RNA–Protein interactions for RNA: ENST00000357115.7

LRBA-201, Transcript of LPS responsive beige-like anchor protein, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene LRBA, Length 9,899 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRBA-201ENST00000357115 NISCHQ9Y2I1 1504 aa11.17□□□□□ -0.62
LRBA-201ENST00000357115 DCAF8L2P0C7V8 631 aa11.13□□□□□ -0.63
LRBA-201ENST00000357115 PELP1Q8IZL8 1130 aaKnown RBP10.92□□□□□ -0.66
LRBA-201ENST00000357115 FAM9AQ8IZU1 332 aaPredicted RBP10.84□□□□□ -0.67
LRBA-201ENST00000357115 APLP2Q06481 763 aa10.59□□□□□ -0.71
LRBA-201ENST00000357115 SUPT5HO00267 1087 aaKnown RBP10.48□□□□□ -0.73
LRBA-201ENST00000357115 CCER1Q8TC90 406 aaPredicted RBP10.39□□□□□ -0.75
LRBA-201ENST00000357115 ZEB1P37275 1124 aaPredicted RBP10.31□□□□□ -0.76
LRBA-201ENST00000357115 SHROOM4Q9ULL8 1493 aa10.23□□□□□ -0.77
LRBA-201ENST00000357115 CENPBP07199 599 aaPredicted RBP10.18□□□□□ -0.78
LRBA-201ENST00000357115 MYT1Q01538 1121 aa10.17□□□□□ -0.78
LRBA-201ENST00000357115 ERICH6Q7L0X2 663 aa10.08□□□□□ -0.8
LRBA-201ENST00000357115 NEFLP07196 543 aa10.02□□□□□ -0.81
LRBA-201ENST00000357115 YTHDC1Q96MU7 727 aaKnown RBP10.02□□□□□ -0.81
LRBA-201ENST00000357115 TRIM41Q8WV44 630 aa9.99□□□□□ -0.81
LRBA-201ENST00000357115 UBTFP17480 764 aaKnown RBP9.91□□□□□ -0.82
LRBA-201ENST00000357115 CCDC180Q9P1Z9 1646 aa9.89□□□□□ -0.83
LRBA-201ENST00000357115 EHMT2Q96KQ7 1210 aa9.84□□□□□ -0.83
LRBA-201ENST00000357115 ATP1B4Q9UN42 357 aaPredicted RBP9.84□□□□□ -0.83
LRBA-201ENST00000357115 DAXXQ9UER7 740 aaPredicted RBP9.83□□□□□ -0.84
LRBA-201ENST00000357115 PCGF6Q9BYE7 350 aa9.83□□□□□ -0.84
LRBA-201ENST00000357115 TRIM26Q12899 539 aaPredicted RBP9.71□□□□□ -0.86
LRBA-201ENST00000357115 MYT1LQ9UL68 1186 aa9.64□□□□□ -0.87
LRBA-201ENST00000357115 RANGAP1P46060 587 aaPredicted RBP9.62□□□□□ -0.87
LRBA-201ENST00000357115 TTBK1Q5TCY1 1321 aaPredicted RBP9.6□□□□□ -0.87
LRBA-201ENST00000357115 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP9.58□□□□□ -0.88
LRBA-201ENST00000357115 HNRNPUL2Q1KMD3 747 aaKnown RBP9.58□□□□□ -0.88
LRBA-201ENST00000357115 ZNF316A6NFI3 1004 aaPredicted RBP9.52□□□□□ -0.89
LRBA-201ENST00000357115 NEFMP07197 916 aa9.52□□□□□ -0.89
LRBA-201ENST00000357115 ACIN1Q9UKV3 1341 aaKnown RBP9.49□□□□□ -0.89
