RNA–Protein interactions for RNA: ENST00000354656.3

ZNF44-201, Transcript of zinc finger protein 44, humanhuman

TSL 3

Gene ZNF44, Length 517 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF44-201ENST00000354656 NISCHQ9Y2I1 1504 aa29.01■■■□□ 2.23
ZNF44-201ENST00000354656 ABCC9O60706 1549 aa26.62■■□□□ 1.85
ZNF44-201ENST00000354656 CCDC180Q9P1Z9 1646 aa26.27■■□□□ 1.8
ZNF44-201ENST00000354656 DNAJC5BQ9UF47 199 aa25.28■■□□□ 1.64
ZNF44-201ENST00000354656 RB1CC1Q8TDY2 1594 aa25.18■■□□□ 1.62
ZNF44-201ENST00000354656 NACADO15069 1562 aa24.9■■□□□ 1.58
ZNF44-201ENST00000354656 DCAF8L2P0C7V8 631 aa24.73■■□□□ 1.55
ZNF44-201ENST00000354656 PABPN1Q86U42 306 aaKnown RBP eCLIP24.67■■□□□ 1.54
ZNF44-201ENST00000354656 UNC13AQ9UPW8 1703 aa24.66■■□□□ 1.54
ZNF44-201ENST00000354656 BICRAQ9NZM4 1560 aa24.45■■□□□ 1.5
ZNF44-201ENST00000354656 MYO15BQ96JP2 1530 aa24.41■■□□□ 1.5
ZNF44-201ENST00000354656 SHROOM4Q9ULL8 1493 aa24.09■■□□□ 1.45
ZNF44-201ENST00000354656 CC2D2AQ9P2K1 1620 aa24.05■■□□□ 1.44
ZNF44-201ENST00000354656 CECR2Q9BXF3 1484 aa24.02■■□□□ 1.44
ZNF44-201ENST00000354656 ZCCHC6Q5VYS8 1495 aaKnown RBP23.96■■□□□ 1.43
ZNF44-201ENST00000354656 DCAF1Q9Y4B6 1507 aa23.94■■□□□ 1.42
ZNF44-201ENST00000354656 EIF4G1Q04637 1599 aaKnown RBP23.9■■□□□ 1.42
ZNF44-201ENST00000354656 SCRIBQ14160 1630 aa23.89■■□□□ 1.42
ZNF44-201ENST00000354656 DNAJC5Q9H3Z4 198 aa23.53■■□□□ 1.36
ZNF44-201ENST00000354656 CUX2O14529 1486 aa23.13■■□□□ 1.29
ZNF44-201ENST00000354656 ERCC6Q03468 1493 aa23.03■■□□□ 1.28
ZNF44-201ENST00000354656 NCAPD3P42695 1498 aa22.96■■□□□ 1.27
ZNF44-201ENST00000354656 ATAD2BQ9ULI0 1458 aa22.84■■□□□ 1.25
ZNF44-201ENST00000354656 HMGXB3Q12766 1538 aa22.79■■□□□ 1.24
ZNF44-201ENST00000354656 SMARCA2P51531 1590 aa22.78■■□□□ 1.24
ZNF44-201ENST00000354656 SMARCA4P51532 1647 aa22.75■■□□□ 1.23
ZNF44-201ENST00000354656 NESP48681 1621 aa22.74■■□□□ 1.23
ZNF44-201ENST00000354656 THOC2Q8NI27 1593 aaKnown RBP22.64■■□□□ 1.22
ZNF44-201ENST00000354656 BAZ1BQ9UIG0 1483 aaKnown RBP22.61■■□□□ 1.21
ZNF44-201ENST00000354656 BAZ1AQ9NRL2 1556 aaPredicted RBP22.57■■□□□ 1.2
ZNF44-201ENST00000354656 LAMC3Q9Y6N6 1575 aa22.56■■□□□ 1.2
ZNF44-201ENST00000354656 PEG3Q9GZU2 1588 aa22.52■■□□□ 1.2
