RNA–Protein interactions for RNA: ENST00000356937.7

CDK11A-202, Transcript of cyclin dependent kinase 11A, humanhuman

TSL 1 (best)

Gene CDK11A, Length 2,275 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK11A-202ENST00000356937 NISCHQ9Y2I1 1504 aa41.15■■■■■ 4.18
CDK11A-202ENST00000356937 CCDC180Q9P1Z9 1646 aa35.95■■■■□ 3.35
CDK11A-202ENST00000356937 ZCCHC6Q5VYS8 1495 aaKnown RBP34.5■■■■□ 3.11
CDK11A-202ENST00000356937 ABCC9O60706 1549 aa34.33■■■■□ 3.09
CDK11A-202ENST00000356937 DCAF8L2P0C7V8 631 aa34.24■■■■□ 3.07
CDK11A-202ENST00000356937 DCAF1Q9Y4B6 1507 aa33.96■■■■□ 3.03
CDK11A-202ENST00000356937 MYO15BQ96JP2 1530 aa33.63■■■□□ 2.97
CDK11A-202ENST00000356937 NACADO15069 1562 aa33.56■■■□□ 2.96
CDK11A-202ENST00000356937 SHROOM4Q9ULL8 1493 aa33.53■■■□□ 2.96
CDK11A-202ENST00000356937 RB1CC1Q8TDY2 1594 aa33.35■■■□□ 2.93
CDK11A-202ENST00000356937 SCRIBQ14160 1630 aa33.12■■■□□ 2.89
CDK11A-202ENST00000356937 UNC13AQ9UPW8 1703 aa32.7■■■□□ 2.83
CDK11A-202ENST00000356937 PABPN1Q86U42 306 aaKnown RBP eCLIP32.37■■■□□ 2.77
CDK11A-202ENST00000356937 BICRAQ9NZM4 1560 aa32.35■■■□□ 2.77
CDK11A-202ENST00000356937 SUPT5HO00267 1087 aaKnown RBP32.15■■■□□ 2.74
CDK11A-202ENST00000356937 CECR2Q9BXF3 1484 aa32.04■■■□□ 2.72
CDK11A-202ENST00000356937 RSF1Q96T23 1441 aaPredicted RBP31.85■■■□□ 2.69
CDK11A-202ENST00000356937 MROH2BQ7Z745 1585 aa31.81■■■□□ 2.68
CDK11A-202ENST00000356937 BAZ1AQ9NRL2 1556 aaPredicted RBP31.79■■■□□ 2.68
CDK11A-202ENST00000356937 SMARCA4P51532 1647 aa31.69■■■□□ 2.66
CDK11A-202ENST00000356937 WIZO95785 1651 aa31.56■■■□□ 2.64
CDK11A-202ENST00000356937 EIF4G1Q04637 1599 aaKnown RBP31.41■■■□□ 2.62
CDK11A-202ENST00000356937 PEG3Q9GZU2 1588 aa31.26■■■□□ 2.59
CDK11A-202ENST00000356937 ATAD2BQ9ULI0 1458 aa31.23■■■□□ 2.59
CDK11A-202ENST00000356937 SMARCA2P51531 1590 aa31.2■■■□□ 2.58
CDK11A-202ENST00000356937 TOP2AP11388 1531 aaKnown RBP31.17■■■□□ 2.58
CDK11A-202ENST00000356937 BAZ1BQ9UIG0 1483 aaKnown RBP31.06■■■□□ 2.56
CDK11A-202ENST00000356937 CC2D2AQ9P2K1 1620 aa31.03■■■□□ 2.56
CDK11A-202ENST00000356937 NCAPD3P42695 1498 aa30.98■■■□□ 2.55
CDK11A-202ENST00000356937 HMGXB3Q12766 1538 aa30.9■■■□□ 2.54
CDK11A-202ENST00000356937 CCDC88BA6NC98 1476 aa30.88■■■□□ 2.53
