RNA–Protein interactions for RNA: ENST00000357710.8

PSEN1-202, Transcript of presenilin 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PSEN1, Length 2,776 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-202ENST00000357710 NISCHQ9Y2I1 1504 aa22.49■■□□□ 1.19
PSEN1-202ENST00000357710 PELP1Q8IZL8 1130 aaKnown RBP20.48■□□□□ 0.87
PSEN1-202ENST00000357710 MYT1Q01538 1121 aa20.25■□□□□ 0.83
PSEN1-202ENST00000357710 CCDC180Q9P1Z9 1646 aa19.74■□□□□ 0.75
PSEN1-202ENST00000357710 TTBK1Q5TCY1 1321 aaPredicted RBP19.52■□□□□ 0.71
PSEN1-202ENST00000357710 ZCCHC6Q5VYS8 1495 aaKnown RBP18.9■□□□□ 0.62
PSEN1-202ENST00000357710 HRCP23327 699 aa18.88■□□□□ 0.61
PSEN1-202ENST00000357710 ABCC9O60706 1549 aa18.65■□□□□ 0.58
PSEN1-202ENST00000357710 DCAF1Q9Y4B6 1507 aa18.64■□□□□ 0.57
PSEN1-202ENST00000357710 DCAF8L2P0C7V8 631 aa18.5■□□□□ 0.55
PSEN1-202ENST00000357710 MYO15BQ96JP2 1530 aa18.46■□□□□ 0.55
PSEN1-202ENST00000357710 ERICH6Q7L0X2 663 aa18.42■□□□□ 0.54
PSEN1-202ENST00000357710 PRKCSHP14314 528 aaPredicted RBP18.41■□□□□ 0.54
PSEN1-202ENST00000357710 NACADO15069 1562 aa18.37■□□□□ 0.53
PSEN1-202ENST00000357710 SCAF1Q9H7N4 1312 aaKnown RBP18.33■□□□□ 0.53
PSEN1-202ENST00000357710 RB1CC1Q8TDY2 1594 aa18.24■□□□□ 0.51
PSEN1-202ENST00000357710 APLP2Q06481 763 aa18.23■□□□□ 0.51
PSEN1-202ENST00000357710 SHROOM4Q9ULL8 1493 aa18.2■□□□□ 0.5
PSEN1-202ENST00000357710 BCL11AQ9H165 835 aa18.12■□□□□ 0.49
PSEN1-202ENST00000357710 SCRIBQ14160 1630 aa18.08■□□□□ 0.48
PSEN1-202ENST00000357710 PPARGC1BQ86YN6 1023 aaKnown RBP17.92■□□□□ 0.46
PSEN1-202ENST00000357710 SLC24A1O60721 1099 aa17.91■□□□□ 0.46
PSEN1-202ENST00000357710 CENPBP07199 599 aaPredicted RBP17.88■□□□□ 0.45
PSEN1-202ENST00000357710 UNC13AQ9UPW8 1703 aa17.86■□□□□ 0.45
PSEN1-202ENST00000357710 FAM9AQ8IZU1 332 aaPredicted RBP17.81■□□□□ 0.44
PSEN1-202ENST00000357710 ACIN1Q9UKV3 1341 aaKnown RBP17.69■□□□□ 0.42
PSEN1-202ENST00000357710 BICRAQ9NZM4 1560 aa17.64■□□□□ 0.41
PSEN1-202ENST00000357710 ZEB1P37275 1124 aaPredicted RBP17.62■□□□□ 0.41
PSEN1-202ENST00000357710 PCGF6Q9BYE7 350 aa17.56■□□□□ 0.4
PSEN1-202ENST00000357710 PABPN1Q86U42 306 aaKnown RBP eCLIP17.5■□□□□ 0.39
PSEN1-202ENST00000357710 SUPT5HO00267 1087 aaKnown RBP17.45■□□□□ 0.38