ZNF44-201ENST00000354656 KIF21AQ7Z4S6 1674 aa22.49■■□□□ 1.19
ZNF44-201ENST00000354656 PDS5BQ9NTI5 1447 aa22.4■■□□□ 1.18
ZNF44-201ENST00000354656 MROH2BQ7Z745 1585 aa22.35■■□□□ 1.17
ZNF44-201ENST00000354656 TRIM41Q8WV44 630 aa22.35■■□□□ 1.17
ZNF44-201ENST00000354656 MRC2Q9UBG0 1479 aa22.25■■□□□ 1.15
ZNF44-201ENST00000354656 CADPSQ9ULU8 1353 aa22.24■■□□□ 1.15
ZNF44-201ENST00000354656 WDR62O43379 1518 aa22.22■■□□□ 1.15
ZNF44-201ENST00000354656 CEP164Q9UPV0 1460 aa22.09■■□□□ 1.13
ZNF44-201ENST00000354656 WIZO95785 1651 aa22.08■■□□□ 1.13
ZNF44-201ENST00000354656 FANCD2Q9BXW9 1451 aa22.01■■□□□ 1.11
ZNF44-201ENST00000354656 OSCARQ8IYS5 282 aa21.96■■□□□ 1.11
ZNF44-201ENST00000354656 CFTRP13569 1480 aa21.9■■□□□ 1.1
ZNF44-201ENST00000354656 URB2Q14146 1524 aaKnown RBP21.85■■□□□ 1.09
ZNF44-201ENST00000354656 RIMBP3CA6NJZ7 1639 aa21.78■■□□□ 1.08
ZNF44-201ENST00000354656 RIMBP3BA6NNM3 1639 aa21.78■■□□□ 1.08
ZNF44-201ENST00000354656 RIMBP3Q9UFD9 1639 aa21.78■■□□□ 1.08
ZNF44-201ENST00000354656 TOP2AP11388 1531 aaKnown RBP21.77■■□□□ 1.08
ZNF44-201ENST00000354656 PRDM2Q13029 1718 aa21.75■■□□□ 1.07
ZNF44-201ENST00000354656 RSF1Q96T23 1441 aaPredicted RBP21.74■■□□□ 1.07
ZNF44-201ENST00000354656 ARHGEF11O15085 1522 aa21.65■■□□□ 1.06
ZNF44-201ENST00000354656 IFT140Q96RY7 1462 aa21.65■■□□□ 1.06
ZNF44-201ENST00000354656 ZNF608Q9ULD9 1512 aaPredicted RBP21.65■■□□□ 1.06
ZNF44-201ENST00000354656 EIF4G3O43432 1585 aaKnown RBP21.56■■□□□ 1.04
ZNF44-201ENST00000354656 TOPBP1Q92547 1522 aa21.55■■□□□ 1.04
ZNF44-201ENST00000354656 CCDC88BA6NC98 1476 aa21.5■■□□□ 1.03
ZNF44-201ENST00000354656 CHD1O14646 1710 aa21.49■■□□□ 1.03
ZNF44-201ENST00000354656 ABCC8Q09428 1581 aa21.48■■□□□ 1.03
ZNF44-201ENST00000354656 CYB5RLQ6IPT4 315 aa21.48■■□□□ 1.03
ZNF44-201ENST00000354656 DNMBPQ6XZF7 1577 aa21.45■■□□□ 1.02
ZNF44-201ENST00000354656 TARBP1Q13395 1621 aaKnown RBP21.4■■□□□ 1.02
ZNF44-201ENST00000354656 ARAP1Q96P48 1450 aa21.4■■□□□ 1.02
ZNF44-201ENST00000354656 TRHP20396 242 aaPredicted RBP21.39■■□□□ 1.01
ZNF44-201ENST00000354656 AQRO60306 1485 aaKnown RBP eCLIP21.39■■□□□ 1.01
ZNF44-201ENST00000354656 FBLN2P98095 1184 aa21.33■■□□□ 1.01