CDK11A-202ENST00000356937 CHIC1Q5VXU3 224 aa30.58■■■□□ 2.49
CDK11A-202ENST00000356937 DNAJC5BQ9UF47 199 aa30.52■■■□□ 2.48
CDK11A-202ENST00000356937 CFTRP13569 1480 aa30.24■■■□□ 2.43
CDK11A-202ENST00000356937 TRIM41Q8WV44 630 aa30.21■■■□□ 2.43
CDK11A-202ENST00000356937 CADPSQ9ULU8 1353 aa30.2■■■□□ 2.43
CDK11A-202ENST00000356937 ABCC8Q09428 1581 aa30.19■■■□□ 2.42
CDK11A-202ENST00000356937 NESP48681 1621 aa30.06■■■□□ 2.4
CDK11A-202ENST00000356937 PRDM2Q13029 1718 aa30.06■■■□□ 2.4
CDK11A-202ENST00000356937 WRNQ14191 1432 aaPredicted RBP eCLIP30■■■□□ 2.39
CDK11A-202ENST00000356937 LAMC3Q9Y6N6 1575 aa29.97■■■□□ 2.39
CDK11A-202ENST00000356937 FANCD2Q9BXW9 1451 aa29.88■■■□□ 2.37
CDK11A-202ENST00000356937 SYNJ1O43426 1573 aa29.88■■■□□ 2.37
CDK11A-202ENST00000356937 PDS5BQ9NTI5 1447 aa29.78■■■□□ 2.36
CDK11A-202ENST00000356937 CUX1P39880 1505 aa29.75■■■□□ 2.35
CDK11A-202ENST00000356937 TOP2BQ02880 1626 aa29.75■■■□□ 2.35
CDK11A-202ENST00000356937 FAM9AQ8IZU1 332 aaPredicted RBP29.71■■■□□ 2.35
CDK11A-202ENST00000356937 BIVM-ERCC5R4GMW8 1640 aa29.71■■■□□ 2.35
CDK11A-202ENST00000356937 CEP164Q9UPV0 1460 aa29.71■■■□□ 2.35
CDK11A-202ENST00000356937 KIF21AQ7Z4S6 1674 aa29.67■■■□□ 2.34
CDK11A-202ENST00000356937 SOGA1O94964 1423 aa29.57■■■□□ 2.32
CDK11A-202ENST00000356937 DNMBPQ6XZF7 1577 aa29.54■■■□□ 2.32
CDK11A-202ENST00000356937 TOPBP1Q92547 1522 aa29.52■■■□□ 2.32
CDK11A-202ENST00000356937 URB2Q14146 1524 aaKnown RBP29.51■■■□□ 2.32
CDK11A-202ENST00000356937 RUSC2Q8N2Y8 1516 aa29.48■■■□□ 2.31
CDK11A-202ENST00000356937 FGD5Q6ZNL6 1462 aa29.47■■■□□ 2.31
CDK11A-202ENST00000356937 LOC105371045A0A1W2PR82 267 aa29.47■■■□□ 2.31
CDK11A-202ENST00000356937 ERCC6Q03468 1493 aa29.46■■■□□ 2.31
CDK11A-202ENST00000356937 MRC2Q9UBG0 1479 aa29.4■■■□□ 2.3
CDK11A-202ENST00000356937 EEA1Q15075 1411 aa29.39■■■□□ 2.3
CDK11A-202ENST00000356937 POLA1P09884 1462 aaPredicted RBP29.36■■■□□ 2.29
CDK11A-202ENST00000356937 EHMT2Q96KQ7 1210 aa29.36■■■□□ 2.29
CDK11A-202ENST00000356937 CSRNP3Q8WYN3 585 aa29.33■■■□□ 2.29
CDK11A-202ENST00000356937 RAD54L2Q9Y4B4 1467 aa29.3■■■□□ 2.28
CDK11A-202ENST00000356937 CUX2O14529 1486 aa29.26■■■□□ 2.27
CDK11A-202ENST00000356937 KIF27Q86VH2 1401 aa29.25■■■□□ 2.27
CDK11A-202ENST00000356937 WDR62O43379 1518 aa29.23■■■□□ 2.27