PSEN1-202ENST00000357710 ANP32EQ9BTT0 268 aa17.44■□□□□ 0.38
PSEN1-202ENST00000357710 CECR2Q9BXF3 1484 aa17.43■□□□□ 0.38
PSEN1-202ENST00000357710 GTF3C3Q9Y5Q9 886 aa17.42■□□□□ 0.38
PSEN1-202ENST00000357710 BAZ1AQ9NRL2 1556 aaPredicted RBP17.41■□□□□ 0.38
PSEN1-202ENST00000357710 DAXXQ9UER7 740 aaPredicted RBP17.4■□□□□ 0.38
PSEN1-202ENST00000357710 RSF1Q96T23 1441 aaPredicted RBP17.37■□□□□ 0.37
PSEN1-202ENST00000357710 NEUROD1Q13562 356 aa17.37■□□□□ 0.37
PSEN1-202ENST00000357710 MROH2BQ7Z745 1585 aa17.34■□□□□ 0.37
PSEN1-202ENST00000357710 SMARCA4P51532 1647 aa17.34■□□□□ 0.37
PSEN1-202ENST00000357710 WIZO95785 1651 aa17.21■□□□□ 0.35
PSEN1-202ENST00000357710 EIF4G1Q04637 1599 aaKnown RBP17.14■□□□□ 0.33
PSEN1-202ENST00000357710 PEG3Q9GZU2 1588 aa17.14■□□□□ 0.33
PSEN1-202ENST00000357710 SMARCA2P51531 1590 aa17.08■□□□□ 0.32
PSEN1-202ENST00000357710 TOP2AP11388 1531 aaKnown RBP17.07■□□□□ 0.32
PSEN1-202ENST00000357710 EIF5BO60841 1220 aaKnown RBP17.07■□□□□ 0.32
PSEN1-202ENST00000357710 CSRNP3Q8WYN3 585 aa17.05■□□□□ 0.32
PSEN1-202ENST00000357710 ATAD2BQ9ULI0 1458 aa17.04■□□□□ 0.32
PSEN1-202ENST00000357710 TRIM26Q12899 539 aaPredicted RBP17.04■□□□□ 0.32
PSEN1-202ENST00000357710 UBE2Q2Q8WVN8 375 aa16.97■□□□□ 0.31
PSEN1-202ENST00000357710 BAZ1BQ9UIG0 1483 aaKnown RBP16.97■□□□□ 0.31
PSEN1-202ENST00000357710 CLSPNQ9HAW4 1339 aa16.94■□□□□ 0.3
PSEN1-202ENST00000357710 HMGXB3Q12766 1538 aa16.94■□□□□ 0.3
PSEN1-202ENST00000357710 NCAPD3P42695 1498 aa16.91■□□□□ 0.3
PSEN1-202ENST00000357710 CC2D2AQ9P2K1 1620 aa16.91■□□□□ 0.3
PSEN1-202ENST00000357710 CCDC88BA6NC98 1476 aa16.84■□□□□ 0.29
PSEN1-202ENST00000357710 MYT1LQ9UL68 1186 aa16.78■□□□□ 0.28
PSEN1-202ENST00000357710 ERICH6BQ5W0A0 696 aa16.71■□□□□ 0.27
PSEN1-202ENST00000357710 ANO8Q9HCE9 1232 aaPredicted RBP16.66■□□□□ 0.26
PSEN1-202ENST00000357710 TSHZ2Q9NRE2 1034 aa16.66■□□□□ 0.26
PSEN1-202ENST00000357710 CHIC1Q5VXU3 224 aa16.65■□□□□ 0.26
PSEN1-202ENST00000357710 DIEXFQ68CQ4 756 aaKnown RBP16.65■□□□□ 0.26
PSEN1-202ENST00000357710 PRDM2Q13029 1718 aa16.52■□□□□ 0.23
PSEN1-202ENST00000357710 CFTRP13569 1480 aa16.51■□□□□ 0.23
PSEN1-202ENST00000357710 AEBP2Q6ZN18 517 aaPredicted RBP16.49■□□□□ 0.23
PSEN1-202ENST00000357710 PKNOX2Q96KN3 472 aa16.49■□□□□ 0.23