ZNF44-201ENST00000354656 POLA1P09884 1462 aaPredicted RBP21.3■■□□□ 1
ZNF44-201ENST00000354656 RAD54L2Q9Y4B4 1467 aa21.21■□□□□ 0.99
ZNF44-201ENST00000354656 CLASP1Q7Z460 1538 aa21.19■□□□□ 0.98
ZNF44-201ENST00000354656 SNAPC4Q5SXM2 1469 aa21.19■□□□□ 0.98
ZNF44-201ENST00000354656 WDR97A6NE52 1622 aa21.18■□□□□ 0.98
ZNF44-201ENST00000354656 TDRD9Q8NDG6 1382 aaKnown RBP21.18■□□□□ 0.98
ZNF44-201ENST00000354656 SOGA1O94964 1423 aa21.18■□□□□ 0.98
ZNF44-201ENST00000354656 SYNJ1O43426 1573 aa21.16■□□□□ 0.98
ZNF44-201ENST00000354656 FGD5Q6ZNL6 1462 aa21.11■□□□□ 0.97
ZNF44-201ENST00000354656 MAGI1Q96QZ7 1491 aaPredicted RBP21.11■□□□□ 0.97
ZNF44-201ENST00000354656 CHMP7Q8WUX9 453 aaPredicted RBP21.1■□□□□ 0.97
ZNF44-201ENST00000354656 AEBP2Q6ZN18 517 aaPredicted RBP21.08■□□□□ 0.97
ZNF44-201ENST00000354656 GRIN2BQ13224 1484 aa21.06■□□□□ 0.96
ZNF44-201ENST00000354656 SYNJ2O15056 1496 aa21.04■□□□□ 0.96
ZNF44-201ENST00000354656 SUPT5HO00267 1087 aaKnown RBP21.03■□□□□ 0.96
ZNF44-201ENST00000354656 CUX1P39880 1505 aa21.02■□□□□ 0.96
ZNF44-201ENST00000354656 PBRM1Q86U86 1689 aa21.01■□□□□ 0.95
ZNF44-201ENST00000354656 GAPVD1Q14C86 1478 aa20.98■□□□□ 0.95
ZNF44-201ENST00000354656 ABCA5Q8WWZ7 1642 aa20.89■□□□□ 0.93
ZNF44-201ENST00000354656 ABCA10Q8WWZ4 1543 aa20.84■□□□□ 0.93
ZNF44-201ENST00000354656 ERCC6L2Q5T890 1561 aa20.82■□□□□ 0.92
ZNF44-201ENST00000354656 GRIN2AQ12879 1464 aa20.8■□□□□ 0.92
ZNF44-201ENST00000354656 CEP170Q5SW79 1584 aa20.76■□□□□ 0.91
ZNF44-201ENST00000354656 ADAMTS12P58397 1594 aa20.76■□□□□ 0.91
ZNF44-201ENST00000354656 NUP160Q12769 1436 aa20.73■□□□□ 0.91
ZNF44-201ENST00000354656 SHROOM2Q13796 1616 aa20.71■□□□□ 0.91
ZNF44-201ENST00000354656 KIF13AQ9H1H9 1805 aa20.69■□□□□ 0.9
ZNF44-201ENST00000354656 WRNQ14191 1432 aaPredicted RBP eCLIP20.67■□□□□ 0.9
ZNF44-201ENST00000354656 FHAD1B1AJZ9 1412 aa20.64■□□□□ 0.89
ZNF44-201ENST00000354656 BIVM-ERCC5R4GMW8 1640 aa20.62■□□□□ 0.89
ZNF44-201ENST00000354656 TOP2BQ02880 1626 aa20.6■□□□□ 0.89
ZNF44-201ENST00000354656 ERICH3Q5RHP9 1530 aa20.58■□□□□ 0.89
ZNF44-201ENST00000354656 PRG4Q92954 1404 aaPredicted RBP20.55■□□□□ 0.88
ZNF44-201ENST00000354656 ABCC10Q5T3U5 1492 aa20.5■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms