RNA–Protein interactions for RNA: ENST00000356738.6

APBB3-202, Transcript of amyloid beta precursor protein binding family B member 3, humanhuman

TSL 1 (best) BASIC

Gene APBB3, Length 1,804 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APBB3-202ENST00000356738 NISCHQ9Y2I1 1504 aa32.98■■■□□ 2.87
APBB3-202ENST00000356738 CCDC180Q9P1Z9 1646 aa29.4■■■□□ 2.3
APBB3-202ENST00000356738 ABCC9O60706 1549 aa29.08■■■□□ 2.25
APBB3-202ENST00000356738 RB1CC1Q8TDY2 1594 aa27.75■■■□□ 2.03
APBB3-202ENST00000356738 DCAF8L2P0C7V8 631 aa27.68■■■□□ 2.02
APBB3-202ENST00000356738 NACADO15069 1562 aa27.64■■■□□ 2.02
APBB3-202ENST00000356738 ZCCHC6Q5VYS8 1495 aaKnown RBP27.45■■□□□ 1.98
APBB3-202ENST00000356738 MYO15BQ96JP2 1530 aa27.35■■□□□ 1.97
APBB3-202ENST00000356738 UNC13AQ9UPW8 1703 aa27.33■■□□□ 1.97
APBB3-202ENST00000356738 DCAF1Q9Y4B6 1507 aa27.18■■□□□ 1.94
APBB3-202ENST00000356738 PABPN1Q86U42 306 aaKnown RBP eCLIP27.13■■□□□ 1.93
APBB3-202ENST00000356738 BICRAQ9NZM4 1560 aa27.05■■□□□ 1.92
APBB3-202ENST00000356738 SCRIBQ14160 1630 aa26.94■■□□□ 1.9
APBB3-202ENST00000356738 DNAJC5BQ9UF47 199 aa26.93■■□□□ 1.9
APBB3-202ENST00000356738 SHROOM4Q9ULL8 1493 aa26.5■■□□□ 1.83
APBB3-202ENST00000356738 EIF4G1Q04637 1599 aaKnown RBP26.31■■□□□ 1.8
APBB3-202ENST00000356738 CC2D2AQ9P2K1 1620 aa26.28■■□□□ 1.8
APBB3-202ENST00000356738 CECR2Q9BXF3 1484 aa26.09■■□□□ 1.77
APBB3-202ENST00000356738 SMARCA4P51532 1647 aa25.68■■□□□ 1.7
APBB3-202ENST00000356738 ATAD2BQ9ULI0 1458 aa25.56■■□□□ 1.68
APBB3-202ENST00000356738 BAZ1AQ9NRL2 1556 aaPredicted RBP25.55■■□□□ 1.68
APBB3-202ENST00000356738 NCAPD3P42695 1498 aa25.52■■□□□ 1.68
APBB3-202ENST00000356738 MROH2BQ7Z745 1585 aa25.49■■□□□ 1.67
APBB3-202ENST00000356738 SMARCA2P51531 1590 aa25.46■■□□□ 1.67
APBB3-202ENST00000356738 HMGXB3Q12766 1538 aa25.4■■□□□ 1.66
APBB3-202ENST00000356738 PEG3Q9GZU2 1588 aa25.37■■□□□ 1.65
APBB3-202ENST00000356738 BAZ1BQ9UIG0 1483 aaKnown RBP25.33■■□□□ 1.65
APBB3-202ENST00000356738 WIZO95785 1651 aa25.25■■□□□ 1.63
APBB3-202ENST00000356738 NESP48681 1621 aa25.14■■□□□ 1.62
APBB3-202ENST00000356738 RSF1Q96T23 1441 aaPredicted RBP25.07■■□□□ 1.6
APBB3-202ENST00000356738 ERCC6Q03468 1493 aa25■■□□□ 1.59