PSEN1-202ENST00000357710 ABCC8Q09428 1581 aa16.46■□□□□ 0.23
PSEN1-202ENST00000357710 CADPSQ9ULU8 1353 aa16.46■□□□□ 0.23
PSEN1-202ENST00000357710 TRIM41Q8WV44 630 aa16.44■□□□□ 0.22
PSEN1-202ENST00000357710 PODXL2Q9NZ53 605 aa16.43■□□□□ 0.22
PSEN1-202ENST00000357710 DNAJC5BQ9UF47 199 aa16.42■□□□□ 0.22
PSEN1-202ENST00000357710 SUPT16HQ9Y5B9 1047 aaKnown RBP16.4■□□□□ 0.22
PSEN1-202ENST00000357710 LAMC3Q9Y6N6 1575 aa16.4■□□□□ 0.22
PSEN1-202ENST00000357710 WRNQ14191 1432 aaPredicted RBP eCLIP16.39■□□□□ 0.21
PSEN1-202ENST00000357710 PLEKHG5O94827 1062 aa16.37■□□□□ 0.21
PSEN1-202ENST00000357710 SALL2Q9Y467 1007 aaPredicted RBP16.35■□□□□ 0.21
PSEN1-202ENST00000357710 SYNJ1O43426 1573 aa16.32■□□□□ 0.2
PSEN1-202ENST00000357710 NESP48681 1621 aa16.32■□□□□ 0.2
PSEN1-202ENST00000357710 FANCD2Q9BXW9 1451 aa16.3■□□□□ 0.2
PSEN1-202ENST00000357710 BIVM-ERCC5R4GMW8 1640 aa16.29■□□□□ 0.2
PSEN1-202ENST00000357710 TOP2BQ02880 1626 aa16.29■□□□□ 0.2
PSEN1-202ENST00000357710 PDS5BQ9NTI5 1447 aa16.25■□□□□ 0.19
PSEN1-202ENST00000357710 CUX1P39880 1505 aa16.24■□□□□ 0.19
PSEN1-202ENST00000357710 CEP164Q9UPV0 1460 aa16.23■□□□□ 0.19
PSEN1-202ENST00000357710 DEKP35659 375 aaKnown RBP16.23■□□□□ 0.19
PSEN1-202ENST00000357710 KIF21AQ7Z4S6 1674 aa16.19■□□□□ 0.18
PSEN1-202ENST00000357710 YTHDC1Q96MU7 727 aaKnown RBP16.19■□□□□ 0.18
PSEN1-202ENST00000357710 NEFLP07196 543 aa16.17■□□□□ 0.18
PSEN1-202ENST00000357710 DNMBPQ6XZF7 1577 aa16.17■□□□□ 0.18
PSEN1-202ENST00000357710 FANCIQ9NVI1 1328 aa16.15■□□□□ 0.18
PSEN1-202ENST00000357710 ZNF316A6NFI3 1004 aaPredicted RBP16.14■□□□□ 0.17
PSEN1-202ENST00000357710 EEA1Q15075 1411 aa16.14■□□□□ 0.17
PSEN1-202ENST00000357710 RBM19Q9Y4C8 960 aaKnown RBP16.14■□□□□ 0.17
PSEN1-202ENST00000357710 CCDC136Q96JN2 1154 aa16.13■□□□□ 0.17
PSEN1-202ENST00000357710 TOPBP1Q92547 1522 aa16.11■□□□□ 0.17
PSEN1-202ENST00000357710 SOGA1O94964 1423 aa16.1■□□□□ 0.17
PSEN1-202ENST00000357710 FGD5Q6ZNL6 1462 aa16.09■□□□□ 0.17
PSEN1-202ENST00000357710 URB2Q14146 1524 aaKnown RBP16.08■□□□□ 0.17
PSEN1-202ENST00000357710 MRC2Q9UBG0 1479 aa16.06■□□□□ 0.16
PSEN1-202ENST00000357710 GLIPR1L2Q4G1C9 344 aa16.05■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 11.9 ms