.31
PRRT2-202ENST00000358758 TRIM41Q8WV44 630 aa23.26■■□□□ 1.31
PRRT2-202ENST00000358758 ABCA5Q8WWZ7 1642 aa23.22■■□□□ 1.31
PRRT2-202ENST00000358758 GRIN2BQ13224 1484 aa23.22■■□□□ 1.31
PRRT2-202ENST00000358758 OSCARQ8IYS5 282 aa23.21■■□□□ 1.31
PRRT2-202ENST00000358758 CHMP7Q8WUX9 453 aaPredicted RBP23.17■■□□□ 1.3
PRRT2-202ENST00000358758 PBRM1Q86U86 1689 aa23.17■■□□□ 1.3
PRRT2-202ENST00000358758 RUSC2Q8N2Y8 1516 aa23.15■■□□□ 1.3
PRRT2-202ENST00000358758 CHD1O14646 1710 aa23.14■■□□□ 1.3
PRRT2-202ENST00000358758 MAGI1Q96QZ7 1491 aaPredicted RBP23.09■■□□□ 1.29
PRRT2-202ENST00000358758 KIF27Q86VH2 1401 aa23.06■■□□□ 1.28
PRRT2-202ENST00000358758 IGF1RP08069 1367 aa23.05■■□□□ 1.28
PRRT2-202ENST00000358758 SYNJ2O15056 1496 aa23.05■■□□□ 1.28
PRRT2-202ENST00000358758 ERICH3Q5RHP9 1530 aa23■■□□□ 1.27
PRRT2-202ENST00000358758 FAM9AQ8IZU1 332 aaPredicted RBP23■■□□□ 1.27
PRRT2-202ENST00000358758 ADAMTS12P58397 1594 aa23■■□□□ 1.27
PRRT2-202ENST00000358758 FHAD1B1AJZ9 1412 aa22.97■■□□□ 1.27
PRRT2-202ENST00000358758 GRIN2AQ12879 1464 aa22.95■■□□□ 1.27
PRRT2-202ENST00000358758 MYT1Q01538 1121 aa22.93■■□□□ 1.26
PRRT2-202ENST00000358758 CARMIL1Q5VZK9 1371 aa22.9■■□□□ 1.26
PRRT2-202ENST00000358758 CEP170Q5SW79 1584 aa22.88■■□□□ 1.25
Retrieved 100 of 20,778 RNA–protein pairs in 125.2 ms