APBB3-202ENST00000356738 LAMC3Q9Y6N6 1575 aa24.9■■□□□ 1.58
APBB3-202ENST00000356738 TOP2AP11388 1531 aaKnown RBP24.85■■□□□ 1.57
APBB3-202ENST00000356738 KIF21AQ7Z4S6 1674 aa24.85■■□□□ 1.57
APBB3-202ENST00000356738 THOC2Q8NI27 1593 aaKnown RBP24.77■■□□□ 1.56
APBB3-202ENST00000356738 CADPSQ9ULU8 1353 aa24.77■■□□□ 1.56
APBB3-202ENST00000356738 CUX2O14529 1486 aa24.75■■□□□ 1.55
APBB3-202ENST00000356738 PDS5BQ9NTI5 1447 aa24.68■■□□□ 1.54
APBB3-202ENST00000356738 CFTRP13569 1480 aa24.6■■□□□ 1.53
APBB3-202ENST00000356738 CCDC88BA6NC98 1476 aa24.6■■□□□ 1.53
APBB3-202ENST00000356738 FANCD2Q9BXW9 1451 aa24.54■■□□□ 1.52
APBB3-202ENST00000356738 MRC2Q9UBG0 1479 aa24.51■■□□□ 1.51
APBB3-202ENST00000356738 CEP164Q9UPV0 1460 aa24.51■■□□□ 1.51
APBB3-202ENST00000356738 PRDM2Q13029 1718 aa24.48■■□□□ 1.51
APBB3-202ENST00000356738 WDR62O43379 1518 aa24.47■■□□□ 1.51
APBB3-202ENST00000356738 URB2Q14146 1524 aaKnown RBP24.36■■□□□ 1.49
APBB3-202ENST00000356738 SUPT5HO00267 1087 aaKnown RBP24.31■■□□□ 1.48
APBB3-202ENST00000356738 DNAJC5Q9H3Z4 198 aa24.27■■□□□ 1.48
APBB3-202ENST00000356738 TOPBP1Q92547 1522 aa24.14■■□□□ 1.45
APBB3-202ENST00000356738 DNMBPQ6XZF7 1577 aa24.07■■□□□ 1.44
APBB3-202ENST00000356738 ZNF608Q9ULD9 1512 aaPredicted RBP24.02■■□□□ 1.44
APBB3-202ENST00000356738 IFT140Q96RY7 1462 aa23.96■■□□□ 1.43
APBB3-202ENST00000356738 ABCC8Q09428 1581 aa23.96■■□□□ 1.43
APBB3-202ENST00000356738 POLA1P09884 1462 aaPredicted RBP23.93■■□□□ 1.42
APBB3-202ENST00000356738 TARBP1Q13395 1621 aaKnown RBP23.93■■□□□ 1.42
APBB3-202ENST00000356738 CUX1P39880 1505 aa23.92■■□□□ 1.42
APBB3-202ENST00000356738 EIF4G3O43432 1585 aaKnown RBP23.9■■□□□ 1.42
APBB3-202ENST00000356738 RAD54L2Q9Y4B4 1467 aa23.88■■□□□ 1.41
APBB3-202ENST00000356738 FGD5Q6ZNL6 1462 aa23.85■■□□□ 1.41
APBB3-202ENST00000356738 AQRO60306 1485 aaKnown RBP eCLIP23.82■■□□□ 1.42e-6■■■■■ 39.8
APBB3-202ENST00000356738 SOGA1O94964 1423 aa23.77■■□□□ 1.4
APBB3-202ENST00000356738 TDRD9Q8NDG6 1382 aaKnown RBP23.73■■□□□ 1.39
APBB3-202ENST00000356738 WDR97A6NE52 1622 aa23.71■■□□□ 1.39
APBB3-202ENST00000356738 SYNJ1O43426 1573 aa23.68■■□□□ 1.38
APBB3-202ENST00000356738 CHD1O14646 1710 aa23.68■■□□□ 1.38
APBB3-202ENST00000356738 OSCARQ8IYS5 282 aa23.67■■□□□ 1.38