LRBA-201ENST00000357115 ZBTB47Q9UFB7 747 aaPredicted RBP9.48□□□□□ -0.89
LRBA-201ENST00000357115 RTL5Q5HYW3 569 aaPredicted RBP9.48□□□□□ -0.89
LRBA-201ENST00000357115 CLSPNQ9HAW4 1339 aa9.45□□□□□ -0.9
LRBA-201ENST00000357115 CDK11AQ9UQ88 783 aaPredicted RBP9.4□□□□□ -0.9
LRBA-201ENST00000357115 RB1CC1Q8TDY2 1594 aa9.4□□□□□ -0.9
LRBA-201ENST00000357115 SLC4A1APQ9BWU0 796 aaKnown RBP9.4□□□□□ -0.91
LRBA-201ENST00000357115 POLR3GLQ9BT43 218 aa9.36□□□□□ -0.91
LRBA-201ENST00000357115 ABCC9O60706 1549 aa9.36□□□□□ -0.91
LRBA-201ENST00000357115 HRCP23327 699 aa9.36□□□□□ -0.91
LRBA-201ENST00000357115 ITGAEP38570 1179 aa9.34□□□□□ -0.91
LRBA-201ENST00000357115 SCRIBQ14160 1630 aa9.33□□□□□ -0.92
LRBA-201ENST00000357115 ANP32CO43423 234 aa9.32□□□□□ -0.92
LRBA-201ENST00000357115 NACADO15069 1562 aa9.32□□□□□ -0.92
LRBA-201ENST00000357115 FAM50AQ14320 339 aaKnown RBP9.31□□□□□ -0.92
LRBA-201ENST00000357115 DIEXFQ68CQ4 756 aaKnown RBP9.29□□□□□ -0.92
LRBA-201ENST00000357115 TRIM52Q96A61 297 aa9.27□□□□□ -0.93
LRBA-201ENST00000357115 ESF1Q9H501 851 aaKnown RBP9.26□□□□□ -0.93
LRBA-201ENST00000357115 ANP32BQ92688 251 aaKnown RBP9.26□□□□□ -0.93
LRBA-201ENST00000357115 CHIC1Q5VXU3 224 aa9.26□□□□□ -0.93
LRBA-201ENST00000357115 EIF5BO60841 1220 aaKnown RBP9.24□□□□□ -0.93
LRBA-201ENST00000357115 CANXP27824 592 aaKnown RBP9.23□□□□□ -0.93
LRBA-201ENST00000357115 ZCCHC6Q5VYS8 1495 aaKnown RBP9.22□□□□□ -0.93
LRBA-201ENST00000357115 UPF2Q9HAU5 1272 aaKnown RBP9.22□□□□□ -0.93
LRBA-201ENST00000357115 KAT6BQ8WYB5 2073 aa9.2□□□□□ -0.94
LRBA-201ENST00000357115 ANP32AP39687 249 aaKnown RBP9.18□□□□□ -0.94
LRBA-201ENST00000357115 EEA1Q15075 1411 aa9.17□□□□□ -0.94
LRBA-201ENST00000357115 NPM1P06748 294 aaKnown RBP eCLIP9.17□□□□□ -0.94
LRBA-201ENST00000357115 SLC24A1O60721 1099 aa9.16□□□□□ -0.94
LRBA-201ENST00000357115 BCANQ96GW7 911 aa9.15□□□□□ -0.95
LRBA-201ENST00000357115 DCAF1Q9Y4B6 1507 aa9.14□□□□□ -0.95
LRBA-201ENST00000357115 PPARGC1BQ86YN6 1023 aaKnown RBP9.13□□□□□ -0.95
LRBA-201ENST00000357115 GOLGA6L2Q8N9W4 650 aaPredicted RBP9.13□□□□□ -0.95
LRBA-201ENST00000357115 TONSLQ96HA7 1378 aa9.13□□□□□ -0.95
LRBA-201ENST00000357115 FBLN2P98095 1184 aa9.12□□□□□ -0.95
LRBA-201ENST00000357115 RSF1Q96T23 1441 aaPredicted RBP9.11□□□□□ -0.95