CDK11A-202ENST00000356937 THOC2Q8NI27 1593 aaKnown RBP29.21■■■□□ 2.27
CDK11A-202ENST00000356937 ABCA10Q8WWZ4 1543 aa29.18■■■□□ 2.26
CDK11A-202ENST00000356937 WDR97A6NE52 1622 aa29.09■■■□□ 2.25
CDK11A-202ENST00000356937 TARBP1Q13395 1621 aaKnown RBP29.08■■■□□ 2.25
CDK11A-202ENST00000356937 TDRD9Q8NDG6 1382 aaKnown RBP29.06■■■□□ 2.24
CDK11A-202ENST00000356937 KIF21BO75037 1637 aa29.03■■■□□ 2.24
CDK11A-202ENST00000356937 IGF1RP08069 1367 aa29.02■■■□□ 2.24
CDK11A-202ENST00000356937 GOLGA3Q08378 1498 aa29.01■■■□□ 2.23
CDK11A-202ENST00000356937 IFT140Q96RY7 1462 aa29■■■□□ 2.23
CDK11A-202ENST00000356937 UBTFP17480 764 aaKnown RBP28.99■■■□□ 2.23
CDK11A-202ENST00000356937 PRXQ9BXM0 1461 aa28.97■■■□□ 2.23
CDK11A-202ENST00000356937 RAPGEF2Q9Y4G8 1499 aa28.97■■■□□ 2.23
CDK11A-202ENST00000356937 ABCA5Q8WWZ7 1642 aa28.96■■■□□ 2.23
CDK11A-202ENST00000356937 GAPVD1Q14C86 1478 aa28.95■■■□□ 2.23
CDK11A-202ENST00000356937 AQRO60306 1485 aaKnown RBP eCLIP28.9■■■□□ 2.223e-7■■□□□ 13.7
CDK11A-202ENST00000356937 ZNF608Q9ULD9 1512 aaPredicted RBP28.89■■■□□ 2.22
CDK11A-202ENST00000356937 CARMIL1Q5VZK9 1371 aa28.89■■■□□ 2.22
CDK11A-202ENST00000356937 ERICH3Q5RHP9 1530 aa28.87■■■□□ 2.21
CDK11A-202ENST00000356937 TNIKQ9UKE5 1360 aa28.87■■■□□ 2.21
CDK11A-202ENST00000356937 PBRM1Q86U86 1689 aa28.79■■■□□ 2.2
CDK11A-202ENST00000356937 CUL7Q14999 1698 aa28.79■■■□□ 2.2
CDK11A-202ENST00000356937 EIF4G3O43432 1585 aaKnown RBP28.76■■■□□ 2.19
CDK11A-202ENST00000356937 GRIN2BQ13224 1484 aa28.74■■■□□ 2.19
CDK11A-202ENST00000356937 CEP162Q5TB80 1403 aa28.72■■■□□ 2.19
CDK11A-202ENST00000356937 RANGAP1P46060 587 aaPredicted RBP28.67■■■□□ 2.18
CDK11A-202ENST00000356937 FHAD1B1AJZ9 1412 aa28.61■■■□□ 2.17
CDK11A-202ENST00000356937 SNAPC4Q5SXM2 1469 aa28.61■■■□□ 2.17
CDK11A-202ENST00000356937 ADAMTS12P58397 1594 aa28.61■■■□□ 2.17
CDK11A-202ENST00000356937 CLIP1P30622 1438 aa28.56■■■□□ 2.16
CDK11A-202ENST00000356937 MAGI1Q96QZ7 1491 aaPredicted RBP28.51■■■□□ 2.16
CDK11A-202ENST00000356937 CTTNBP2Q8WZ74 1663 aa28.45■■■□□ 2.15
CDK11A-202ENST00000356937 FBLN2P98095 1184 aa28.44■■■□□ 2.14
CDK11A-202ENST00000356937 CHMP7Q8WUX9 453 aaPredicted RBP28.44■■■□□ 2.14
Retrieved 100 of 20,778 RNA–protein pairs in 129.8 ms