APBB3-202ENST00000356738 BIVM-ERCC5R4GMW8 1640 aa23.63■■□□□ 1.37
APBB3-202ENST00000356738 TOP2BQ02880 1626 aa23.61■■□□□ 1.37
APBB3-202ENST00000356738 WRNQ14191 1432 aaPredicted RBP eCLIP23.6■■□□□ 1.37
APBB3-202ENST00000356738 SNAPC4Q5SXM2 1469 aa23.58■■□□□ 1.37
APBB3-202ENST00000356738 PBRM1Q86U86 1689 aa23.56■■□□□ 1.36
APBB3-202ENST00000356738 CHIC1Q5VXU3 224 aa23.56■■□□□ 1.36
APBB3-202ENST00000356738 ABCA10Q8WWZ4 1543 aa23.55■■□□□ 1.36
APBB3-202ENST00000356738 ABCA5Q8WWZ7 1642 aa23.54■■□□□ 1.36
APBB3-202ENST00000356738 FBLN2P98095 1184 aa23.54■■□□□ 1.36
APBB3-202ENST00000356738 GAPVD1Q14C86 1478 aa23.5■■□□□ 1.35
APBB3-202ENST00000356738 GRIN2BQ13224 1484 aa23.5■■□□□ 1.35
APBB3-202ENST00000356738 TRIM41Q8WV44 630 aa23.47■■□□□ 1.35
APBB3-202ENST00000356738 RIMBP3CA6NJZ7 1639 aa23.47■■□□□ 1.35
APBB3-202ENST00000356738 RIMBP3BA6NNM3 1639 aa23.47■■□□□ 1.35
APBB3-202ENST00000356738 RIMBP3Q9UFD9 1639 aa23.47■■□□□ 1.35
APBB3-202ENST00000356738 MAGI1Q96QZ7 1491 aaPredicted RBP23.45■■□□□ 1.34
APBB3-202ENST00000356738 ARHGEF11O15085 1522 aa23.4■■□□□ 1.34
APBB3-202ENST00000356738 SYNJ2O15056 1496 aa23.39■■□□□ 1.33
APBB3-202ENST00000356738 CHMP7Q8WUX9 453 aaPredicted RBP23.36■■□□□ 1.33
APBB3-202ENST00000356738 CLASP1Q7Z460 1538 aa23.34■■□□□ 1.33
APBB3-202ENST00000356738 ADAMTS12P58397 1594 aa23.33■■□□□ 1.33
APBB3-202ENST00000356738 GRIN2AQ12879 1464 aa23.24■■□□□ 1.31
APBB3-202ENST00000356738 ERICH3Q5RHP9 1530 aa23.24■■□□□ 1.31
APBB3-202ENST00000356738 ARAP1Q96P48 1450 aa23.23■■□□□ 1.31
APBB3-202ENST00000356738 CEP170Q5SW79 1584 aa23.21■■□□□ 1.31
APBB3-202ENST00000356738 FHAD1B1AJZ9 1412 aa23.18■■□□□ 1.3
APBB3-202ENST00000356738 CYB5RLQ6IPT4 315 aa23.18■■□□□ 1.3
APBB3-202ENST00000356738 NUP160Q12769 1436 aa23.13■■□□□ 1.29
APBB3-202ENST00000356738 ERCC6L2Q5T890 1561 aa23.12■■□□□ 1.29
APBB3-202ENST00000356738 KIF27Q86VH2 1401 aa23.08■■□□□ 1.29
APBB3-202ENST00000356738 IGF1RP08069 1367 aa23.06■■□□□ 1.28
APBB3-202ENST00000356738 SHROOM2Q13796 1616 aa23.02■■□□□ 1.28
APBB3-202ENST00000356738 CUL7Q14999 1698 aa23.01■■□□□ 1.27
APBB3-202ENST00000356738 RUSC2Q8N2Y8 1516 aa23.01■■□□□ 1.27
Retrieved 100 of 20,778 RNA–protein pairs in 7.5 ms