LRBA-201ENST00000357115 HSP90AA1P07900 732 aaKnown RBP9.1□□□□□ -0.95
LRBA-201ENST00000357115 ANP32EQ9BTT0 268 aa9.09□□□□□ -0.95
LRBA-201ENST00000357115 STAG3Q9UJ98 1225 aa9.08□□□□□ -0.96
LRBA-201ENST00000357115 NEUROD1Q13562 356 aa9.08□□□□□ -0.96
LRBA-201ENST00000357115 GLIPR1L2Q4G1C9 344 aa9.08□□□□□ -0.96
LRBA-201ENST00000357115 LOC105371045A0A1W2PR82 267 aa9.08□□□□□ -0.96
LRBA-201ENST00000357115 CSRNP3Q8WYN3 585 aa9.07□□□□□ -0.96
LRBA-201ENST00000357115 BAZ1AQ9NRL2 1556 aaPredicted RBP9.05□□□□□ -0.96
LRBA-201ENST00000357115 PABPN1Q86U42 306 aaKnown RBP eCLIP9.05□□□□□ -0.96
LRBA-201ENST00000357115 ZNF326Q5BKZ1 582 aaKnown RBP9.05□□□□□ -0.96
LRBA-201ENST00000357115 MYH16Q9H6N6 1097 aa9.04□□□□□ -0.96
LRBA-201ENST00000357115 CDCA8Q53HL2 280 aa9.03□□□□□ -0.96
LRBA-201ENST00000357115 CDK11BP21127 795 aaKnown RBP9.03□□□□□ -0.96
LRBA-201ENST00000357115 TSPY4P0CV99 314 aa9.02□□□□□ -0.97
LRBA-201ENST00000357115 TSPY10P0CW01 314 aa9.02□□□□□ -0.97
LRBA-201ENST00000357115 NPM2Q86SE8 214 aaKnown RBP9.01□□□□□ -0.97
LRBA-201ENST00000357115 MTUS2Q5JR59 1369 aa9□□□□□ -0.97
LRBA-201ENST00000357115 CNGB1Q14028 1251 aaPredicted RBP9□□□□□ -0.97
LRBA-201ENST00000357115 CHMP4BQ9H444 224 aaKnown RBP9□□□□□ -0.97
LRBA-201ENST00000357115 BAZ1BQ9UIG0 1483 aaKnown RBP8.99□□□□□ -0.97
LRBA-201ENST00000357115 GOLGA3Q08378 1498 aa8.98□□□□□ -0.97
LRBA-201ENST00000357115 SMARCA2P51531 1590 aa8.97□□□□□ -0.97
LRBA-201ENST00000357115 FHAD1B1AJZ9 1412 aa8.97□□□□□ -0.97
LRBA-201ENST00000357115 WDR43Q15061 677 aaKnown RBP eCLIP8.97□□□□□ -0.971e-6■■□□□ 11.8
LRBA-201ENST00000357115 TMC1Q8TDI8 760 aa8.95□□□□□ -0.98
LRBA-201ENST00000357115 KIF27Q86VH2 1401 aa8.94□□□□□ -0.98
LRBA-201ENST00000357115 BECN1Q14457 450 aa8.94□□□□□ -0.98
LRBA-201ENST00000357115 ZNF777Q9ULD5 760 aaPredicted RBP8.94□□□□□ -0.98
LRBA-201ENST00000357115 PNNQ9H307 717 aaKnown RBP8.94□□□□□ -0.98
LRBA-201ENST00000357115 CEP164Q9UPV0 1460 aa8.94□□□□□ -0.98
LRBA-201ENST00000357115 CFAP44Q96MT7 982 aa8.93□□□□□ -0.98
LRBA-201ENST00000357115 CASC1Q6TDU7 716 aa8.93□□□□□ -0.98
LRBA-201ENST00000357115 CLIP1P30622 1438 aa8.93□□□□□ -0.98
LRBA-201ENST00000357115 CHMP7Q8WUX9 453 aaPredicted RBP8.92□□□□□ -0.98
LRBA-201ENST00000357115 GOLGA6L22H0YM25 854 aa8.91□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms